Oryzias latipes (Japanese medaka): 101162512
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Entry
101162512 CDS
T02443
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101162512
Ion channels [BR:
ola04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
101162512
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
101162512
NCBI-ProteinID:
XP_004067872
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All DBs
Position
4:7128361..7151054
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AA seq
1028 aa
AA seq
DB search
MDNSEDEFHQPCSPERAARERSSETRMKHFHLGGGAASKNSSNNGLRLCSGGQSESPGAS
SSSVRASLRPRGQARGSHALQSTESEAAGTGPGAVGMLCNKNGDCRRDPANSGSLSSLIS
RQERQADGAVTSEDSGSPAAGMDGSVTSAGPPTRGPVAEVKGAAATGKRESRVSFSNAPT
GKGQPPEQQTRHSVTFIKAEDGSQIVPEDGDSRGTQTYMQRQFSSLLQPGVNKFSLRMFG
SQKAVEKEQERVKSAGNWIIHPYSDFRFYWDFTMLMFMVGNLIIIPVGITFFKDETTTPW
IIFNVISDTFFLMDLVLNFRTGIVFEDNTEIILDPKKIKMKYLKSWFVVDFVSSIPVDYI
FLIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAV
VRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVSLNNMVNDTWSELYSFALFKAMSH
MLCIGYGRQAPESMSDIWLTMLSMIIGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVE
QYMSFHKLPADFRQKIHDYYEHRYQGKMFDEESILEELNEPLREEIINFNCRKLVASMPL
FANADPNFVTAMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSILTKGNISMKLMDG
SYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIG
KKNSILMHKVQHDLNSGVFNNHENEMIQEIVKYDREMVQQVDLSRPRAGTPPPPAGVFTP
PFAQHRDSAVATLQQSVAMNFCPPMQGNPVGNLQSPRRVRRFQVVQSVSSPVSASPLQSQ
ILASGAFAPVLASPPVQSPLAAGGWLFQYGSSSLGCHISGSQLSLGQQHFSSPAHRPGTH
KSAHCLQTGHLNQDGRALSASQPSLPHVGPQPGAPSPPQSTYVSSTSIGPPQNSVPQSSV
QSTLPHRAVPHQTSVGAFPRVSLPGSFHGFTAVGGTDTGQGGAGLPRKDSEPPEKDHVKV
RTRLSSNL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggataattccgaggatgaattccatcagccgtgctctccagaacgcgcggcgcgcgag
cgcagcagcgaaaccagaatgaagcactttcatcttggaggcggggccgcgtccaaaaac
tcctccaacaatgggctacggctctgtagtggggggcagtctgagagtccaggtgccagc
agcagctctgtccgcgcgtccctgcgcccacgcggccaagcacgcggctcccacgccctc
cagagcacagagtcagaggcagccgggacggggccgggggcagtcggtatgctatgcaac
aagaacggagactgtcgaagggatccggccaattccgggagcctgtcgtccctcatctcc
cgacaggagaggcaggcagatggggccgtaacaagtgaggacagcgggagcccggccgcg
ggcatggatggctccgtcacttcagcggggcccccaacacggggccccgtagctgaggtc
aagggcgcagcggcaacagggaaaagggagtccagagtttccttctccaacgccccaacc
ggtaaaggacagcccccggagcagcagacgaggcattcggtgactttcatcaaggcggag
gacggctctcagatcgtcccggaggatggggactctagagggacccagacttacatgcag
cggcagttcagctccttgctgcagcccggagtcaacaaattctccctgcgcatgtttggc
agccagaaggcggtggagaaggaacaggagcgcgtaaagtccgcgggtaactggatcatt
catccatacagcgacttcaggttttattgggactttaccatgctaatgttcatggtgggg
aatctgatcatcattcctgtgggcatcaccttcttcaaggatgagaccaccacgccctgg
attatcttcaatgtcatctctgacaccttcttcctaatggatctggtgctcaacttcagg
acagggatcgtgtttgaagacaacacagagatcatcctcgaccccaagaagatcaagatg
aagtacctgaagagctggtttgtggtggactttgtgtcctcaatccctgtggattatatc
ttcctcatcgtggagaaggggatcgactcggaagtgtacaagacggctcgggcgctccgg
atcgtccgcttcactaaaatcctcagcctgctgcgtctgctcaggctgtcaagactcatc
cgatacatccaccagtgggaggagatcttccacatgacctatgacctggccagtgctgtg
gtgcgaatcttcaaccttattgggatgatgctgctcttgtgccactgggatggctgcctc
cagttcctggttcccatgctgcaggactttccacctgactgctgggtttccctcaacaac
atggtgaacgacacgtggagcgagctctactccttcgccctctttaaagccatgagtcac
atgctgtgcatcggctacggcaggcaggctccagagagcatgtccgacatctggctgacc
atgctgagtatgatcatcggagccacctgctacgccatgttcatcggccacgccacggcg
ctcatccagtcgctggactcctccagacgtcaataccaagaaaagtataagcaggtggag
cagtacatgtccttccacaaactacctgctgacttcaggcagaaaatccatgactactac
gaacaccggtaccagggcaagatgtttgatgaggagagcatcctggaggagctaaatgag
cctctgcgcgaggaaatcatcaactttaactgccgtaagttggtcgcctccatgccgctg
ttcgccaatgccgatcccaactttgtgacggccatgctgaccaaactgaggtttgaggta
ttccaacccggagattacatcatcagggaggggacgatcggcaaaaagatgtacttcatc
cagcacggggtggtgagcatcctgaccaaagggaatatcagcatgaagctgatggatgga
tcctactttggagagatctgcctgctgacccggggaagacggaccgccagtgtgcgagcg
gacacctactgccgcctctactctctgtctgtggacaacttcaacgaagtgctggaggag
taccccatgatgaggagggcctttgagacggtggccatcgacagactggaccggatcggt
aaaaagaattccattctgatgcacaaagttcaacacgatctcaactcaggagttttcaac
aaccatgaaaacgagatgatccaggaaattgtcaagtatgaccgagagatggttcagcag
gtggacctgtcccgtccgcgggccgggacgccgcctccgcccgctggagtctttactcct
ccctttgctcagcacagagattcagccgtcgccacgctgcagcagtccgtcgccatgaac
ttctgcccccccatgcaggggaaccctgtggggaacctgcagtctcccaggagggtgaga
agatttcaggtagtgcagagcgtgtccagccccgtctcagcttcccccctgcagtcccaa
atcctggcttccggtgcctttgcccctgtgttggccagtccccctgtccaaagcccgctg
gcagctggggggtggttgttccagtacggatccagcagccttggttgtcacatttcgggc
tcccagctgtccctgggccagcagcacttttccagcccggcccaccggcccggcacccac
aagagcgcccactgtttgcaaacgggtcacctgaaccaggatgggagggccctctccgcc
tcccagccctccctgccccatgtggggccacagccaggggcccccagcccccctcagtct
acatatgtgtcatccacctctatcggacccccccagaattcagttcctcagtcaagtgtt
cagagcacattaccacacagagcggtcccccaccaaacgtccgtgggggcttttcctaga
gtgtctttgcctggttctttccatggcttcacagcagtggggggcactgacacaggtcag
gggggggcaggactccccaggaaagactctgagcctccagagaaggaccacgtcaaagtg
agaaccagactctcctcaaacttgtga
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