Oryzias latipes (Japanese medaka): 101162100
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Entry
101162100 CDS
T02443
Symbol
pdgfb
Name
(RefSeq) platelet-derived growth factor subunit B
KO
K17386
platelet-derived growth factor subunit B
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04010
MAPK signaling pathway
ola04020
Calcium signaling pathway
ola04510
Focal adhesion
ola04540
Gap junction
ola04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101162100 (pdgfb)
04020 Calcium signaling pathway
101162100 (pdgfb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101162100 (pdgfb)
04540 Gap junction
101162100 (pdgfb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
101162100 (pdgfb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ola04052
]
101162100 (pdgfb)
00536 Glycosaminoglycan binding proteins [BR:
ola00536
]
101162100 (pdgfb)
Cytokines and neuropeptides [BR:
ola04052
]
Cytokines
Growth factors (RTK binding)
101162100 (pdgfb)
Glycosaminoglycan binding proteins [BR:
ola00536
]
Heparan sulfate / Heparin
Growth factors/receptors
101162100 (pdgfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
Motif
Other DBs
NCBI-GeneID:
101162100
NCBI-ProteinID:
XP_004066160
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All DBs
Position
1:complement(24539831..24561323)
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AA seq
553 aa
AA seq
DB search
MRSWVLLLLLAAILTTLSQLGSAEGDPLPPSLVDLVRNSPISSVDDLKLLLQQETSEIED
EEDEHDTLPDPTHARFVRSLSEAQPAQQAVCKVRTEVMEITRSMLDRRNTNFMLWPPCVE
VQRCSGCCNTRQLQCVPVVTSSRYLQVIKIQYINRKAHYEKAIISVEDHVSCRCQTASSD
ISRFTVQSNPSPLAPPLQQPPPSFHHPLSPPRSAHPPSSKTHTSKADLHRHDDLKHNQQH
YNSEERDPVARQWHQGSYTQLVRWSQPRVHHATMHALPGVHQTTTSMNKSWPSEAMGEHR
IMGSPPQPGHGSGYDGSKEEGGQPEFNSDVHYPDHASRRLQLLQHQQRQQYQDHQSQYPQ
DHSYLGAQYQELTTQIRLSSLQSDSASPFSPTQAPSFGWKSSHPPTTHQKDSVTIQKTAQ
VTHYKQTETEGIIQKEGRAESGSTNSGDSVGAELTNHGKEKDSKMSIEEGRLTEEERRQK
LLEIVQKEPDKPSLLHLPHFQQRPKPTTLKTALPTAAPMLASARPAPFRPASPRRRRKHR
KRISKAAMRAMIM
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcttgggtcctgctgctgctgctggctgcgattttaacgaccctgtcgcagctc
gggagcgctgagggtgatccactccctccatcccttgttgacctggtgagaaattctccc
atctcctctgtagacgacctgaagctgctgttgcagcaggagacgagtgaaatagaggat
gaagaggacgagcatgatactcttccagaccccacacatgctcgattcgttcgcagcctc
tctgaggcacagccagcacagcaagcagtctgcaaagtccgaacagaggtgatggagata
acaaggtcaatgctggaccgccgcaacaccaatttcatgctgtggcccccgtgtgtagag
gtgcagagatgttcgggttgctgcaacactaggcagctgcagtgcgttcctgttgttacc
tccagcagatacctgcaggtaataaagatccaatacataaaccgaaaggcccactatgaa
aaagccatcatctcagtggaggatcatgtcagctgtaggtgtcagactgcctcttcagac
atctctcgcttcaccgttcagagcaaccccagtcctctggcacctccactacaacaaccg
ccgccatccttccaccatccgctctctcctccccggtcagctcaccctccatcatctaag
actcacacctccaaggctgacctccatcgccatgatgacctaaagcacaaccagcaacat
tacaactctgaggagcgtgatccagtagcgaggcaatggcatcaaggaagttacactcag
ctggtgcgctggtcgcaacccagagtgcatcatgccacaatgcacgcgctgccgggagtg
caccaaaccacaactagtatgaacaaaagctggccatctgaagcaatgggagagcataga
atcatgggaagccccccacagccaggacatggtagtggctatgatgggagcaaggaggag
ggtggccagcctgaattcaacagtgatgtgcattatcctgaccatgcatcgaggcggctg
cagctgttgcagcatcagcagagacagcagtatcaggatcatcaatcccagtatccacaa
gatcacagctatctaggagcacaataccaagagttaacaacacaaatcagactcagttct
ttgcagtcagacagcgcttcacctttcagcccaacccaggcacccagttttggatggaaa
tcctcacatcctccaactactcatcaaaaagattcagtgaccatccaaaaaactgcacag
gtcacacattacaaacagactgagactgaaggaatcattcagaaagaaggaagggcggaa
agtgggtcaactaatagtggagattcagtcggggcagagttgaccaatcatgggaaagag
aaagactctaaaatgagcattgaggaaggtcgtttaacagaagaagagaggagacaaaaa
cttctggaaatagtacagaaggagccagataaaccttctcttctccatctaccacatttt
caacaaagaccaaagccaaccacattgaaaacagcattaccaactgcagctcccatgttg
gcatcagctcgtccggcgccatttcgacctgcttcacctcgtcgcagaagaaaacaccgc
aaacgcatcagcaaggccgctatgagagctatgatcatgtag
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