Oryzias latipes (Japanese medaka): 101162496
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Entry
101162496 CDS
T02443
Symbol
lrsam1
Name
(RefSeq) E3 ubiquitin-protein ligase LRSAM1 isoform X1
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101162496 (lrsam1)
04121 Ubiquitin system [BR:
ola04121
]
101162496 (lrsam1)
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101162496 (lrsam1)
Membrane trafficking [BR:
ola04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
101162496 (lrsam1)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101162496 (lrsam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
LRR_8
Prok-RING_4
LRR_4
SAM_1
SAM_2
zf-RING_2
LRR_6
Motif
Other DBs
NCBI-GeneID:
101162496
NCBI-ProteinID:
XP_023816444
LinkDB
All DBs
Position
12:complement(30181465..30213697)
Genome browser
AA seq
734 aa
AA seq
DB search
MPLFFRKRKPSEDSQKRLEYQLCRSKEPGADDILDISCCELSEVPSSAFSICKLFQKKVL
ILHSNDLKYLLPKGCDISTLSTLKVLDLHENKLATLPEDIGKLVSLQILNVEKNRLKVLP
ESIGDLHLLQTLNLKGNCLCELPSSMGSLRSLRTLDVSDNCITELPRALAYIRTLEIFSL
DAAAMSYPPACVCTEGTTSIQSFLCAELGEEYCPPSQYLLPVLETDCSTQNSDCVDDGDE
AWKNKFSEYEKRKEKKQQEKLAFERHLQQKQQEHTQLLLMNDSHRKNILNSVRKQQEREE
LGFNEQQRAQEAERLVLLEKVRQAEDTISGRIGTLLMDNSRQETNAKFLQDMEEERIYME
QLTAITQQEASSLREREVAAAMQKMLSDSCAMSVLQEASDHRRQSLVSEACRSLETLDKK
FDKMLSLQVLDKSKAIAEILQEEEMQKAAFQALQLQRDAVHSYIRSQIKLIEGELMQLTK
LEIKRRTLDSENLEEVLVEERAALSDLLQQLMKQRSQREQELQQVLVEMELKSESNQQNY
WMIQYQRLLDAKPLSLRMQEAGVERELVHLLCRLSAQHYLPIVAHHRLTAEALRNMKASD
LKKLGINETGIQKALLTWALGHQPTGAGKPARKDDSNEAGPSAPPPPSPPVPQSSSAMQT
PSPPCSPGTPVTPSGPPLLEGPGSSECVVCMETGSKVIFLPCGHVCCCQVCSDAVQNCPL
CRSNISQRIRLYHT
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgttcttcaggaagaggaagcccagcgaggactctcagaagaggctggagtat
cagctgtgccggtctaaagaaccgggagctgatgacatcctggacatttcctgttgtgaa
ctttcagaggtcccatccagtgccttctctatatgcaagcttttccagaaaaaggttcta
atccttcacagcaatgacctgaaatacctgctgcccaaaggatgtgacatcagcactctg
agcactttgaaggtgttggatcttcatgaaaacaagctagcgactcttcctgaggacatc
gggaaattggtctccctgcagattctaaacgttgagaagaaccggctgaaggttctgcca
gagtccatcggagatctgcacctactgcaaacgctgaacctgaaggggaactgcctctgc
gagctgccgtcctccatgggctcgctgagaagcctgcggaccctggatgtgagcgacaac
tgcatcacggagctgcccagagcgctagcatacatccgcactctggagatcttctctctg
gatgctgccgccatgtcctacccgccagcatgcgtgtgcacagagggaaccacgagcatt
cagagctttctgtgcgccgaactgggagaggagtactgcccgccatcccagtatctccta
ccggtgctggagaccgactgcagtacacagaactctgactgtgtggatgacggggacgaa
gcttggaagaacaagttcagtgaatatgagaagagaaaggagaagaagcagcaggaaaaa
ctggcgtttgagcgccacctgcagcagaagcaacaggagcacactcagctgctcctcatg
aacgactctcacaggaaaaacatcctgaactccgtccggaagcaacaggagcgggaggaa
ctgggcttcaacgagcagcagagggctcaggaggcggagaggctggtgctgctggagaag
gtccggcaggcggaagacaccatcagcggtcgcatcggcaccctgctgatggacaacagc
aggcaggagactaacgcaaagtttctccaagacatggaggaagagcggatttacatggag
cagctgacggccatcacacagcaggaggccagttcactgcgggagagggaggttgcagct
gcgatgcagaagatgctgtcggacagctgtgccatgagcgtcctgcaggaggcaagtgac
catcgcagacagagcctggtgtctgaagcctgcagaagtttggagactttggacaagaag
tttgacaagatgctctctctccaagttttggacaaatctaaagccattgctgagatctta
caggaggaggagatgcagaaggcggctttccaggccctgcagctgcagagggacgccgtc
cactcatacatccgcagtcagatcaagcttatagaaggggaattaatgcagctgactaaa
ctggagattaaaagacgcactctggactctgagaacttggaggaggtcctggtggaggag
cgggccgccctcagcgacctgctgcagcagctgatgaagcagaggagccagagagagcag
gagctgcagcaggtgttggtggagatggagctgaagtccgagtccaaccagcagaactat
tggatgatccagtaccagaggctgctggatgccaagccgctgtcccttcgcatgcaggaa
gcaggggtggagagagagttggtccacttgctgtgcagactgtcggctcagcactatcta
cctattgtggcccatcaccggctgaccgctgaggcgctgaggaacatgaaggcctctgac
ctgaagaagttggggatcaatgaaacaggaattcaaaaagctcttctgacctgggctctg
ggtcaccagcctacaggagctggtaagcctgcccgaaaggacgacagcaacgaggcgggg
ccctcagctccgcccccaccatccccacctgtcccacaaagcagctcagccatgcagacc
ccaagcccaccgtgcagcccagggacccccgtcaccccctctggcccacctctgttggag
ggcccagggagttcggagtgcgtggtctgcatggagaccgggtctaaggtcatcttcctg
ccgtgcggtcacgtgtgctgctgtcaggtctgcagcgatgctgtgcagaactgtcctctg
tgccgcagcaacatatcccagcggattcgcctctaccacacctaa
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