Oryzias latipes (Japanese medaka): 101162345
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Entry
101162345 CDS
T02443
Name
(RefSeq) ras-related protein Rab-40C
KO
K07928
Ras-related protein Rab-40
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101162345
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ola04031
]
101162345
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
101162345
GTP-binding proteins [BR:
ola04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
101162345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
bHLH_HIF1A
Motif
Other DBs
NCBI-GeneID:
101162345
NCBI-ProteinID:
XP_004066238
UniProt:
A0A3P9JUM6
H2MCQ7
LinkDB
All DBs
Position
1:29731957..29737208
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AA seq
290 aa
AA seq
DB search
MRGMMGAQSSPVKSYDYLLKFLLVGDSDVGKGEILDSVQDGSAESPYAYSSGIDYKTTTI
LLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNSWSFDGIDRWIREIDEHA
PGVPKILVGNRLHLAYKRQVPTEQARAYAEKNSMTFFEVSPLCNFNIVESFTELSRIVLM
RHGMEKFWRPNRVFSLQDLCCRSIVSCTPVHLIDKLPLPHTIKSHLKSFSMANGMNAVMM
HGRSYSVTNSATSGVNSAGSKANSLKRSKSFRPPQSPPKYSSSKGNCKIS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggaatgatgggagctcagagcagtcccgtgaagagctatgattacctcctgaag
ttccttcttgtgggagacagcgatgttggaaaaggggaaatcctggacagcgttcaggac
ggatccgctgagtctccatacgcctacagcagcgggattgattacaagaccacaacaatt
cttctagacggtagaagagtgaagctagagctgtgggacacatcggggcagggaagattt
tgcaccatcttcaggtcgtattcccgtggagcacagggcatcctgcttgtttatgacatc
accaacagctggtcgtttgatgggattgatcgttggatccgggaaatcgatgagcatgct
ccaggtgtgcccaagatccttgtggggaaccgcctccacctggcctacaagaggcaggtg
ccaacagagcaggctagagcctacgcagagaagaacagcatgacgttcttcgaggtcagt
cctctctgcaacttcaacatagtcgagtccttcaccgagctttcccgcattgtgctgatg
aggcacggcatggagaagttctggaggcccaacagagttttcagcctccaggatctgtgc
tgccgctccatcgtttcctgcacgccggttcacctgattgacaagctgccactaccccac
accatcaagtcccacctcaagtccttctccatggccaatggcatgaacgccgtcatgatg
cacggacgctcttactctgtgaccaacagcgccacctctggtgtgaacagcgctggaagc
aaagctaacagtctgaaacgctcaaagtcctttcggcccccccagagtcctcccaagtac
tcgtcctccaaggggaactgtaagatctcgtag
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