Oryzias latipes (Japanese medaka): 101162193
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Entry
101162193 CDS
T02443
Symbol
colgalt1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00310
Lysine degradation
ola00514
Other types of O-glycan biosynthesis
ola01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
101162193 (colgalt1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
101162193 (colgalt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ola01003
]
101162193 (colgalt1)
Enzymes [BR:
ola01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
101162193 (colgalt1)
Glycosyltransferases [BR:
ola01003
]
O-Glycan biosynthesis
O-linked Gal type
101162193 (colgalt1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
MT-A70
Motif
Other DBs
NCBI-GeneID:
101162193
NCBI-ProteinID:
XP_023821587
UniProt:
H2MJC8
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All DBs
Position
1:complement(35897656..35923554)
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AA seq
609 aa
AA seq
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MLRVGPLLPALLFLLLPARSRGYFPEERWSPESPLLAPRVVVALICRNAEHCLPLVLGAI
ERLNYPKDRVALWVATDHNSDNTTAILRDWLIHVQKYYHYVEWRPQEEPSRFTDEVGPKH
WNNLRYEHVMKLRQAALNTAREIWADYILMTDCDNLLTNPDVLWKLMSENKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYMPIRRQERRGCFAVPMVHSTYLVDLRKEASRNLAFYP
PHEEYNWALDDVIVFAYSARMADVQMYVCNKETYGYLPVPMRAHASLQDEAESFLHTHLE
VMVKDPPLEPSSFLSVSPKQPNKMGFDEVFMINLVRRADRRERMLRSLYEQEISCKVVAA
VDGKALNISDMESLGIRMLPGYKDPYHGRPLTKGELGCFLSHYNIWKEIVERGLETSLVL
EDDLRFEVFFKRRLQALLQEVTTHRLDWDLIYIGRKRMQVDRPEKSVPNIHNLVEADYSY
WTLAYILSKRGAQKLLGAEPLSKMLPVDEFLPVMYNKHPVSEYMERFERRDLHAFSAEPL
LVYPTHYTGDPGYVSDTETSVVWDDETLKTDWDRAKSRKTHEQGELSFEAQNSDVLQSEL
ENWSARDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgctccgggtcggcccgctgctccccgccctgctgttccttctgcttccggcccggagc
cggggctatttcccggaggagcgctggagccccgagtcccctctgctcgctccgcgggtc
gtcgtggcgctcatatgccgcaacgcggagcactgtctgccgctggtgctgggagccatc
gagcgtctcaactacccgaaggaccgcgtggcgctgtgggtggcgacagatcacaactct
gacaacacaacagccattctaagagactggctcatccacgttcagaagtactaccactat
gtggaatggagaccccaggaggaacccagtcgctttacggatgaggtggggccaaagcac
tggaataatcttcgttatgaacatgtgatgaagctccgtcaggccgcactgaacaccgcc
cgtgaaatatgggcagactacatcctgatgaccgactgtgacaacctactcaccaatcct
gatgtgttatggaagctaatgagcgagaacaagaccatcgtggctcccatgctggagtcc
agagcggcatattccaacttctggtgtgggatgacttcacagggttactacaagcgtact
ccagcctacatgcccatccgcaggcaggagcgtagaggctgttttgccgtaccaatggtt
cactccacctacctggtagacctccgaaaagaagcctcccgtaatctagctttctacccg
ccacacgaggagtacaactgggccttggatgatgtcatcgtctttgcttactctgctcgc
atggccgatgtgcagatgtacgtatgcaacaaggaaacctatgggtatttgccggtacca
atgcgggcccacgccagcctgcaggatgaggcagagagctttttacatactcacctggaa
gtcatggtgaaagatccacctttagagccttccagcttcctgtccgtctccccgaagcag
cctaacaagatgggctttgatgaggttttcatgatcaatctggtgcggagggctgaccgt
cgggagcgaatgctccggagcctgtacgagcaggagatcagctgtaaggttgttgctgca
gtggacggcaaagctctgaacatctctgacatggagtcactgggaattagaatgctgcca
ggatacaaagacccgtatcatggccggccgctcaccaagggggaactgggttgtttcttg
tctcattacaacatttggaaggagatcgtagaacgcggtctggagacctccttggtgctg
gaggacgatctccgctttgaggtgtttttcaaacggcgtcttcaggctctgctgcaggaa
gtgacgacacaccgcttggactgggacctgatctacatcggtcggaagcggatgcaggtg
gaccgcccagagaagtccgttccaaacattcacaacctggtggaggcagattattcctac
tggactctggcctacattctgtccaaacgaggagcgcagaagctcctgggggcggagcct
ctgagcaagatgcttcccgttgacgagttccttcccgtgatgtacaacaagcatccggtc
tcggagtacatggagcgttttgagaggcgggacctgcacgccttttccgccgagccgctt
ctagtgtaccccacccattacaccggcgatcccggctacgtgagtgacacggaaacctcg
gtcgtctgggacgacgagacgctgaaaacagactgggaccgggccaagtcgaggaaaacg
cacgagcaaggggagctgagcttcgaggcacagaattccgatgtgctgcagtcggaactg
gagaactggagcgcacgggatgagctgtga
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