Oryzias latipes (Japanese medaka): 101162025 Help Entry 101162025         CDS       T02443                                  Symbol aptx Name (RefSeq) aprataxin isoform X1   KO K10863   aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] Organism ola  Oryzias latipes (Japanese medaka) Pathway ola03410   Base excision repair Brite KEGG Orthology (KO) [BR:ola00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     101162025 (aptx)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ola03400]     101162025 (aptx) Enzymes [BR:ola01000]  3. Hydrolases   3.6  Acting on acid anhydrides    3.6.1  In phosphorus-containing anhydrides     3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase      101162025 (aptx)     3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase      101162025 (aptx)     3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase      101162025 (aptx) DNA repair and recombination proteins [BR:ola03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Other BER factors      101162025 (aptx)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Other NHEJ factors      101162025 (aptx) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DcpS_C FHA_2 zf-C2HE HIT FHA zf-C2H2_6 Motif Other DBs NCBI-GeneID:  101162025 NCBI-ProteinID:  XP_004065926 UniProt:  H2LP58 LinkDB All DBs Position 1:complement(15249810..15252814) Genome browser AA seq 333 aa AA seqDB search MPICWLISEEGNHKPIHLPHLQTVVVGRGPETTIKDKKCSRHQVELKAECNKGYVKVKQL GLNPTSVGSLVVGKGNEVKMKPGEQLLVVNSLYPYTVQFKEDTTGSQGATKRPPEPVKEN GGSQRETDCLKAGQLTEKVAAAVIPGEATKTSGISGHWSQGLKTSMQDPKMQIYKDDTVV VIKDKYPKARYHWLVLPWQSIPSLKALKAEHCDLLKHMQKVAERMIKQCPESSSLSFRTG YHAIPSMSHIHLHVISQDFDSPCLKNKKHWNSFTTDYFIDSENVIQMLEKDGSVSVKDGT SELLKLPLQCHVCHKECPTIPALKEHLKHHLSK NT seq 1002 nt NT seq  +upstreamnt  +downstreamnt atgcccatttgctggctcattagtgaagaggggaatcacaaacccattcacctgcctcat ttacagacagttgtcgtgggtcgaggcccagaaactactatcaaagacaaaaaatgctcc cggcatcaagttgaactgaaagctgaatgcaacaaaggttatgtcaaagtgaagcagctg gggttaaaccccacctctgtcggctccttggtggtgggtaaaggcaatgaggtcaaaatg aagcctggagagcagctgctcgtggtcaacagcctttatccatacaccgtgcagttcaaa gaggacaccaccgggagccagggcgccaccaaaagaccaccagagccagtcaaagagaat ggaggaagccaaagagagacagactgcctgaaagctggacaactcacagaaaaagtcgct gcagctgtcattccaggagaagccacaaaaactagtggaatttctgggcattggagtcaa ggcttgaaaacttcaatgcaagaccccaaaatgcagatatacaaggacgatacagttgta gtgatcaaagacaagtatcccaaagctcgttaccactggctggttcttccatggcagtcg attcccagcctgaaggctttgaaggcagaacactgcgatctgctgaaacacatgcagaag gtggctgagcgcatgattaagcaatgtccagaatccagctcacttagcttccggactggt tatcacgccatcccaagcatgagtcacatccacctccacgtgatcagtcaagactttgac tctccttgtttgaagaacaagaagcattggaattcctttaccacagattacttcatagat tctgaaaatgtcattcagatgcttgaaaaggatgggagcgtctctgtgaaggatgggact agtgagctgttgaaattgcctctccaatgtcacgtgtgtcacaaagagtgtcccaccatt cctgccctgaaagagcacctgaagcaccacctctctaaataa

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