Oryzias latipes (Japanese medaka): 101162064
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Entry
101162064 CDS
T02443
Symbol
smg8
Name
(RefSeq) protein SMG8
KO
K18734
protein SMG8
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101162064 (smg8)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
101162064 (smg8)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
DUF2794
Motif
Other DBs
NCBI-GeneID:
101162064
NCBI-ProteinID:
XP_004076871
UniProt:
H2MGV8
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All DBs
Position
14:complement(24761331..24769337)
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AA seq
921 aa
AA seq
DB search
MMKESGMSVPVSVGTLLQADLQEDPAYRDDGLCVVGVFGKSNMQSGPLKESLLNTLADKN
IFPMFGEAEDGGSADSLIQAFYDQENRVLYLHLSSVCDSRQLLRACRSVGADTSHSDAHD
FWKGLERQHCLHLLYLFSVCHILLMVHPNQTFDVTYDRLFRAMDALRQKVLPLIRAAIKD
CPVSKEWKLNCRPCPPRLLFVFQMNGTLKISNSPESGGNPDKPKKHSPRRRLQHALEDQI
YRIFRKSRVLTNQSSNCLFTVPANQAFVYVIPTADEDPVSTLLTQLRSNCILTDQEPSVT
ISGPRKYQQMRRSARQLGGGGDAGGLSVVSQLVDCSLKEFLWQHVELVQTKKGFDDSVGR
NPQPSHFELPNYTKWASVASKLHHVLISNTDEEMAELAAKVQSQLKVLDGFLDADSKFSE
NRCQKALPLAHSAYQSNLPHNYTTTVHKNQLTQALRVYSQHARGVAFQRYALQLHEDCYK
FWSNGHQLCEERSLTDQHCVHKFHLLPQPDEKPDVDHNPPILNHNSRGRSTSSCNCGRKQ
APREDPFDVQAANYDFYQMLEEKCCGKLERIDFPVFQPSTPDPAPASNQAQQASCEGSGD
ADRPKEPSSAQSHTPGDASLSLALSLGRSTDSLEPYGDGDGPEKQGQPKRPSLIDRQPST
VEYLPGMMHSGCPKGLLPKFSSWSLVKLGPAKSYNCHTGLEQPGFLPGSSFLLPWDLVIR
SRSDEDAGLSEPLDGGASSWPAPNKSLIGKRGSTGGLGRSRRRDDMARVFVGFEYEDSRG
RRFISCGPDKIVKVMGPGGAKDPATRVLNTDMPLYIPSPSQGRGLKPHFAQLTRLFVVVP
DAPLEVTLNPQVQPGPPPCPVFHPEQTDIVLPPDGLWVLRFPFSYVTDCGPCFPPKENQP
LSNYKVLRGILRAATSNPAPQ
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaggagtccgggatgtctgtgccggtctcagtggggactctgctgcaggctgac
ctccaggaggaccccgcttaccgggacgacggcctgtgtgtggtcggtgtttttgggaag
agcaacatgcaaagcgggccgctgaaagagtctttgctcaacacgctggcggacaaaaac
atcttcccgatgttcggcgaagcggaggatggcggctcggcggacagcctcatccaggcg
ttttacgaccaggagaaccgggtcctgtacctgcatctctcctccgtgtgcgacagccgc
cagctgctccgggcctgtcggtctgtgggcgccgacaccagccactccgacgcccacgac
ttctggaaaggcctggaacgacagcactgcctgcatctgctgtacttgttctccgtgtgc
cacatccttctaatggttcatcccaaccagaccttcgacgtgacctacgaccggctcttc
agggccatggacgcgctgcggcagaaggtgctgccgctgatccgggcagccatcaaagac
tgcccggtgtccaaggagtggaagctgaactgcaggccctgccccccgcgcctgctcttt
gtcttccagatgaacggaaccctaaagatctccaacagcccagagtctggaggaaaccct
gacaaacccaagaagcactctcctcggcggcgcctgcagcacgctctggaggaccagatc
tatcgcatcttccggaaaagcagagtcctgaccaaccagagcagcaactgtctgttcact
gttcccgccaaccaggcgtttgtgtatgtgattcccacagcagacgaggatccggtgagc
accttgctcacccagctgcggtctaactgcatcttaactgaccaggaacccagcgtgacc
atatctggaccgaggaagtaccaacagatgcggcgctcggctcggcagctcggcggcggt
ggagacgctggcggtctgtcggttgtcagtcagctggtggactgcagcctgaaggagttc
ctgtggcagcacgtagagctggtgcagaccaagaaaggatttgacgacagcgtgggtcga
aacccacagccctcgcactttgagctgccaaactacaccaaatgggccagtgtggcgtcc
aaactccatcacgtcttgatcagcaacacggacgaagaaatggccgaactggctgctaaa
gtgcaaagccagttgaaggttctggatgggtttctcgacgctgactcaaaattctctgag
aaccggtgtcagaaagctctgccgctggctcacagtgcgtaccagtccaacctcccccat
aactacaccacaacagtgcacaaaaaccagctgacgcaggccctgcgggtgtacagccag
catgcgcggggcgtggccttccagcgctacgctctgcagcttcacgaagactgctacaag
ttctggagcaacggccaccagctgtgtgaggagaggagcctgacggaccaacactgcgtt
cacaagttccacctgctgcctcaaccagacgagaagccagacgtggatcacaaccctccc
atcctgaaccacaacagcagggggcgctccacctccagctgtaactgcggccggaagcag
gctcctcgagaagatcccttcgacgttcaggccgccaattacgacttctaccagatgctg
gaggagaaatgctgcgggaagctggagaggattgactttccggtcttccagcccagcact
cccgatccggcgcccgccagcaaccaggcccagcaggcctcctgtgaggggtctggtgat
gcggatcggccaaaggagcccagctcagcgcagagccacacccccggagacgccagcctc
agcctggctttaagtctgggtcggtccacggacagcctggagccctacggggacggagat
ggccccgaaaagcagggccagccgaagaggccgagcctcattgatcgccagccttcaact
gtggagtacctccctggcatgatgcactctggctgcccgaagggtctcctccccaagttc
tccagctggtcgctagtcaagctgggcccggccaagtcgtacaactgccacacgggtctg
gagcagcccggcttcctccccggctcctccttcctcctgccgtgggatttggtgatccga
tctcgatcagacgaggatgcgggactctctgagcctttggacgggggcgcctcctcgtgg
ccagctcctaacaaaagcctcattgggaaacgggggagcactggaggccttggcaggagc
cgcaggagggacgacatggcccgggtctttgtgggattcgagtacgaggacagcaggggg
cgccgcttcatcagctgcggacctgataaaatagtgaaggtgatggggccggggggcgcc
aaagatcccgccacacgggttttgaacacagacatgccgttgtacatcccctccccctcc
caggggcgaggcctgaagccgcactttgctcagctgactcgcctttttgtcgtcgtgccg
gacgcgccgctggaggtcactctgaacccccaggtgcagcccggtcctcctccctgtccc
gtcttccatccagagcaaacggacatcgtgttgccgcccgacggcctctgggtgctgcgc
ttcccgttttcctatgtgacggactgcggcccctgcttcccccccaaagaaaaccagccg
ctcagcaactacaaggtgctgcggggcatcctgagggccgccacatctaatcctgcccca
cagtga
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