Oryzias latipes (Japanese medaka): 101162779
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Entry
101162779 CDS
T02443
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101162779 (btaf1)
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
101162779 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_2
TPR_Trm732_C
TOR1L1_N
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
101162779
NCBI-ProteinID:
XP_011482334
LinkDB
All DBs
Position
15:3195256..3215809
Genome browser
AA seq
1856 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELHNLLAKVLTYLRSPNWDTRI
AAGQAVEAIVKNIPEWNPSPKPKEESCEDLSPEDSSSDRLSFYHFDISRLLKHGASLLGS
AGAEFELQEDKTGEMDPKERLARQRKLLQKKLGLDMGAAIGMDTEELFNDEDLDDTCQSS
VVKAHGVKVTAGCSSHNHLTIQAAELIDSEFRTGMSSRQKNKAKRMAKLVAKQRSRDVDP
NEKSNDSFEGEPEEKRRKTTNVVIDQPAAQPKVLIDNVPDTSSVLEESSEWPLESFCEEL
CNDLFNPSWEVRHGAGTGLREILKCHGAAGGKLVGSTAQQMSRQHQEWIEDLVIRLLCVF
ALDRFGDFVSDEVVAPVRETCAQTLGVALRHMNESGVFMTVNVLLKLLREDQWEVRHGGL
LGIKYALAVRQDLMGVLLPRVLPAITEGLQDLDDDVRAVAAAALIPVVDGLVQLQTNEVP
SIVNTLWDALLDLDDLTASTNSIMTLLSSLLTYPQVRLCSMQQSLTVLVPRVWPFLRHTI
SSVRRAALETLYTLLSTADQSCAVWINPIIQDMLRHIFQSCILESHEEILELIQKVWMEL
LFQAPQQYVVAASCPWMGAWLCLMMQASHIPIDQNMLLEVKARSKDKAGAKARLGNSQAK
ETVQEYIAGAETVADDPLTRDYVVVRARLMSAKLLGALCKCICDPQLNAATQEIRPAESL
AQLLLFHLNSKSALQRIAVALVLCEWAALQKDCQVVSSMVQPRLLAILAEQLYYDEIAIP
FTRMQNECKQLITLLADANIDLQDRFSCSVFTIDQANELVTTIFTESTVGLNLKTKLWPA
LNSKRQQAQSTVMETSSEWQQLHLRVHMFTACAVINLQVLPDKLNPLIRPLMEAMKKEEN
TLIQSYAASFIAKLLQQCAGRTPCPNPKIIKNLCSSACVDSAVTPSSACPVPSAPDDAKM
GALEKDGMHHMVNKTRGIITLYRHQRAAFAVTSKRGPAPKAPKTQSELPPGSSVGTDGDE
NKRPFLIQRRGAEFCLTTIARHFGGDLVKSLPYLWESTVGPLRTVLQGQCIDRQAQLEKG
DAAAQELVNSLQVLELMAAAMAPDLRPLLLQHLPHLFNCLQHLYTAVRHMAARCVGVLGK
IATLEVMNSFLECVLPWLAAIDDITKQEGAIEALACVMEQLEVDIIPYIVLLVVPVLGRM
SDPSDSIRFMATQCFATLIRLLPLEAGIPDPPAMSADLIRQKARERYFLEQLLDGRKLEN
YHIPVPIKAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRAQE
YAKTKAADCSPLPSLVVCPPTLTGHWVDEVGKFCTKEYLHPLHYTGPPSERMRLQHQVKK
HNLIVASYDVVRNDIDFFRNIKFNYCILDEGHIIKNGKTKLSKAIKQLAANFRLILSGTP
IQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAMEALHRQ
VLPFLLRRMKEDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKASVEDSISTASAEE
EEEKPKLKATGHVFQALQYLRKLCNHPSLVLTPQHPEYKRVTDQLAAQNSGLRDIQHAPK
LSALKQLLLDCGLGDGGGSETGTEAVVAQHRVLIFCQLKSMLDIVEHDLLKPKMPTVTYL
RLDGSVPAGLRHAIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQ
AMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTVINQENTSMQSMGTDQLL
NLFTLDQEEKDGKGEQSSSTSGKPSMKSVIDGLGELWDQQQYDTEYNLDSFMHSLH
NT seq
5571 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtcgagacttgaccgtttgttcatcctgctcgacaccggaacaacaccagtg
accaggaaagcagcagcccagcaactaggagaagtagtcaaactccacccacacgaactc
cataaccttctggcaaaggtcttaacgtatctaaggagtcccaactgggacactcgaatc
gctgcaggccaggctgtggaggccatcgtgaaaaacattcctgagtggaatccaagtcca
aagccaaaggaagagtcctgtgaggacctgtctccagaggattcgtcatcagaccgcctc
agcttctaccactttgacatctcgcgcttgctgaaacatggagcgtccctgctgggatct
gcaggggccgagtttgagctgcaagaggataaaactggggaaatggaccctaaggaacgc
ctggcccgacaaaggaagcttctgcagaagaagctgggcctggacatgggggctgctatt
ggaatggacacagaggagctctttaatgacgaggacctggatgacacctgtcagtcaagt
gtcgtcaaagctcacggagtgaaggtcaccgctggctgcagttctcataaccatctgacc
attcaagctgcagagttgatcgactctgagttcaggacgggcatgagcagtcgtcaaaag
aacaaagcaaagaggatggccaaactggtggcaaagcagaggtccagagatgtggatccc
aatgaaaagagcaatgacagttttgagggagaacctgaagagaaacgaaggaaaaccaca
aacgtggtcattgatcaaccggcagcgcagccaaaagtcttgattgacaacgttccagac
acctccagtgttctggaggagtcaagcgagtggcctctggagagcttttgtgaggagcta
tgcaacgatctgttcaacccgtcatgggaggttcgtcacggcgctggcacaggcctcaga
gaaatcctgaagtgtcacggtgctgctggtggaaagctggtgggaagcactgcacaacag
atgtctcggcagcatcaggagtggatcgaggatctggtcattcggctgctgtgcgtcttc
gctttggaccgctttggagactttgtctctgacgaggtggtggctcctgtcagggagacg
tgcgctcagacccttggtgtcgctctccgccacatgaacgaaagcggcgttttcatgacg
gtgaatgtcctgcttaagctgctgagggaggatcagtgggaggtccgtcacgggggcctt
ttaggcatcaagtacgccttggctgttcgtcaggacttgatgggcgtcctgctgccgcgg
gtgctccccgccatcactgagggtctccaggacttggatgacgatgtgagggctgtggcg
gcggctgcgctcatcccggtggtggacggcctggttcagctccagaccaatgaggtaccc
tccatagtaaacaccctatgggatgctcttctggacctggatgacctcactgcttccacc
aacagcatcatgacattgctgtcctcgctgctcacctacccacaagtgcgactgtgcagc
atgcagcagtcgctcactgtcttggttcctcgagtctggccgttcttaaggcacacgata
tcatcggtgagacgggcagcgctggaaactctctacacgctgctgtcaacggctgaccag
agttgtgcagtctggataaatcccataatacaagatatgctgcggcacatttttcagtcc
tgtattctggagagccacgaggaaatccttgaacttattcagaaggtgtggatggagctg
ctctttcaggccccccagcagtatgtggtggcagccagctgtccgtggatgggggcctgg
ctctgcctcatgatgcaggcctctcacattcctattgaccagaacatgctgctggaggtg
aaggctcgctccaaggacaaagctggtgcaaaagctcgtctgggtaacagtcaggcgaag
gaaactgttcaggagtacatagctggagctgagacggtggccgatgacccgctgaccagg
gactacgtggtcgtccgagcccgactcatgtcggccaagttgcttggcgccctgtgtaag
tgcatctgtgaccctcagctgaacgctgcaactcaggagatccggcctgctgagtctctg
gcccagctgctgctgttccacctaaactccaagtctgctctgcagcgcatcgctgtggcg
ctggtgctgtgcgagtgggccgcactgcagaaggactgtcaggtggtgtcctccatggtg
cagcctcgccttctggccattctggctgagcagttgtactacgacgagattgcaatccct
ttcacgcggatgcagaacgagtgcaagcagctgatcactctgctggctgatgccaacata
gaccttcaggatcgcttcagctgtagtgttttcaccatcgaccaggccaacgagctggta
accaccatatttaccgaatcaaccgtggggctgaatctgaagaccaaactgtggccggcg
ctgaacagcaaacggcagcaagctcagtctacagtgatggagaccagctcagaatggcag
cagctgcacctgcgtgtccacatgttcaccgcctgcgcagtcatcaacctgcaggtcctc
cccgacaaactcaaccccctgatcagacctctgatggaggccatgaagaaggaggagaac
actttgatccagagctatgccgcttccttcatagcaaagcttctccagcagtgtgctgga
cgcacgccgtgccccaaccccaagatcatcaagaacctctgttcctctgcctgcgtggac
tctgcagtcaccccctcatcagcctgtcctgttccgtctgcaccagacgatgccaaaatg
ggtgctttagaaaaggatggtatgcatcacatggtcaacaaaacgcgaggcatcatcacc
ctctaccgtcaccaaagggctgcttttgccgtcaccagtaaaaggggccccgcccctaaa
gcccccaaaacccagtcggagcttcctcccggcagctccgttggaacagacggtgatgag
aacaaaaggccgtttctcatccagagacgaggggcggagttctgtctgaccactattgcc
aggcactttggaggtgacctggtgaagagtctgccgtacctctgggagagcacggtggga
cccctaaggaccgtgttacagggtcagtgcatcgacagacaagctcagctggagaaagga
gatgctgctgctcaggagttggtcaactctctgcaggtgttggagctgatggctgcagcc
atggctcctgacctccgacctttgttactgcagcacctccctcatctgttcaactgcctc
cagcacctctacacggcagtgcgacacatggcggcgcgctgtgtgggcgtgctcggtaag
attgccactctggaggtcatgaacagttttctggagtgcgttctgccgtggttagccgcc
atcgatgacatcaccaaacaggaaggcgccatcgaagctttagcctgtgtcatggagcag
ctggaggtggacatcattccctacattgttctgctggtggttccagttttggggaggatg
agtgaccccagtgacagcattcgcttcatggccacacagtgttttgctacactcatccgc
cttctgccactggaggctggtattccagaccctccagcaatgtctgctgacctgattcgc
cagaaagccagggagcgctacttcctggaacagctgctggatggtagaaagctggaaaac
tatcacattccagttccaattaaagccgagctcaggaagtaccagcaggatggcgtgaac
tggctgtcattcctgaacaaatacaagctgcatgggatcctgtgtgatgacatgggtctt
ggtaagacgctgcagtccatctgcattctagcaggagatcactacctcagggcacaagaa
tatgccaagacgaaggctgcagactgcagccccctcccctctctggtggtgtgccccccc
acactgactggccattgggtggatgaagtgggaaagttctgcaccaaagagtacctccac
ccgctccactacacggggcccccgagcgagcgcatgcggttgcagcatcaggtgaaaaag
cacaacctcatcgtcgcctcctatgatgtcgtgcgaaatgacatcgacttttttagaaac
attaaatttaattactgtattcttgatgagggtcacatcatcaagaacggcaaaaccaaa
ctttctaaagccatcaagcagctggctgctaactttcgactcatcttatcggggactccc
atccagaacaatgtcttggagctgtggtcgctgttcgatttcctcatgccgggctttctg
ggaacggagcggcagtttgccgctcgctatggaaagccgatccttgccagcagagatgcc
aaaagctcttcacgggagcaggaggcgggggttctggccatggaggctcttcatcgacaa
gtgttgcctttcctgttgaggaggatgaaggaagatgtccttcaggatcttccaccaaaa
attattcaggactattactgcaacctgagtcccctacaggttcaactctatgaagacttt
gccaagtctagagccaaggccagcgtggaggacagcatctccacagcctctgctgaggag
gaggaggagaaaccaaagctgaaggccaccggacacgtcttccaggcgcttcagtacctg
cgtaaactgtgcaaccaccccagcctggttctgaccccacagcacccagaatacaaacgg
gtcacggatcagctggcagctcagaactcgggcctgcgtgacattcagcacgcccccaaa
ctctctgctctcaaacagctgctcctggactgtggtcttggagacggtggaggatcagag
acgggcactgaagcggtggtggcccaacatcgcgtgctgatcttctgccagctgaagagc
atgctggatatcgttgagcacgacctgctgaagcccaaaatgcccaccgtgacctacttg
aggttggacggcagcgtgccggcgggccttcgccatgccatcgtctccaggttcaacaac
gacccatccattgatgttctgctgttaaccactcatgttggcggtctgggcttgaacctg
actggtgcagacaccgtggtgtttgtggaacatgactggaaccccatgagggacctgcag
gcgatggaccgcgctcacaggataggacagaaacgcgtggtgaacgtgtaccggctgatc
accagaggtacgctggaggagaagatcatggggctgcagaagttcaaaatgagcatcgcc
aacacggtcatcaaccaggagaacaccagcatgcagagcatgggcactgaccagctgctc
aacctcttcactctggaccaggaggagaaggacggcaaaggcgagcagtcgtcttcaacc
tcagggaagccctccatgaaatccgtgatcgacggtctgggagagctgtgggaccagcag
cagtacgacaccgagtacaacctggacagcttcatgcactccctgcactag
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integrated database retrieval system
