Oryzias latipes (Japanese medaka): 101162413
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Entry
101162413 CDS
T02443
Symbol
esr1
Name
(RefSeq) estrogen receptor
KO
K08550
estrogen receptor alpha
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
101162413 (esr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101162413 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ola03310
]
101162413 (esr1)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
101162413 (esr1)
Nuclear receptors [BR:
ola03310
]
3. Estrogen like
3A. Estrogen receptor
101162413 (esr1)
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Gene cluster
GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
zf-C17orf113
Motif
Other DBs
NCBI-GeneID:
101162413
NCBI-ProteinID:
XP_020570152
UniProt:
P50241
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Position
24:8942456..8950887
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AA seq
620 aa
AA seq
DB search
MSKRQSSVQIRQLFGPALRSRISPASSELETLSPPRLSPRDPLGDMYPEESRGSGGVAAV
DFLEGTYDYAAPNPATTPLYSQSSTGYYSAPLETNGPPSEGSLQSLGSGPTSPLVFVPSS
PRLSPFMHPPSHHYLETTSTPVYRSSHQGASREDQCGSREDTCSLGELGAGAGAGGFEMA
KDTRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDRNRRKSCQA
CRLRKCYEVGMMKGGVRKDRIRILRRDKRRTGVGDGDKVVKGQEHKTVHYDGRKRSSTGG
GGGGGGGRLSVTSIPPEQVLLLLQGAEPPILCSRQKLSRPYTEVTMMTLLTSMADKELVH
MIAWAKKLPGFLQLSLHDQVLLLESSWLEVLMIGLIWRSIHCPGKLIFAQDLILDRNEGD
CVEGMTEIFDMLLATASRFRVLKLKPEEFVCLKAIILLNSGAFSFCTGTMEPLHNSAAVQ
SMLDTITDALIHYISQSGYLAQEQARRQAQLLLLLSHIRHMSNKGMEHLYSMKCKNKVPL
YDLLLEMLDAHRLHHPVRAPQSLSQVDRDPPSTSSGGGGIAPGSISASRGRIESPSRGPF
APSVLQYGGSRPDCTPALQD
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagagacagagctcggtgcagatcaggcagctgttcggaccagcactcagatcc
aggatcagcccagcctcctcagagctggagaccctctccccacctcgcctctcgccccgt
gaccccctcggtgacatgtaccctgaagagagccggggttctggaggggtggctgctgtg
gactttttggaagggacgtacgactatgccgcccccaaccctgccacgactcccctttac
agccagtccagcaccggctactactctgctcccctggaaacaaacggacccccctcagaa
ggcagtctgcagtccctgggcagtgggccgacgagccctctggtgtttgtgccctccagc
cccagactcagtccctttatgcatccacccagccaccactatctggaaaccacttccacg
cccgtttacagatccagccaccagggagcctccagggaggaccagtgcggctcccgggag
gacacgtgcagcctgggggagttaggcgccggagccggggctggggggtttgagatggcc
aaagacacgcgtttctgcgccgtgtgcagcgactacgcctctgggtaccactatggggtg
tggtcttgtgagggctgcaaggccttcttcaagaggagcatccagggtcacaatgactat
atgtgcccagcgaccaatcagtgcactattgacagaaatcggaggaagagctgccaggct
tgtcgtcttaggaagtgttacgaagtgggaatgatgaaaggcggtgtgcgcaaggaccgc
attcgcattttacggcgtgacaaacggcggacaggcgttggtgatggagacaaggttgta
aagggtcaggagcataaaacggtgcattatgatggaaggaaacgcagcagcacaggagga
ggaggaggaggaggaggaggaagactgtctgtgaccagcatacctcctgagcaggtgctg
ctcctccttcagggcgccgagcccccgatactctgctcgcgtcagaagttgagccgaccg
tacaccgaggtcaccatgatgaccctgctcaccagcatggcagacaaggagctggtccac
atgatcgcctgggccaagaagctcccaggttttctgcagctgtccctgcacgatcaggtg
ctgctgctggagagctcgtggctggaggtgctcatgatcggcctcatttggaggtccatc
cactgtcccgggaagctcatctttgcacaagacctcatcctggacaggaatgagggagac
tgcgtggaaggcatgacggagatcttcgacatgctgctggccactgcttcccgcttccgt
gtgctcaaactcaaacctgaggaattcgtctgcctcaaagctattattttactcaactcc
ggtgctttttctttctgcaccggcaccatggagccacttcacaacagcgcggcggttcag
agcatgctggacaccatcacagacgcactcattcattacatcagtcagtcgggttacttg
gcccaggagcaggcgagacggcaggcccagctgctcctgctgctctcccacatcaggcac
atgagcaacaaaggcatggagcacctctacagcatgaagtgcaagaacaaagtccctctt
tatgacctcctactggagatgctcgatgcccaccgcctgcaccaccccgtcagagcaccc
cagtccttgtcccaagtcgacagagaccctccctccaccagcagcggcgggggtggaatc
gctcccggttctatatcagcatctcgaggcagaatcgagagtccgagcagaggccccttt
gctcccagtgtccttcagtatggagggtcgcgtcctgactgcaccccggcccttcaagac
tga
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