Oryzias latipes (Japanese medaka): 101162638
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Entry
101162638 CDS
T02443
Symbol
abcd3
Name
(RefSeq) ATP-binding cassette sub-family D member 3
KO
K05677
ATP-binding cassette, subfamily D (ALD), member 3 [EC:
7.6.2.4
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola02010
ABC transporters
ola04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101162638 (abcd3)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101162638 (abcd3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ola02000
]
101162638 (abcd3)
Enzymes [BR:
ola01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
101162638 (abcd3)
Transporters [BR:
ola02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD3 subgroup
101162638 (abcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_23
SMC_N
BrxL_ATPase
AAA_21
AAA_27
Rad17
AAA_29
DUF815
AAA_16
nSTAND1
Motif
Other DBs
NCBI-GeneID:
101162638
NCBI-ProteinID:
XP_004080884
UniProt:
H2LGA2
LinkDB
All DBs
Position
20:5054014..5070660
Genome browser
AA seq
657 aa
AA seq
DB search
MAAFSKFVTARNSSAVGGLLLLIYLLRKRRRTPKGHSSKGEPTLLLNTEKDGKRDKAAVD
KTFFLRVLKILRIMVPGVFCMETTYLILIASMLVTRTYCDVWMIQNGTMIESAIIGRSTK
DFKNCLFSFIKFMPAIALVNNLLKLGLNELKLKFRERLTKKLYDQYLQGFTYYKMGNLDN
RIANADQLLTQDVEKFCNSVVDLYSNLSKPLLDIGLYIFKLTSAIGAQGPTIMMSYLLIS
GLFLTRLRRPIGKMTVTEQRYEGEYRYVNSRLITNSEEIAFYNGNTREKQTIYSTFKKLV
DHLHSFIFFRFSMGFVDSIIAKYIATVVGYLVVSRPFLNLSHPRHLQSSHSDLLEDYYQS
GRMLLRMSQALGRIVLAGREMTRLSGFTARITELMMVLKELNAGKYERTMVSQQETDTTE
NRPLVPGRGQIIHRDHIIQFEHTPLMTPNGDMLIKDLNFKVTSGNNVLVCGPNGCGKSSL
FRVLGELWPLFGGELTKPERGKLFYVPQRPYMTLGTLRDQVIYPDTCEEQRRKGISDQVL
KQYLDNVQLGHILDREGSWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVS
VDVEDFIYSHCKTVGITLFTVSHRKSLWKHHKFYLHMDGRGNYEFKPITDETVEFGS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttcagcaagtttgtgacagccaggaattcgtccgcggttggcggccttctg
ctgctcatctacctgctccgtaaacggcgcagaacgccgaaaggtcacagttctaaagga
gagccgaccttgcttctcaacacagagaaagatggcaaaagagacaaggcggccgtggat
aaaaccttcttcctccgagtccttaagattttgcgaatcatggtgccgggagtattctgc
atggagacaacctacctgatcctcattgccagcatgctggtgaccagaacctactgtgac
gtgtggatgatccagaacggaaccatgattgaaagtgccatcattggtcgctcaaccaag
gatttcaagaactgcctgttcagcttcatcaagttcatgccagctatcgctctggtgaac
aatctgctgaagttgggcctgaacgagctgaagctgaagttcagagagaggctcaccaag
aagctctatgaccagtacctgcaaggtttcacttactacaaaatgggaaacttggacaat
cggattgccaatgcagaccagctgctgacccaagacgtggagaagttctgcaacagtgtg
gtggatctgtactccaacctcagcaagcctttgctggacatcggtttgtacatcttcaag
ctgacgagcgccatcggagctcagggcccgaccatcatgatgtcctacctgctgatctca
ggcctgttcttgaccagactgaggagacccatcggcaagatgacggtcacagagcagcgc
tatgaaggagagtaccgctacgtgaactcccgcctcataaccaacagtgaggagatcgcc
ttctacaacgggaacacgcgcgaaaaacagaccatttactccaccttcaagaaactggtg
gaccacttgcacagtttcatcttcttccgcttctccatgggtttcgtggacagcatcatt
gcaaaatacatagccaccgtggtgggctacctggtggtcagccggccatttctgaacctg
tcccacccccgacacctgcagagctcacactctgatcttttagaggactattaccagagt
ggccggatgctcctcaggatgtcccaggcactgggcagaattgttttggctggcagagag
atgacccgcctctctggattcactgctcggatcactgaactgatgatggttctgaaggag
ctgaatgctggcaaatatgagcgcaccatggtttcccagcaggagacggacactacagag
aataggcctctggttcctggacgagggcaaatcatccacagagaccacatcattcaattt
gagcacacgcccctcatgacccccaacggggacatgctcatcaaagacctaaactttaag
gtgacgtcgggcaacaacgttctggtgtgtggacctaacggatgtgggaaaagttctctg
tttcgagtccttggagagttgtggcctctctttggcggagagctcaccaaaccagagcga
gggaagctcttctacgttcctcagagaccctacatgactctgggcactctgagggatcag
gtgatttaccccgacacctgtgaggaacagaggaggaagggcatctctgatcaggttttg
aagcagtatctggacaacgttcagctgggtcacatcctggacagagagggtagctgggat
tcggtccaggactggatggatgttctcagtggaggagagaagcagaggatggctatggcc
agattgttctaccacaaaccccagttcgccatcttggacgagtgcacaagtgcagttagc
gtggacgtggaggacttcatctacagtcactgcaaaacggtgggcatcactttattcacg
gtgtctcatagaaagtctctgtggaagcatcataaattttaccttcacatggacggcaga
ggcaactacgagttcaagcccatcacagatgaaaccgtcgagtttggctcctaa
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