Oryzias latipes (Japanese medaka): 101162320
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Entry
101162320 CDS
T02443
Name
(RefSeq) rho GTPase-activating protein 21 isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101162320
Membrane trafficking [BR:
ola04131
]
Endosome - Golgi transport
Others
Others
101162320
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
101162320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PH_9
PDZ_6
PDZ
PDZ_2
PH_11
Adeno_L433K_22K
Motif
Other DBs
NCBI-GeneID:
101162320
NCBI-ProteinID:
XP_011485174
LinkDB
All DBs
Position
17:25202905..25234415
Genome browser
AA seq
1768 aa
AA seq
DB search
MMAFRWGPPCEDEEKRARFSFCESDYGAWRTLADPFATEEEPFAWQRPKTLLLRRTSQGF
GFTLRHFIVYPPESSMHGFPVEDQGRRGRQQNRLDAMDTIFVKQVKEGGPAHEAGLCTGD
RIVKVNGASIIGKAYGEVISLIQDSGDFLELCVMPKDEDILQLAYSQDAYIRGHSSYSGN
ASHIPDPPPVCYPRIDCKPTGMAQATDITGQAGRGLMATPDHGYRKEITVPPSPPRQPYP
KSQTAVRMHNNNVRTVVVPPNTAHLGRMGPAHRADFTGPAFFRGRPGSLAQYPYPQKADV
YPGGPGMILMGGQVPQYPGNHQNIDWRTYQTYREYIDNKGIHSHGSRTIQDRLDSLRTAS
QSSFPTSHHIPRGDWAPKDIRRRSTSHERSYQVPPLHFQIAPRSVSQDRMINADKISRAS
DWPPRSASQDGLVHKARVRTTDYCDPAELAWSNERKIGLGRADQGTRPTRQSMPRQAMLC
RPSIGYGGATRVPTNPSFYHKGPNFNQTRSSPILSDRTVYYGKSKSVEQSFSDQRVSVNL
GQTSQQGQSRMRAETMHPAETRRDEPLRGVRSASCSASKELPQRPAIPNVPQPNALSEIN
GQSQSEAGVVLRQKPPSGKNPSPLRHQSYILAVNDEGADVMACYLPNDARREMHMRRLEE
HHTSCSSNLDESLDSIPFIDEPVSPSVDQEATHIPPSAVISVAPSIATAPSSQGSPCLPI
RRQLSHDQESMRSALLDSDSASKTERSKSYDEGLDSYPEEGRGRSSSKQISGFRGLRKTL
DGTKPGDTGSRRESSSCIFPDSSKEGYLNFRQLCAEKNKRVSGGLKSWKQIYAVLQGQTL
TLYKDRKDAQSEEDPLRIGVKACLIDISYSDTRRKNVLRLTTTDCKYLFQADGKEEMLSW
IKVIQDNSNPDEENAAVTSQDLINKKIKEYNMSSSSSRSEPSPKTGRQSLSIRQTLLGGK
NDGRVLGPHSPKMGEERRTLKDEASPPRDRGAWKIGIPGIMRKPFEKKTPAGITFEIRLE
DCPPSKSNEFVPLIVELCCNIVEERGLEFTGIYRVPGKKAAISSMQEELNSKGMADIDIQ
EEKWQDLSVISSLLKLFFRKLPEPLFTNEKYDEFIEASKTEDPVERLKNLKRLVYELPKH
HFETLKFLCAHLKRVSDNCEKNKMEPRNLAIMFGPTLVRTSEDDMTNMVNHMPDQCKIVE
NLIQQYDWFFTEECEQDPITSADQEGTVQSQPVPNIDHLLPNITRSSTSPGEVSDSACSD
SSKLVFGSFFANRKRKKAKDRTVLNSSDDDLDAVFTKEEVQKEGQQQPLWSPDSQIEVDV
QTDENSDKERGRDSSKEELDKPTREEPYPPDYLSAEHISSTLQTASPYTFPFHSPNLGYS
VPKAQESSLSDAPTSYDDVVSDLGTMNSTSSQASVPRTRRGRAAALGMEACPSGPGAEVC
SITSDYSTTSSMTFLTGAEHSALSPEVQSVSESRGGDDADDERSELISEGRPVETDSESD
LSVFTVGRADHPEVQEVPRAFPTHRLIECDTLSRKKSSQQKTDSESSLDGARSEKDSSKL
SRGSGSVKGRSTGSLSASSRNELDKTEPAWKLKITDRLKVRLRTSADDMFGVGTQRSQSP
ETRSKKKKNIRRRHTMGGQRDFEELSVLGVWSQQVGGGSGSRSELSAVDRLKPKCSSQDF
SIGDWIARQRHRTSNPEVSFDLSEQQGGLCHSNFQNPGPSTSSEAPRHAAEPLSGDAPPS
KNLSLSATAHPHKLNSSQVVHSRFYQYL
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgttccgttggggtcctccctgtgaagatgaggagaaaagagcacggttttct
ttctgtgagagcgactatggagcgtggaggactttggcagatccttttgcaacagaagag
gaaccatttgcatggcagaggcctaaaactctgcttttacgacgcacatcccaaggattc
gggttcaccttgcgacatttcatcgtgtatcctccggaatcgagcatgcacggcttcccg
gtggaagatcaaggccgcagagggaggcagcagaataggctggacgccatggacactata
tttgtgaagcaagtcaaggaaggtggtcctgctcatgaagctgggctttgcacaggggat
cgaatagtgaaagtgaatggagctagtattattgggaaagcctatggagaggtgatatct
ttgattcaagacagtggagactttcttgaactgtgtgtgatgccaaaagatgaggatatt
ctacagctggcttattcccaggatgcctacatccgtggccacagcagctacagtggaaat
gccagccacatccctgatccaccaccagtatgttacccaagaatagactgtaagccaacg
ggcatggcccaggcaacagatataacggggcaggctggcagagggctaatggcaactcct
gaccacgggtatcgcaaggaaatcaccgtaccgccatctcctccccgtcagccataccct
aaaagtcaaactgcagtgcgcatgcacaacaacaatgttaggactgtggtggttcctcct
aatacagcccatttggggcgcatgggtccagcacacagggcggatttcacaggacctgcc
tttttcagggggagacctggatcattagcccagtatccttacccccaaaaggctgatgtc
taccctggtggtccaggtatgattctaatgggaggtcaggtacctcagtacccaggcaac
catcaaaacattgactggcgcacataccaaacttacagggagtatatcgacaacaaggga
attcattcccatggcagtcggactatccaagacaggctggacagtttacgaactgccagt
cagagttcttttcccacttcccatcacattccccgaggtgactgggcccctaaggatata
cgacgcaggagtacgtcccatgaacgatcataccaagtacccccacttcactttcagatt
gccccacgtagtgtttcacaagaccgcatgatcaatgctgacaagattagccgtgcctca
gactggccccctcgaagtgcatctcaagacggccttgtccacaaagctcgagtacgcact
acagactattgtgatccagcagaactagcttggtctaatgagaggaaaataggacttgga
agggcagaccaaggcacaaggccgaccagacagtcaatgcctagacaagcgatgctttgt
cggccctctattggatatgggggtgccacgagggtgccaacaaacccttccttctaccac
aaaggaccaaattttaaccaaacccgatcatcacccatcctctccgataggactgtatat
tatggaaagagcaaaagtgttgaacaatctttctccgaccaaagagtttcagtcaatcta
ggccaaactagccaacaaggccaaagcaggatgcgagcagaaaccatgcaccctgccgag
acacgaagagatgagccattgagaggagttcgatctgcatcatgctctgcttcaaaagag
ctcccccaaaggcctgctatcccgaatgtaccccaaccaaatgctctgagtgaaatcaat
gggcaaagtcagtcggaggctggggtggttctaaggcagaagcccccctctggaaagaac
ccaagtcccctgcggcaccaatcctacatcctggctgtgaacgatgaaggagcggacgtg
atggcatgctatcttccaaacgatgcacgtcgagagatgcatatgcgccgcctcgaggaa
catcacacctcctgctccagcaacctggatgagtctctggactccattccattcattgat
gagccggtcagccccagtgttgaccaggaggcgactcatattcctccctctgctgtgata
tctgttgcaccatccatagccacagcaccttccagtcaaggctcaccatgtcttcccatt
cgtcgtcagctatcacatgaccaagaatccatgcgaagtgctttgttggactcagactct
gccagtaaaaccgagcgctccaagtcttatgatgagggcttggacagctacccagaagag
ggcaggggaagatcttctagcaaacaaatatcaggtttcaggggactacggaagactctg
gatgggactaaacctggagatactggatcccgcagggagtcttcttcatgcatcttccct
gattcttccaaagaggggtatcttaacttccgacagctttgcgcagagaaaaacaagcgt
gtcagcggaggcttgaagtcatggaagcaaatatatgctgttttacaaggtcagactctg
accctttacaaagatcggaaagacgcacagtcggaagaagacccactgcggatcggcgtc
aaagcctgcctgattgacatctcctatagtgacacaagacggaagaatgtgctgcgatta
accaccacagactgcaagtatttgttccaggcagatggcaaggaggaaatgttatcatgg
atcaaagtcattcaggataacagtaacccagacgaagagaatgctgcggtaaccagccag
gacctgatcaataaaaagatcaaagaatacaacatgagctcgtccagcagcagatctgaa
ccctccccaaaaacaggcaggcagtcacttagcatcaggcaaactctgctgggggggaaa
aacgatggcagggttcttggtccccattcacctaaaatgggagaggagcggaggactctt
aaagacgaggcgagtcctccgcgggacaggggagcctggaaaatcggtattccaggaatc
atgaggaaaccctttgaaaaaaagactccggcgggcatcacgtttgaaatccggcttgaa
gactgtccaccttcaaaaagtaacgagtttgttccgctcatcgtggagctgtgctgtaac
attgtggaggagcgcgggctggagttcacggggatctacagggttcctgggaagaaagca
gccatctccagcatgcaggaggagctgaatagcaaaggcatggcggacatcgacatccag
gaagagaaatggcaggacttgagcgtcattagtagtttactaaaattgttttttcggaaa
ctcccagaacctctttttacaaacgagaagtatgatgaatttatcgaagccagcaaaaca
gaggacccagtggagagacttaagaacctcaagagactggtttatgaactaccgaagcat
cattttgaaactcttaaattcctttgtgctcacctcaagagggtttctgacaactgtgaa
aaaaataagatggagcctcgtaacctggcgatcatgtttggtcctactctggtccgaacc
tcagaagacgacatgaccaacatggtcaatcacatgccagatcagtgcaagatagtcgag
aacctcatccagcaatacgactggttcttcacagaagaatgcgaacaagaccctatcaca
tcagcagaccaggaaggcacagttcagtcccaacctgtgcccaacatcgaccacttgctc
ccaaacatcactcgcagctcaacctcaccgggggaagtctcagactcggcatgtagtgac
tcctccaaattagtgttcggctccttctttgctaaccgcaaacgcaagaaggccaaggac
agaactgtgctcaacagctcagatgacgacctggatgctgttttcactaaggaggaggtg
cagaaggagggccagcagcagcctctctggtcccccgacagccagattgaggtggatgtg
cagacggatgagaacagcgacaaagagaggggcagggacagctccaaggaagagctggac
aagcccacccgggaagagccttaccctcccgactacttgtctgccgagcacatttcctcc
acccttcaaaccgcttcaccctacacctttccattccattccccaaatctcggctactct
gtgcctaaggctcaagagtcgtccctgtcagacgcgcctaccagctatgacgacgtggtt
tctgacctcggtacgatgaacagcaccagctcccaggcgtctgtgcccagaaccaggcgg
gggagggcggcagctctgggaatggaggcttgcccgagcggtccaggagccgaggtttgc
tcgatcacctcggactactccaccacctcttccatgaccttcctgaccggagctgaacac
agcgcgctcagccccgaagtgcagtccgtgtccgagagccgaggcggagacgacgccgac
gatgagagaagcgagctcattagcgaggggcggccggtggagacagacagcgagagcgac
ctgtcagtgtttactgtcgggagggcggatcacccagaggtgcaggaagttcctcgggcc
ttccccactcataggctcatcgagtgcgatacgctgtcgagaaaaaagtcttcccaacag
aaaaccgacagcgagtcgtccctggatggagctcgcagtgagaaggactccagcaaactg
tcacgcggttccggttcagtgaagggccgctccaccggaagcctcagcgcctcgtcccgg
aatgagctggacaagacggagccagcgtggaaactgaagatcacagacaggttgaaggtc
cggctgcgaacgtcggctgatgacatgtttggcgtgggcactcagaggagtcagtccccg
gagacccgcagtaagaagaagaagaacatcaggcgcaggcacaccatgggcggacagcgg
gactttgaagagctgtccgttttgggggtgtggtctcagcaagtcggcggcggatcaggc
tcgcggtcggaactgtcggctgtggaccggctgaaacccaagtgtagctctcaggacttc
tccatcggagactggatagccagacagcgccaccgcaccagcaatcccgaggtcagcttt
gacctctctgaacagcagggggggctgtgtcacagcaactttcagaacccagggccctca
acctcttctgaagccccacggcatgcagccgaaccactaagcggagacgccccccccagt
aaaaacctgagcctgtccgccaccgcacaccctcataagctcaacagttcccaggtggtc
cattcccgtttttatcagtacctgtga
DBGET
integrated database retrieval system
