Oryzias latipes (Japanese medaka): 101162350 Help Entry 101162350         CDS       T02443                                  Symbol ddb1 Name (RefSeq) DNA damage-binding protein 1   KO K10610   DNA damage-binding protein 1 Organism ola  Oryzias latipes (Japanese medaka) Pathway ola03420   Nucleotide excision repair ola04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:ola00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     101162350 (ddb1)   09124 Replication and repair    03420 Nucleotide excision repair     101162350 (ddb1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:ola04121]     101162350 (ddb1)    03400 DNA repair and recombination proteins [BR:ola03400]     101162350 (ddb1) Ubiquitin system [BR:ola04121]  Ubiquitin ligases (E3)   Multi subunit type E3    Cul4 complex     Adoptor protein      101162350 (ddb1) DNA repair and recombination proteins [BR:ola03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      Cul4-DDB2 complex       101162350 (ddb1)     TCR (transcription coupled repair) factors      Cul4-CSA complex       101162350 (ddb1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CPSF_A Beta-prop_RSE1_1st Beta-prop_RSE1_2nd Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  101162350 NCBI-ProteinID:  XP_004066902 LinkDB All DBs Position 3:10101950..10153041 Genome browser AA seq 1140 aa AA seqDB search MSYNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGR ISVMELFRPKGESKDLLFILTSKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGI IGIVDPECRMIGLRLYDGLFKVIPLDRENRELKAFNIRLEELQVIDVHFLYGCQAPTVCF IYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGTVALKDL HVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVTVMETFTNLGPIL DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRE SDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVAHQQLIQITSGSVRLVL QDSKALVSEWKEPQGRNISVAACNHTQVVLAVGRALYYLQILAGELKQISTTEMEHEVAC LDITPLGESSSESPLCAVGLWTDISARMLKLPCFTPLHKEMLGGEIIPRSILMTTFEGSY YLLCALGDGALFYFGLDLQTGALSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIY SSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES PRRICYQEVSQCFGVLSSRVEIQDASGAISAVRPSASTQALSSSVSSSKLFPSSTSPHET SFGEEVEVHSLLVVDQHTFEVLHAHQFLPSEYGLSLVSCRLGKDPSVYFIVGTAMVYPEE PEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFCHGSLVLQNLGES STPTQGSVLFGTVNGMIGLVTSLSEGWHSLLLDLQNRLNKVIKSVGKIEHSFWRSFYTER KTEQATGFIDGDLIESFLDLGRAKMQEVVSTLQIDDGGGMKREATVDEVIKIVEELTRIH NT seq 3423 nt NT seq  +upstreamnt  +downstreamnt atgtcttacaactacgtggtaacagcgcagaagcctacagcagtcaacgcctgcataaca ggtcatttcacatctgcagaggatctcaatctgctcatagccaaaaacacacgtttggaa atctatgtggtcacagctgaaggactgcgaccagtcaaggaagttggcatgtatggcagg atttctgttatggagctcttccggccaaagggtgagagtaaggacctgctgttcattctc acatccaagtacaacgcttgcatccttgagtacaaacagaatggcgacagcattgacatc atcacccgcgctcatggaaatgtgcaggatcgcattggacggccatcagagacgggcatt atcggaattgtggatccggagtgtcgcatgattggtctgaggctgtacgacggtttgttc aaggtgatccccctggaccgcgagaaccgcgagcttaaagcctttaacatccgtctggag gagctgcaggtcatcgatgtccacttcctgtatggctgccaggctccaactgtctgtttc atctatcaggacccacaaggacgccacgtaaagacctacgaggtttctcttagagagaaa gagttcaacaaaggtccatggaaacaagagaacgtggaggcagaggcatccatggtcatt ccagtgcccgagccgtttggtggagctataatcataggacaggagtccatcacctaccac aacggagacaaatacctggcgattgcccctcctactatcaagcaaagcaccatcgtgtgc cacaaccgcgtggaccccaacggctcccgctacctgctgggtgacatggagggccgcctg ttcatgctgctgctggagaaggaggagctaatggacggcacagtggcgctcaaagacctg cacgtggagctactgggagagacatccattgctgagtgtttgacctacttggacaacggt gtggtgtttgtgggctccagacttggtgactcgcagcttgtgaagctcaacgttgacagc aatgaacagggctcctatgtgaccgtcatggagaccttcactaatctgggacctattctg gacatgtgcgtggtcgacctggagcggcaaggccagggacagctggtgacttgctcagga gcgttcaaagagggctctcttcggatcatccgcaacggcattgggattcatgagcatgcc agcatcgacctgccaggaatcaaaggtttgtggccgctgcgctcggaggcgggcagagag tccgacgatatgctggtgctgtcgttcgtgggtcaaactcgtgtattgatgctgagtgga gaggaggtggaggagacagaacttccaggctttgtggacaaccagcagacgttttactgt ggcaacgtggcgcaccaacagctcattcagatcacatcgggctctgtgcggctggtgctt caggacagtaaagccttagtgagtgaatggaaggagcctcagggccgcaacatcagcgtg gcggcatgcaatcacacgcaggtggtgctagctgtgggacgcgccctctactacctgcag atcctggcaggagagctcaaacagatcagtaccacggagatggagcacgaggtggcgtgt ctggacatcacgccgctgggggagagcagcagcgagtcgccgctctgtgccgtggggctg tggacagacatctcggctcggatgctcaaactcccctgcttcacaccgctccataaggag atgttgggtggagagatcatcccccgctcaatactaatgaccacatttgaaggcagctac tacctgctgtgtgccctcggagatggagcgctcttctacttcggtcttgacctgcagacg ggtgcactcagtgagcgcaagaaagtcacccttggcactcagccaaccgtactgaggacc tttagatccttgtccacctccaacgtctttgcctgctctgaccgacccacggtcatctac tcatccaatcacaaactggtgttttccaatgtcaacctcaaggaggtcaattacatgtgc ccactcaactctgaaggctatcctgacagtttggctttggccaacaacagcactctgacc attggcaccattgacgaaattcagaaacttcacattcgcacggttcccctctacgagtct cccaggcgcatctgttaccaggaggtttcccagtgctttggggttctgtccagcagggtg gagattcaggatgcaagcggcgccatatctgctgtaaggccaagtgcaagcactcaggca ctgtccagcagcgtgagctccagcaagctcttccccagcagtacgtctccacatgagacc tccttcggtgaggaagtggaggttcacagtctgctagtagtggatcaacacaccttcgaa gttctccacgcccatcagtttctccccagcgagtatggcctcagcttggtgtcatgccgt cttggaaaagacccgtctgtgtacttcatcgtgggaactgccatggtgtacccagaggag cctgaacctaagcaggggcgcatcattgtcttccattacactgacggtaagctgcaaacc gtggcagagaaggaggtgaaaggagccgtctattctatggtggagttcaacggcaagctg ctggccagcattaatagcacagtccgtctgtacgagtggacggctgagaaggagctgagg accgagtgcaaccattacaacaacatcatggctctttacctgaagactaaaggagacttc atcctggtgggagacctgatgaggtctgtgctgctgctggcctacaaacccatggaaggc aactttgaagagattgctcgggatttcaaccctaattggatgagcgccgtggaaattctg gatgacgataactttctgggagcagagaacgcattcaacctgtttgtctgccaaaaggac agcgcggccaccacagacgaggagaggcaacacctgcaggaggtgggggtttttcacctt ggcgagtttgttaatgtcttctgccacggctcgctggtactgcagaacctcggggagagc tccacccccacccaaggctccgtgctctttggcaccgtcaacggcatgatcggtctggtc acatccctgtctgagggctggcacagccttctcctggacctccagaaccgcctcaacaaa gtcatcaaaagtgtgggaaagatcgagcacagcttctggaggtccttctacacagagcgt aaaacggagcaggccacaggattcatagacggggacctgatcgaaagcttcctggatctc ggccgggcaaagatgcaggaggtcgtcagcactctccaaatcgatgatggtggcggcatg aagcgtgaggccacagtggacgaggtgatcaagatcgtggaggagctgacgaggatccac tag

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