Oryzias latipes (Japanese medaka): 101162104
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Entry
101162104 CDS
T02443
Name
(RefSeq) amyloid-beta A4 protein isoform X1
KO
K04520
amyloid beta A4 protein
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101162104
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ola01002
]
101162104
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ola00535
]
101162104
00536 Glycosaminoglycan binding proteins [BR:
ola00536
]
101162104
Peptidases and inhibitors [BR:
ola01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
101162104
Proteoglycans [BR:
ola00535
]
Cell surface proteoglycans
Others
101162104
Glycosaminoglycan binding proteins [BR:
ola00536
]
Heparan sulfate / Heparin
Others
101162104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
FUSC
Motif
Other DBs
NCBI-GeneID:
101162104
NCBI-ProteinID:
XP_023821649
LinkDB
All DBs
Position
2:21853076..21897791
Genome browser
AA seq
805 aa
AA seq
DB search
MGCGVVLLLVAAAVSALAVEVPTDVSMGLLAEPQVAMFCGKLNMHINVQTGKWESDPSGT
KSCIGTKEGILQYCQEVYPELQITNVVEANQPVSIQSWCKKGRKQCRGHMHIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDQCESHLHWHTVAKESCGDRTMTLHDYGMLLPCGIDRF
KGVEFVCCPTEVERNADSAERDADDSDVWWGGVETDYADNSRLMEPAPTEQQEEPKPSVA
EEDDDEEAPEEDDDEEEREVVDDGLDNDQDGDGEEDEEVVEEDDEDDQNDDFDALDDDDE
EAGEPTASVAMTTTTTTTTESVEEVVRDVCWADAETGPCRALLPRWFFDREEGRCVQFIY
GGCGGNRNNFESEEYCMSVCSSVLPTAKPSSSDAVDHYLETPADENEHAHFQKAKESLEA
KHRERMSQVMREWEEAEREAKNLPRADKKAVIQRFQETVEALEQEAASERQQLVETHMAR
VEALLNDRRRLALESYLTALQEDPPRPRHVFSLLKKYVRAEQKDRQHTLKHFEHVRMVDP
KKAAQIRPQMTFSADSDQNRIHLTGSDLKVSSHPPQVLTHLRVIEERMNQSLGLLYKVPG
VADDIQDQVEVLQREQAEMAQQLANLQTDVRVSYGNDALMPNQEAGDGQSDLLPQEDVGF
IHPESFNQPNTENQVELVDSRPSFDRGVPTRPVTGMKMDAVPELRMETDNRQSAEYAVHH
QKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLRKKQYTSIHHGVIEVDAAVTPE
ERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggggtgcggagtagttttactgctggtggcagcagcggtgtcagcgctggccgtggag
gtgccgactgacgtgtccatgggtctgctggctgagccccaggtggccatgttctgcggg
aagctcaacatgcacatcaacgtgcagacgggcaagtgggagtccgacccctccggcacg
aagagctgcatcggcaccaaggaggggatcctgcagtactgccaggaggtgtatccggag
ctccagatcaccaacgtggtggaggccaaccagccggttagcatccagagctggtgtaag
aagggacgcaagcagtgccgcggccacatgcacatcgtggttccctatcgctgcctggtg
ggagagttcgtgagcgacgctctgcttgttcctgacaagtgtaagttcctgcaccaggag
cgcatggaccagtgtgagagccacctgcactggcacactgttgccaaggagtcttgtgga
gatcggaccatgaccctccacgattatgggatgctgttgccgtgcggcatcgatcgcttc
aagggagtggagttcgtctgctgccccactgaggtggagcgcaacgccgacagcgccgag
cgggacgctgacgactccgacgtgtggtggggcggcgtggagacggactacgccgacaac
agtaggttaatggagccggcgccaacagagcagcaggaggagcccaaaccatctgtggca
gaggaggacgatgacgaagaggcgcccgaggaggatgacgacgaggaggagagggaggtg
gtggacgacggtctggacaatgaccaggatggggacggcgaggaggacgaagaggtggtg
gaggaggatgacgaggatgaccaaaacgacgatttcgacgcgctcgacgacgacgacgaa
gaggccggcgagcccaccgccagcgtcgccatgacaaccaccaccaccacaaccacagag
tccgtggaagaagtcgtccgggatgtgtgctgggccgacgcagagaccggcccgtgccgg
gccctgctgccccgctggttctttgatcgcgaggagggccgctgcgttcagtttatctac
ggcggctgcggaggcaacaggaataactttgagtcagaggagtactgcatgtctgtctgc
agcagcgtcctccccaccgccaagcccagctcctccgacgccgtggaccactacctggag
acgcccgccgacgagaacgagcacgcccacttccagaaagcgaaggagagcctggaggcg
aagcaccgcgagaggatgtcccaggtgatgagggaatgggaagaggcggagagggaagcc
aagaaccttcctcgtgccgacaagaaggccgtgattcagcgtttccaggagacggtggag
gccctggagcaggaggccgccagcgagcggcagcagctagtggagacgcacatggcgcgg
gtggaggcgctgctgaacgaccgccgtcgcctggcgctggagagctacctgactgcgctg
caggaggaccctcccaggcctcgacacgtcttcagcctgctgaagaagtacgtgcgcgcc
gagcagaaggaccggcagcacaccctcaaacacttcgagcacgtccgcatggtggacccc
aagaaggcagcgcagatccgacctcagatgaccttcagcgccgactctgatcagaaccga
atccacctgacaggaagtgatttgaaggtgtcgtcccaccccccgcaggtgctgacccat
ctgcgagtcatcgaggagcgcatgaaccagtctctgggcttgctctacaaagtgcccggc
gtggccgacgatatccaggaccaagtcgaagtcctccagagggagcaggcggagatggcc
cagcagctcgccaacctgcagaccgacgtgagggtcagctacggaaacgacgccctgatg
cccaaccaggaggcaggagacggccagagcgacctgctgccccaggaggacgtgggcttc
atccaccccgagagcttcaaccagcccaacacggagaaccaggtggaactcgttgattct
cgcccgagttttgacagaggcgttcctactcgaccagtaactgggatgaagatggacgca
gttcctgagctgcgcatggagacggacaaccgacagagcgccgaatacgcagttcaccat
cagaagctggtcttcttcgcagaagacgtgggctccaacaagggcgccatcattggcctg
atggtggggggcgtggtcatagccacggtgatcgttatcaccctggtgatgctgaggaag
aagcagtacacctccatccaccatggagtcatcgaggttgacgccgccgtcacccccgag
gaacgccacctgtccaagatgcagcagaacggttacgagaatccaacctacaagttcttt
gagcagatgcagaactga
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