Oryzias latipes (Japanese medaka): 101162014
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Entry
101162014 CDS
T02443
Symbol
rars2
Name
(RefSeq) probable arginine--tRNA ligase, mitochondrial
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101162014 (rars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ola01007
]
101162014 (rars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ola03016
]
101162014 (rars2)
03029 Mitochondrial biogenesis [BR:
ola03029
]
101162014 (rars2)
Enzymes [BR:
ola01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
101162014 (rars2)
Amino acid related enzymes [BR:
ola01007
]
Aminoacyl-tRNA synthetase
Class I (G)
101162014 (rars2)
Transfer RNA biogenesis [BR:
ola03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
101162014 (rars2)
Prokaryotic type
Other AARSs
101162014 (rars2)
Mitochondrial biogenesis [BR:
ola03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
101162014 (rars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
RQC
tRNA-synt_1g
Motif
Other DBs
NCBI-GeneID:
101162014
NCBI-ProteinID:
XP_004083463
UniProt:
H2M771
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All DBs
Position
24:complement(5061447..5068694)
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AA seq
579 aa
AA seq
DB search
MACFFRRTIAAKLGRTLQHPEDVFIPAITAMPVLKKQQSPDFRLSVSTLRTNGILPSNGD
IQLQTESLAKQLMRDGVVEVISAGKGVINFQVNRELLAEKVLEPFGKGEDDKYGLSSDLL
TSLKRGTTLVEYSSPNIAKKFHAGHLRSTIIGNFVANLKESLGNSVVRMNYLGDWGMQFG
LLGAGFEKFGSAEKLKENPLHHLFEVYVRVNKEAEQDEALKHAARDFFRQLEQHDDEAVS
LWRQFREISVQEYRDIYKRLGVHFDVYSGESFHRDQAQEVVRQLQNRGLLKTSEKGTGIL
DLSPEGDPSNVCTVLRSDGTTLYITRDVAAAINRKEKYSFDEMIYVTDKSQANHFSQLFQ
ILGAMGHPWADRCRHLPFGLVQGMKTRTGDVVFLEDVLDEARARMLHNMSQSHTTKELED
PEDTAEKVGICALIVQDFKGPLLSDYKFDWVRMLQAQGDTGVFLQYTHARLCSLLRTNKG
VDEGEFNPSLLREVTSTNVLQHLLRYDEVLLQASQDLQPKHLVNFLLKLSHFIASAHRDL
PVKGSPPDVAQARLRLFRGACSVLATGMRILGVTPVQKM
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcatgtttctttagaagaacaattgcagcgaagctcgggcggacgctgcagcacccc
gaggatgtgtttattccagctataaccgccatgccagttttgaagaagcaacagtctcca
gacttccggctgtcagtcagcacattacggaccaacgggatcctgccatcaaatggagac
attcagctgcaaacagaaagcctggctaagcagctgatgcgagacggcgtggtggaagtc
atctctgctggaaaaggagtgatcaactttcaagtaaaccgtgagcttcttgcagagaaa
gtgttggagccgttcggtaaaggggaggatgacaagtacgggttaagcagcgaccttttg
acttccctgaaaagaggaaccacattagtggagtacagctctccaaatatcgccaagaaa
ttccacgctggacacttgcgctccacaattattggaaactttgtggctaacttaaaagaa
tcgcttggaaactctgtcgtccggatgaactaccttggagactggggcatgcagtttggg
ttactcggagccggttttgagaagtttggatccgctgaaaaactaaaagagaatcctctt
catcatttgtttgaggtttatgtccgagtgaacaaggaagcggagcaagatgaagctttg
aagcacgccgccagggacttctttagacagctggagcagcatgacgacgaggcggtgtcg
ctgtggcgacagttcagagagatctctgtccaggagtatcgggacatttacaagcggtta
ggggtccactttgacgtctacagcggggagtcttttcaccgagaccaggcccaggaggtg
gtgcggcagctgcagaaccgagggctgctgaaaacctccgaaaaagggacggggatactg
gacctctctcctgaaggagacccgagtaacgtctgcactgttctccgcagtgacgggacg
accctctacatcaccagagacgtcgctgctgccataaaccgaaaagaaaagtattccttt
gatgaaatgatttatgtgactgacaaaagccaggcgaatcacttcagccagctgttccag
attctgggtgctatgggtcatccttgggccgacaggtgtcggcacttgccctttggcctg
gttcagggcatgaagaccaggactggcgacgtggtgttcctggaggacgtgctggatgag
gctcgggccaggatgctccacaacatgagccagtcacacacgacaaaggagctggaggat
ccagaagacacggcggaaaaagtgggaatctgtgctctgatagtccaggatttcaaaggt
ccgctgctgagcgattataagttcgattgggtgcggatgttacaggctcagggcgacacc
ggcgtcttcctccagtacacgcacgcccgactctgcagtttattgaggacaaataaaggt
gtggatgaaggtgaattcaacccctcccttttacgggaggtgacgagcaccaacgtcctg
cagcacctccttcgctacgatgaggtgctgctgcaggcatctcaggatctgcagcccaaa
catctggtgaactttttactgaagctgagccacttcattgcttcagcacacagagatctg
cccgtgaaaggaagcccgccggatgtcgctcaggcgaggttacgcctcttcaggggggcc
tgctccgtcctggccactgggatgcggatccttggcgtcacgcccgtacaaaaaatgtga
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