Oryzias latipes (Japanese medaka): 101162639
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Entry
101162639 CDS
T02443
Symbol
trappc10
Name
(RefSeq) trafficking protein particle complex subunit 10
KO
K20307
trafficking protein particle complex subunit 10
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101162639 (trappc10)
Membrane trafficking [BR:
ola04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
101162639 (trappc10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
TPR_2
TPR_14
TPR_12
SNAP
Motif
Other DBs
NCBI-GeneID:
101162639
NCBI-ProteinID:
XP_004081591
UniProt:
A0A3B3HKD6
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Position
21:5325683..5352919
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AA seq
1264 aa
AA seq
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MECQEERPIIYTMENKPIVTCAGDHNLFTSLYTSLAQQLPREPMEWRRTYGRAPKMIHLE
ANFVQFKEELLPKDGNKALLTFPFLHIYWTDCCDTEAYKSSVKEDMLRWHNSLRTHGSAD
WVIIVVESNDTKKKNKTNILPRSSIVDKIRSDFCNKQNDRCVVLSDPLKDSSRSQESWNS
LLLKLRTLLLMSFTKNLGRFEDDMRTLREKRTQPGWSFCEYFMVQEELAFVFEMLQQFED
ALVQYDELDALFTQYVLNFGAGDTANWLGSFCAPVRNWSGLLLRRPIDMEKRDSIQHEEA
SLLDLRSYLFSRQCTLLIFLQRPWEVTQRALELLHNCVQELRLLEVSVVDGALDCWVFLS
CLEVLHRIEGCCDQAQLAANSSHTVGLWAYATDKLKSLGELCGLVSEKGPTSEDLNKTVD
LLAGLGDERPETVNSLQSPYKKLKEALSSVEAFERHYLELSHAAMEMYRAIGRVRSARLV
GKSLAEFHMRKGDPKKAETFLQEALKSYLSEGWSLPVTHTRRQIAECQKLLDRKEDYLQT
SALLAGDSNLSTEERTHFCQEILNFAGKPGNPSHKATLSMSVFAQLTQLQFHPACASVHS
GAALKVELTLRCMMPISVHIQQLAASIHFDVDHGGTHGRTKRAQRRTNLGVIEFKMGDSL
AGLPCSAAPGPSLELDEVQDRSPSDNSLNSTGVVCKNTHLLLHHHEGTSLPDTLNCVSPP
TVTMKEGAQMLKVQDVTLAPGNNSIVFTAPSGQAGTYTLRQLCATVGEVQFVLSHIYPSV
RYEVYSQEPQLTVEPLSEPLLAGLPQMVKFTLLTGHYTVKKGDALQLSNAETLPILPSTS
CTARISSPTAELVSESTLSIQSSEKVTSISLPPTPPYHVLEFQLEVVCVIPSGSERPANE
RLTNGEVRHRPRSYSHPDTPMTAIDQRMSIDCPWSIYSTLLALTFYIPFKTKHSLLSAGN
RKYIQVCVQNVSDVNFTLAEVKLTEKQHASLELQSLNTKTHQLLCSKHSLFCLWEVRWKD
ELPSCMKCVFSASFSPLSQDTSAFKPFHYQFQLERVTTLYSVKAEISPPAGEQHCRSGLL
CGLEVCITRLTEPAEGEIAEESKTDPDGLKVTKLMYEVADSNSNWAVCGKSSGMVLMPMK
VNATHKVHIEVMPLFAGHLPFPKIKVLRYLPHTAALAIQPDPDSCVENDSLSLLDKTLDD
QGDTASIRSRGSVHSVGSGDQQQRGVAMPRLEAFSPGQVFNHSHTQQVLVLPATDDHIME
VNAT
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtcaagaggaaaggccaatcatctataccatggaaaacaagccgattgtaaca
tgtgcaggagatcacaacttgttcacatctctttatacatcattggctcaacaacttccc
agggagccaatggagtggaggaggacttacggccgtgcaccaaaaatgattcacctcgag
gctaattttgtccaatttaaagaggagctgctcccaaaggatggcaacaaggctcttctc
acctttccctttctccacatctactggaccgactgctgtgacacagaggcctataagagc
tcggtaaaggaggacatgctgcgctggcacaacagcctgaggacccacgggtcagcagac
tgggtcatcatcgtcgtcgagtccaatgacaccaagaagaagaacaaaaccaacatcctt
cctcggtcttccattgtggacaagatccgcagtgacttctgtaacaagcagaatgacagg
tgtgtggtgctgtctgaccctctgaaggactcttcccggtcacaggaatcctggaactct
ttgctgctgaaattgcgaaccctcctcctcatgtccttcacgaagaacttgggccgcttt
gaagacgacatgcgcacgctccgagagaaacgcacccagcctggctggagcttctgcgaa
tacttcatggtccaggaggagctggcctttgtgtttgagatgctgcagcagtttgaggac
gctttggtccagtacgatgaactagatgctctttttactcagtatgttcttaactttgga
gcaggagatacagccaactggctcggctcattctgcgctccagtccgtaactggagtggt
ttgcttctccgtcggcccatcgacatggaaaagagggatagtattcaacatgaagaagcc
agcctgttagatctgagaagctacctgttctcccgtcagtgcactttactcatcttcctc
cagagaccctgggaagtcacacagagagccttagagcttctccacaactgtgtgcaggag
ttacgtctgttggaggtgtccgtcgtggatggggctctggactgctgggtgttcctcagc
tgtttggaggttctccacaggattgagggctgctgcgatcaggctcagttagctgcaaac
tcctctcatactgtcggcctttgggcctacgctacagataagcttaagagtctgggggaa
ctctgtggtctggtatcagagaagggacccacatctgaggacctgaacaagactgttgat
ctgctcgcaggtttaggagacgagaggcctgagactgtgaacagcttacagagcccatac
aaaaagttgaaggaagctctgtcgtctgtggaagcttttgaaaggcattatcttgaactc
tctcatgccgcgatggaaatgtatcgggccattggccgcgtgaggtcggccagactggtg
gggaaaagtttggctgagttccacatgagaaaaggggaccccaagaaagccgaaacgttt
cttcaggaggctttgaagtcctacctgtcagaggggtggagcctcccagtgactcacacc
aggagacagatcgctgaatgtcagaaactgctggacagaaaggaggactacttgcaaacc
agtgccttgttggctggtgattcgaatctaagcactgaagagagaacgcacttttgccag
gaaatcctaaacttcgcaggaaagcctggaaatccttctcacaaagccactctcagtatg
agcgtttttgctcagctcacgcagctccagtttcaccccgcatgtgcgtcggtgcactcc
ggggcggccctgaaggtggagctcactctgagatgcatgatgcctatttcagttcacata
cagcaacttgctgctagcatccactttgatgtggatcacggagggactcacgggaggacc
aagagagcccagagacggaccaaccttggggtaatcgagtttaagatgggggattcttta
gcgggccttccctgctccgcggcgccgggcccctcgttagagctggacgaggttcaggac
aggagtccttcagacaattctctcaactccacaggagtggtctgtaaaaacacccacctg
ctcctgcaccaccatgagggcacttcccttcctgacacgctgaactgtgtcagccctcca
actgttacaatgaaggaaggagcgcagatgctgaaggtgcaggacgtcaccctggcgcct
ggaaataacagcatcgttttcacagcacccagcggacaagcaggcacgtacacgctgcgg
cagctgtgtgccaccgttggcgaggtgcagttcgtcttgtcccatatctacccatcggtc
cgctatgaagtgtattctcaggagccccagctcaccgtggagccgctctcagagcctctc
ctggccggtctgcctcagatggtgaagttcactctgctgacaggtcactacactgtgaaa
aagggggacgctctgcagctcagcaacgcagagaccctgcccatcctgccctccaccagc
tgcacggcccgcatcagcagccccactgctgagttggttagcgaaagcactctgtccatt
cagtcatctgagaaggtgaccagcatcagcctacctccaacccctccgtaccacgttctg
gagttccagctggaagtggtgtgcgtcatcccgtccgggtcggaacgccccgcgaacgag
aggctgacgaacggggaggtccgccatcgaccacgcagctacagccatccagacacgccc
atgactgccatcgaccagaggatgtccatcgactgtccgtggtccatctactccacacta
ctagctctcaccttctacatccccttcaagaccaaacactcgctgctttctgctggtaac
aggaagtacatccaggtgtgtgtgcagaatgtgtcagatgtgaacttcacactggcagag
gtgaagctgacggaaaagcagcacgcatcgctggagctacagtcccttaacactaaaacg
catcagctcctgtgcagtaaacacagcctgttctgcttgtgggaggtgagatggaaggat
gaactcccctcctgcatgaagtgtgttttctccgccagcttctccccgctcagccaggac
acctctgccttcaaacctttccactaccagttccagctggagagagtcactacattgtac
agtgttaaagcggagatctccccccctgctggggagcagcactgccgctccggtctcctc
tgtggactggaggtgtgcataacccgactgaccgagcctgcagagggggagatagctgag
gagagcaaaactgacccggacggcctcaaagtcaccaaacttatgtatgaagtggcggac
agcaacagtaactgggccgtgtgtgggaagagttcaggaatggtgttgatgccaatgaag
gtcaacgcaacgcacaaggtccacatcgaggtgatgcctctgttcgccggacacctcccc
ttccccaagatcaaagtcctgagatacctgcctcacactgctgccctggccatccagcca
gacccagacagctgtgtggagaacgacagcttgtccttgctggacaaaacgctggacgac
cagggggacacggcgagcatccgcagtcgcggtagcgtccattccgtcggcagtggagac
cagcagcagaggggagtggccatgcctcgcctggaggccttcagccccgggcaggtgttc
aaccacagccacacccagcaggtcctggtgctgcccgccacagatgaccacatcatggag
gtgaacgccacatga
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