Oryzias latipes (Japanese medaka): 101162792
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Entry
101162792 CDS
T02443
Symbol
abcf2
Name
(RefSeq) ATP-binding cassette sub-family F member 2
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ola03009
]
101162792 (abcf2)
Ribosome biogenesis [BR:
ola03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
101162792 (abcf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_22
MMR_HSR1
AAA_28
RsgA_GTPase
AAA_15
AAA_16
NACHT
VapE-like_dom
AAA_14
AAA_23
RNA_helicase
Dynamin_N
AAA_33
MukB
Motif
Other DBs
NCBI-GeneID:
101162792
NCBI-ProteinID:
XP_011487343
UniProt:
H2M8J8
LinkDB
All DBs
Position
20:21192669..21197116
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AA seq
611 aa
AA seq
DB search
MPSDLAKKKAAKKKEAAKARQRSKKPEDANEENDQAEPQENGADSNGVANLTKELDEFEL
RKTEARAVTGVLASHPNSTDVHISSLSLTFHGQELLSDTSLELNSGRRYGLIGLNGTGKS
MLLSAIGHREVPIPEHIDIYHLTREMAPSDKTALQCVMEVDEQRIMLEKEAERLAHEDSE
CEKLMELYERLEELDADKAQMRASRILHGLGFSPAMQQKKLRDFSGGWRMRVALARALFI
KPFMLLLDEPTNHLDLDACVWLEEELKSFKRILVLISHSQDFLNGVCTNIIHLHQRKLKY
YTGNYDQYVKTREELEENQMKRFNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLQK
MVASGLTEKVVNDKTLSFYFPPCGKIPPPVIMVQNVSFKYSDNTPHIYKNLEFGIDLDTR
VALVGPNGAGKSTLLKLLMGELLPTDGMIRKHSHVKIGRYHQHLTEQLELDLSPLEYMMK
CYPEIKEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCFAWLAWQNPHMLFLDEPTN
HLDIETIDALADAINEFEGGMMLVSHDFRLIQQVAQEIWVCEKQTITKWNRDILAYKEHL
KSKIEKQAHDI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcagatctggctaaaaagaaagcagcgaagaagaaggaggccgccaaagcccgc
cagcgctccaaaaaacccgaagacgcgaacgaggagaatgaccaggccgagcctcaggag
aacggagcggacagcaatggggttgccaacttgaccaaagagctggatgagtttgagctt
cggaagactgaagccagagcagtgactggagttcttgcctcccaccccaacagcactgat
gtccacatcagcagcctgtcgctcaccttccacggtcaggagctcctgtccgacaccagc
ttggagctcaactcgggcaggcggtatggtctcattggcctcaacggcacagggaaatcc
atgttgttgtcagccattggacaccgtgaagttcccataccagagcacatagatatttac
cacttaacccgggaaatggcccccagcgacaagacggctctacagtgtgtcatggaggtg
gatgagcagaggatcatgctggagaaggaggcggagaggctggcccacgaggactctgag
tgtgagaagctgatggagctgtatgagcgtctagaggagctggacgcagacaaagcacag
atgagagcttcccggatcctccacggtttgggtttcagtcctgctatgcagcaaaagaaa
ctacgggacttcagtggaggctggagaatgcgggttgctttggccagagctcttttcatc
aaaccattcatgctgctgctggatgaaccgaccaaccacctggacctggacgcctgtgtg
tggctggaggaggagctcaagtcgttcaagcgaatccttgtgctcatttcacactcgcaa
gacttcctgaatggcgtgtgcaccaacatcatccacctgcatcaaaggaaactgaaatac
tacacgggtaactatgaccagtatgtgaagaccagagaggagctggaggagaaccaaatg
aagcgcttcaactgggagcaggaccagatagcacacatgaagaactacatcgcccgcttt
ggtcacggttctgcaaagttggcccgccaggctcagagcaaagagaagacgctgcagaag
atggtggcgtcgggtttgactgagaaagttgtgaatgacaagactctgtcattttatttt
cctccctgtgggaagattcctccccccgttatcatggttcagaacgtgagctttaagtac
agtgacaacacgccgcacatttacaaaaacctggagttcggtatcgacttggacacccgg
gtggctctggtggggcccaacggagcgggcaaatccacgttactcaagctgcttatgggg
gagctgctcccgactgacggcatgatccgcaaacattctcacgtcaagatcggcagatat
caccagcatcttacggagcagctggagctcgacctgtctccactggagtacatgatgaag
tgttaccctgagatcaaagagaaggaggagatgaggaagatcatcggccgatatggtctc
acggggaaacaacaggtcagccccatccggaacctgtcggacggtcagaagtgtcgcgtt
tgttttgcctggctggcgtggcagaacccccacatgctgttcctcgacgaacccaccaat
cacctggacatcgagaccatcgacgctctggcagacgccatcaacgagtttgaaggtggt
atgatgctcgttagccacgacttcaggctgattcagcaggtggctcaggagatctgggtg
tgtgaaaaacaaaccatcaccaagtggaacagggacatcttggcatacaaggagcatttg
aaatcaaagattgaaaaacaggcgcatgatatctga
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