Oryzias latipes (Japanese medaka): 101162349
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Entry
101162349 CDS
T02443
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101162349
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
101162349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1_C
UBA_N4BP1
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
101162349
NCBI-ProteinID:
XP_023821726
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Position
2:complement(21946690..21965758)
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AA seq
910 aa
AA seq
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MGQKDYGEAGSGHILDLGLDLEYLHIAGAERQAGCALTPPSMKEQGESYGNNPPGSPPPA
GLPSEPCAATAAATDTDGGEGAPAYSKNTHQPLCRTPCVDLGPEGPPEPPEQQQESPVQS
VFEKPPVTPKKGPEAEGKEYQAKLEFALKLGYSEETVRLVLSKLGPDTLINDILGELVKL
GTKSNSEQSGVALTSTSSSSSSSSSCGCSDLTDGQRSDSPCLSDSVCDQDNLRPIVVDGS
NVAMSHGNKEVFSCQGIKLAVDWFLEHGHQNVTVFVPAWRKEQSRPDAPIKDQEILRRLE
KEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPEWKKFIDER
LLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVPEQKKQPCPYGKKCTYGHKCKYYHP
ERGAQPQRAVADELRASAKTCALPKNQGEAGLVKSHSVPAGSTETKKGAPKRQSDPSIRA
LSYSDAEEKLLAKSRAESQKSSVCGSGSSSNSSTSCGGGLSVSPAPPSSLILPQDQPRAA
PLLPAPSHDLYPHCESPDLSYCSVARAYSGLSLSSRRSPDCRYANDADLRLGSAGSECGS
ESSVSCGSSCDSYTERSCPACPPDAVLEEHFANPHSRIYPHHVTMSHEGCGLHPAEYLQH
SHAPGSGAHAYHMTAACMQSFSHDQPPPEAPPKRPLYPLPPHLQHQPLASRSSCPGDYHS
LHQPHPPGSPLGRCLAPRAESVSDSHLYEHLSAPPHRHRPKTLPSWDTYYRQPSLPPSRY
EPSTFQSLPDTRQSPWHTPPWSQDSYARHHSSHPALHPSPTRYLSHAPHPAHPPHPAYHR
SHLEVPSHTPQHPDSPARSRLTDVREKVYINLCNIFPSELVSRVMARSPHATDAQQLAAA
ILAEKSQTGY
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgggccagaaggactatggggaggcgggatcaggccacatcctcgacctgggactggat
ttggagtatctccacatagcgggggctgagcggcaggctggctgcgccctcacacccccc
tccatgaaggagcagggggagagctacggcaacaacccccctggcagccctcctccagca
ggccttccgtctgagccgtgcgccgcaaccgccgcagccaccgatacagatggaggggag
ggcgcaccagcttacagcaagaacacccaccagccactctgtcggaccccgtgtgtggac
ctgggccctgagggacctcccgaacccccagagcaacagcaggaatctccggtccagtct
gtgtttgagaaacctccagtcacacccaagaaagggccagaggcggaagggaaagagtac
caagccaagctggagtttgccttgaaactgggctactccgaggagacggtgcggctggtt
ctgtccaagctcggccccgacaccctcatcaatgacatactgggagaactggtcaagttg
ggcaccaaatccaactctgagcagtcgggtgtggcgctgacctcgacctcatcgtcctcg
tcctcctcgtccagttgcggctgctctgatttgacggacggccagcggtcggactcgccc
tgtctgtccgactccgtctgcgaccaggacaacctgcggccgattgtggtggacggcagt
aacgtggctatgagccatggcaacaaggaagtgttctcctgtcagggtatcaagctggct
gtggattggttcctggagcacggtcatcagaatgtcacagtcttcgttcctgcatggagg
aaggagcagtcccggcccgatgcccccatcaaagaccaagagatcttgaggcgcctcgag
aaggagaagatcttggttttcactccctcgcggcgcgtccaaggtcggcgcgtggtctgc
tatgacgaccgcttcatcgtcaagctggcgtacgagtcggacggcatcatcgtctccaat
gacaactatagagacttagccaatgagaaaccagagtggaagaaattcatagacgagcgg
ctgctcatgtactccttcgtcaatgataagttcatgcccccagatgaccctctgggacgt
cacggcccaagcttggaaaacttcctgaggaaacggcccgtcgtacccgagcagaagaag
cagccgtgtccgtacgggaagaagtgcacttacggccacaagtgtaaatactaccaccca
gagagaggcgcccagcctcagcgcgccgtggcggacgagctgcgcgccagtgccaagact
tgcgcgctccctaaaaaccagggggaggcggggctcgtgaagagccacagcgtgcccgcc
gggagcactgagacgaagaaaggcgccccgaagaggcagtcggacccgagcatccgagct
ctgtcctacagcgacgccgaggagaagctgctggccaaaagccgagcggagagccagaag
agcagcgtctgcgggagcggcagcagctccaacagcagcacgagctgcggcggggggtta
tcggtgtcgccggcgcccccatcttcactgatccttccgcaggaccagcccagagcggcg
ccgctgctcccagccccaagtcacgacctctaccctcactgcgagtctcctgacttgagc
tactgctcggtggcgcgagcttattcgggtctgagtctctcgtcccgccggagcccagac
tgccgctacgccaacgacgcagacctgcggctgggctcggcgggctccgaatgcggcagc
gagagcagcgtcagctgcggcagcagctgtgactcgtacacggagaggtcgtgccctgcg
tgtcccccggacgccgtacttgaggagcattttgccaacccccacagccggatttaccct
caccatgtgaccatgagccacgaaggctgcggccttcatcccgccgagtacctgcagcac
agccacgcgccgggttcaggggcgcacgcctaccacatgactgcggcgtgcatgcagagc
ttctcccacgatcagcccccgcctgaagctccccccaagcgccccctttaccccctgccc
cctcacctccaacaccagccgctggcgtcgcgctccagctgtccgggagactaccactcc
ctgcaccagccccacccccccggctcccctctcggccgctgcttggccccgcgagctgaa
agcgtgtccgactcgcatctctacgagcacctttctgcgccgccccatcgccatcgcccc
aaaaccctccccagctgggacacctactacaggcagccatcgctgccgccctccaggtac
gagccgtcgacctttcagagtctgccagacactcgccagtcgccctggcacacgcccccg
tggtcacaggacagctacgcgcggcatcactcctcccacccggccctgcacccatcgcca
actcgctatttaagccacgccccgcatcccgcacaccctcctcaccccgcctaccacaga
tctcacctcgaggtgccctcccacaccccacagcacccagactcccccgcgcggagccgc
ctcacggacgtacgagagaaggtgtacatcaacctctgcaacattttcccctccgaactg
gtgagccgagtgatggccagaagcccccacgccaccgacgcccagcagctggccgccgcc
atcctggcagagaaatcccaaacgggttactag
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