Oryzias latipes (Japanese medaka): 101162617
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Entry
101162617 CDS
T02443
Symbol
csgalnact1
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ola01100
Metabolic pathways
Module
ola_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
101162617 (csgalnact1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ola01003
]
101162617 (csgalnact1)
Enzymes [BR:
ola01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
101162617 (csgalnact1)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
101162617 (csgalnact1)
Glycosyltransferases [BR:
ola01003
]
Glycan extension
O-Glycan
101162617 (csgalnact1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
ATG14
Motif
Other DBs
NCBI-GeneID:
101162617
NCBI-ProteinID:
XP_011479889
UniProt:
A0A3B3IBN5
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All DBs
Position
12:complement(9002250..9034123)
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AA seq
587 aa
AA seq
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MLHVEMLRRGLLTWVSRVGGLLVLLCCSLSLLYVMTCSPPHSDNPPLTHVLPHAGSNHAK
LGLIIGGGTGEIGGARAPAQSPPGAHSYQVLLQEREEQHRLYISSLKKQIAQLKEDLQER
SEQLKKVQDSLKRDTGGPAARKESGTESQGGGHGDVQGVKSHQSDLQEFLRSQLAKAEVL
SGTRFPSEYAVVPFESFTLQKMYQLEMGLTRHPEEKPVRKDKRDDLGEVMEVALRSLNTP
PSPQDSRDAAGKRETSKVYTPSDFIEGITRTEKDKGSLYELTFRGESTSEFKRLTLFRPF
GPLIKVKNERVDTANVLINIIVPLSRRTDKFKQFMHNFREVCVRQDGRVHLTVVYFGKEQ
MSEVRSTLENTSREVNFKNYTLLQLDEEFSRGRGLDVGARAWKAGNVLLFFCDVDIYFNA
DFLNTCRINTQPGKKVFYPVLFSQYNPSLIYGGPDHIPPVEQQLVIKKDTGFWRDFGFGM
TCQYRSDFINIGGFDIDIKGWGGEDVHLYRKYLHSNLLVVRAPSRGLFHLWHEKHCVDEL
PPDQYRMCMQSKAMNEASHGQLGMLFFRQEIEAHLRKQKQQPNAQKI
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatgtggaaatgttaaggcgaggactgctaacctgggtgtcccgtgtcgggggt
ttgctggtgcttctctgctgctccctgtcccttctttatgtcatgacatgtagccctcca
cattccgacaaccccccgctgactcatgtgttaccccacgccggatcaaaccacgccaag
ttagggttaatcatcggaggggggactggggagatagggggagctcgggcgcctgcccaa
agcccaccgggagcccactcttaccaggtgctcctgcaagagcgagaggagcagcaccgc
ctctacatctcctccttaaagaagcagatagctcagctgaaagaagatttgcaagaacgc
agcgagcagctgaaaaaggtgcaggacagcctcaaaagagacactgggggtccagcagcg
aggaaggagtcaggtactgaatcacagggagggggccatggagacgttcagggggttaaa
agccatcagtctgacctccaggagtttttgaggagccaactggcaaaggctgaagtcctg
tcaggcaccagattccccagcgaatatgcagtggtgccttttgagagcttcaccttgcaa
aagatgtaccaactggagatggggctcacccgtcaccccgaggagaagcctgtgcggaag
gacaaaagggatgacctgggggaggtgatggaggtggctctgcgcagtctcaacaccccc
ccatcgccacaggacagcagggatgcagcaggaaaacgtgaaactagcaaagtctacacg
ccgtccgacttcatagaaggtatcactcgcacagagaaggacaaagggtcgttgtatgag
ctgaccttcagaggcgagtcgaccagtgaattcaagcgtctgacgctcttccggcctttt
ggacccctgataaaggtcaaaaacgagagggtggacacggccaacgtcctcatcaacatc
attgtcccgctgtccagacgcaccgacaagttcaagcagttcatgcacaacttcagggaa
gtctgtgtgcgtcaggatggccgggtccatttgactgtggtgtattttgggaaggagcag
atgagtgaagtccgtagcactttggagaacacgtccagggaggtcaattttaaaaactac
acactgctgcagctggatgaagagttttccaggggccgtggtttggacgtcggcgcccga
gcttggaaggcgggcaacgtgctgctcttcttctgcgatgtagacatctacttcaacgct
gatttcctcaacacttgcagaatcaacacacagccaggtaaaaaggtgttctacccagtc
ttgttcagccagtacaacccgtctctgatctacggaggtccagatcacatcccgcctgtg
gagcaacagctggtgatcaagaaagacaccgggttctggagagactttggattcggcatg
acttgccagtatcgatccgacttcatcaacataggaggtttcgacatcgacatcaaaggc
tggggtggcgaagacgtccacctgtacaggaagtacctgcacagcaaccttctggtggtt
cgagccccatcgcggggcttgttccacctgtggcacgagaagcactgtgttgatgagctc
ccgccggaccagtaccgcatgtgcatgcagtccaaagccatgaacgaggcctcccacggc
cagctagggatgctcttctttaggcaagagatcgaagctcatctccgcaagcagaagcag
cagccaaacgcccaaaaaatctaa
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