Oryzias latipes (Japanese medaka): 101161970
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Entry
101161970 CDS
T02443
Name
(RefSeq) DNA-binding protein RFX7 isoform X1
KO
K09175
DNA-binding protein RFX7
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101161970
Transcription factors [BR:
ola03000
]
Eukaryotic type
Other basic domains
RF-X
101161970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
101161970
NCBI-ProteinID:
XP_011474320
UniProt:
A0A3B3HG72
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All DBs
Position
6:15305631..15320266
Genome browser
AA seq
1461 aa
AA seq
DB search
MADDQQQPGQKPASGLGSLPALVPGLQGSEANALQFKIKNSICKSVQSKVDGILQDVEKF
TDIEKLYLYLKLPSGPSSGNDKREGTSTPGLCDQSSMSSSRTQQMYAFNWIRNHLEEHPE
TSLPKQEVYDEYKSYCDNLGYNPLSAADFGKIMKNVFPNMKARRLGMRGKSKYCYSGLRK
KAFVHMPSLPNLDLQKSGDGCELMEPTGQSPSAEDEMRSAACGLVCEWAQKVLSRQFDSV
EDLARFLLNSHYIGTKSMAALTVMTGTPTGIKTPTPASAFVPTAEANSFQPQVKTLPSPS
VDAKQQLQRKIQKKQQEQKLHSPLPTGESQVKRTEASTPGPTIPCGSPALLSPQPTIGIV
VAAVPSPVTVQRNRQLMTSPSPVGTAEGKVLPVNFQVVTQSLKQSPKTPQNIPASPVGDR
LARHGTRYAQILPKPSATSAITLRSPPTLLITNSPIKTVMPNPHVSSVNVVKMTAIALAP
SNSSSNGNNSTVRPASAGVSAATVSDDSQHLQSASSAATQPSLVRPGATTSSAALSSDNK
GGSEVGIDNSSISVAEKHAVGAKEERVAKFRAASEPTFLVKCPPGAEKGIRIKHDAISSP
TSISVIGTLDSNNSNCQDSTLYLTVDNHNSNGNASSHGSAAVIQTSSDPCSDAKSPRKRT
AAESHAIPVKRVFISQQPLATIDNPKPGVGAAVKRIPRPGTPARPESAPCKGTAKHTPVG
PTQILALTDAPIAHTEGTPTVVKQQSMMVKHEDHSISADSSASDQALLQHITGDSRAIPT
NSGPHEASAMSDLKSTIWETQQIPAEHKQPPPDQISMITQPSEASRQLTLAQEMVDFPGT
QTSMEYFPFNDDDMTQDSIVEELVQMEEQMKLKGLFGSCGDVSLPGQSTNNQGSILSAHQ
ASATFYHSAHSSTTPVQTPTPTPTPTPTPTSEMTLAHSLTRESPCSRMAPVTPVDGAMGR
HTPISTPLSNCSSSVPPSPVECRNPFAFTPINSSITGYHDASIVSSSPVKPMQRPMATHP
DKAKLEWINNRYNSNSVGPLSNHSISILPSYQDLVDDQFRKPHAFAIPGQSFQSQSRQDA
TVLGRLTPISPVQQQQLVTSVTTPTKEESFAVPAPLDNKASTSSTSSTFRCRSVSPAVRQ
RNFSGNTAPQPTTTSTTMTTRAVVSPFNSPITSEVLNILSNSQTVGSVHCMVQRSQSVPL
NIMMQSEMLPVQAQSNTTKITNVLLSKMDAEGDDSVRGLGINNLPSNYTARMNLTQILET
TPGFAGGTAHQTSLPVSSSPAAFELQQHGYLTTGSGEQVSFSTEDNQAQAGPGEQDQQQL
QQDPVQTRPQLLLQSTQQQEAEDEQQQLNFNNTVKDLLGEDGLNPSSQLVGQVASELNAV
ASDFSNEIRLTSDLSSSITDLNTLDTNLLFDPNQQQEQYEDSTLEELKNDPLFQQICSDT
VNSGFDWLESKDQPTTVEMLG
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatcaacaacaacctggtcagaagcctgcctcgggattaggctctcttcca
gcgctcgtgccaggactccagggatccgaggccaacgcgttacagttcaaaataaagaat
tcaatttgcaaatctgtacaatcaaaagtggacggcatactgcaagatgttgagaagttt
acagacatcgaaaaactctacctctaccttaagttgccttctggtcccagcagtggcaat
gataaaagagaggggacctccactccaggattatgtgatcagagttccatgtcatcaagt
cgcactcaacagatgtatgcgttcaactggatacgcaatcacctggaggagcacccagag
acatcgctcccaaagcaagaggtgtatgatgaatacaagagctattgtgacaatctcggc
tacaatccactgagtgctgcagactttgggaagataatgaagaacgtctttccgaacatg
aaggcacgtcgactgggaatgaggggaaaatccaaatactgttatagcgggttaaggaag
aaagcttttgttcacatgccatccctacccaatctggatctacagaaatctggggatggg
tgtgagctgatggagccaacaggccagtctccaagcgctgaggatgaaatgagatctgca
gcatgtggactggtgtgcgagtgggctcagaaagtcctgagtcgacagtttgatagcgtg
gaggacttagcccgctttcttcttaatagccactacattggtactaagtccatggctgca
cttactgttatgactggaacccccacagggattaagactccaactccagcctctgcgttt
gtgcccactgctgaggccaactcattccagccccaggtgaagaccctgccttcaccgtct
gttgatgcaaaacagcaactccaacgcaaaatccagaaaaagcagcaggagcagaagctt
cactcacccctgcctacaggggagtcacaagtcaagcgaacagaggccagtacccccggg
cccaccatcccctgtggcagcccagctctgctttcccctcagcccaccataggaattgta
gttgcggctgttcctagcccagtgacggtacagagaaacaggcagttaatgacctcacct
agtcctgtaggaaccgcagaaggcaaagtgttgcctgtgaatttccaagttgtcactcaa
tctctcaaacagtctcccaaaaccccacaaaacatccctgccagtcctgttggtgaccgc
ctggcaagacacggcacacggtacgcccaaatcctacccaagccctctgccaccagtgcc
atcacactgcgctctcccccgacgctgctgatcaccaacagccccattaaaactgtgatg
cccaatccccatgtcagctcggtcaatgtggtgaagatgacagccatcgctttggcacca
agtaatagcagtagtaacggcaacaactcaacggtgcgaccggcctcagctggtgtgagt
gctgcaactgtttcagatgattcccagcatttgcagagtgcgagctctgctgccacacag
ccttctttagtcagacctggtgccacaacatcatccgcagccctttcctctgacaacaaa
ggcgggtctgaagtcggcattgacaatagctccatatctgttgcagaaaagcatgctgtc
ggagctaaagaggaaagagtggctaagttcagagctgccagtgaaccaactttcctcgtt
aagtgtcctcctggagcagaaaaggggattaggataaaacacgatgccatatcctctccc
acctccatatctgtaattggaactctagacagcaataacagcaactgccaagacagtact
ttgtacttgactgttgataatcacaactccaatggaaacgcatcctctcacggctctgct
gcggttatccagacatcgagtgatccctgctcagatgctaagagccctagaaagcgcaca
gctgcagaatcccatgctattcctgtaaagagagtgtttatttcacaacagccacttgct
acaattgacaatcccaaacctggggtgggtgctgcagtgaagaggattcccagaccagga
accccagctagaccagagagtgccccctgtaaagggacagcaaaacacacacctgtaggg
cccacacagatccttgcactcactgacgcgcccatcgctcacacagagggaactccgact
gtcgtcaaacagcaaagtatgatggtgaaacatgaagatcactccatcagtgctgacagc
agtgcctctgatcaggcgttgctgcagcacatcactggggactcccgtgccataccaacc
aactcaggaccacacgaagcctctgcgatgagtgatttaaagagcacaatatgggagaca
cagcagataccagcagaacacaagcaaccccctcctgaccaaatttctatgataactcaa
ccttctgaggcctcccgtcagctcaccctcgcacaggagatggtggactttccaggcact
cagacgagcatggagtacttcccattcaacgatgacgacatgactcaagacagcatagtg
gaggagctagtccaaatggaggagcagatgaagctgaaaggtctttttggtagctgtggc
gatgtctccctgccaggtcagtcaaccaacaaccaaggctccatcctcagtgctcaccag
gccagtgctaccttctaccactctgctcacagcagcacgactcctgttcaaactcccact
ccaacaccaaccccaacacccacccccacctccgaaatgacactcgcacacagcctgact
agagaaagcccatgctcccgtatggccccggttaccccagtagatggagccatgggtcgc
cacacccccatcagcacaccgctttctaactgcagcagcagcgtacccccaagtccagtg
gagtgcaggaacccgtttgctttcactcccattaactcaagcatcactgggtaccatgat
gcaagtatcgtctcaagcagtcctgttaagcccatgcaaagacccatggcaacacacccc
gacaaggccaagctggaatggatcaataaccgctacaacagcaactctgtaggcccgttg
tccaaccacagcatcagtattctacccagctatcaagacttggttgatgatcagttccgc
aaaccacatgcattcgcgattcccggccagtcatttcagtctcagtcaagacaggacgca
actgttttgggccgcttgactcccatttctcctgtgcagcaacagcaactggtgacaagt
gttaccactcctacaaaagaggagagctttgctgtgcctgcaccattggacaacaaggcc
tcaacatcatctacatccagtacttttcgttgccgtagtgttagcccagcagtgcgacag
cgaaatttcagtggcaacaccgcccctcagcccaccaccacaagtacaacaatgacaact
cgagctgtagtctcaccctttaactcccccatcacctctgaggtgctcaatatcctgtcc
aacagccagacagtcggctctgtgcactgcatggtccagcgtagccagtctgtgcctcta
aacatcatgatgcaaagcgagatgcttcccgtgcaggctcagagcaacaccaccaagatc
acaaatgtacttctcagcaagatggacgcagagggagatgattcagtccgtggtctgggt
ataaacaacctcccctctaactacacagctcgtatgaatctcacgcagatcctggagact
actcctgggtttgcaggaggaaccgctcaccagacttcgctgcccgtcagctccagtcct
gctgctttcgagctccagcagcatggctacctcaccactggcagtggagagcaggtgagt
ttctctactgaagacaaccaagcacaagcgggtcctggtgaacaagaccagcagcagctc
caacaggatcctgtgcagacacgaccacaactcctcctccagagcacacagcagcaggag
gcagaggacgaacaacaacagctcaatttcaacaacactgtcaaggacttgctgggggag
gatggcctcaaccccagctcccagttggtaggccaggtagcttcagagctcaacgctgtg
gcatcagacttctcaaatgaaatcagactgacctcagatctgtccagtagcatcactgac
cttaacacgctggacaccaacttgctgtttgatcccaatcagcagcaggaacaatatgaa
gactctacactggaagaactgaagaacgacccgctttttcagcagatatgcagtgatact
gtgaactctggttttgactggctagaaagcaaagaccagccgactacagtagagatgctg
ggctaa
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