Oryzias latipes (Japanese medaka): 101162800
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Entry
101162800 CDS
T02443
Name
(RefSeq) ras and Rab interactor 3 isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101162800
Membrane trafficking [BR:
ola04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
101162800
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
RIN1
EcsC
Motif
Other DBs
NCBI-GeneID:
101162800
NCBI-ProteinID:
XP_011488959
UniProt:
A0A3B3H6K6
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All DBs
Position
22:20882113..20906028
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AA seq
1038 aa
AA seq
DB search
MMEASIVSQDPGLTRPVTGALESAAIPSPSIHPQPPGRPCRPRPPTSTSKSSMLPSRPPL
PASSAANLPSASIRSMSLSSNPPPPSLPPPLSPIIVTQFPQQSSSGPVPFLSPPLSLPPP
LSPTDSPTPCSSQSPPPGPVIPLPSPAPPVLSSLDKLVGSVSIWQLEGLTPEKTAGILEK
EAAGMFLVHSTDGQATAVSVRLPEEQGAPRVLSLMLTQHRDFIHLEGSALVFDDIFQLIL
FYCSSRDILTVLLRLPQAVTTTTQREELQVISAMGADFWTSELNQKLKERTNALQLITYL
HVSPVTVEERSTTQLNLPRTPKRDSATGEHVTSCLQNGQTSQSVSAHGNNSAKRFKRPPP
RPPSLDSGVGLLFSSSSLPQNSTYATHQTETKEGGREQAGKVKERRSVPPPSRPPVPLQG
RCAPCLPPAPLPGVCPRKQTDQDEGEKTGREENQNPAIETKKEQIEEKGEEKTEGAGPPT
ENATQGARSPCEEEELTKEEQEVKMEEKEVKLTEDKQQSSSPCPQLSKRPSRPIPPPRTK
AISTGPGMKGQPPQAARRSDVSLFSPQGGAALGADQDSCDTSSTEEEGEPSQEQGPNCKN
LTESCSPKTVLRRTPTTFMLHKARHLSAVVSGLISHDRRLTKRLVELARDPLSYFGNLVK
EHRAFTLETMMKHMTSTELLQEIRLMMTQLKNYLLQSSELQAMLEPQQCTQDKLESIVEA
ALCKSVLKPLREPIYKTLEKLHTDAGCTKQLASNQSAILGSTTTALGITTSVPEAPALEK
ISIKLNDLHQEYSPQRKIQLLLKTCKIIYDSMSVSHPGRAHGADDFLPVMMYVLARSNLS
ALQLDVEYMMELMDPTLTLGEGSYYLTTTYGALEHIKTFDQQRSVTRQLSREVQDSIHRW
ERRRTLNQEQSGQGSVRDFLTVYCPAFGTNPKTMGIFPSMTMQQLAEQCAARYEQDSYIL
SVYMDGVRQPISPTDLALSVKNGCLPGAYCFLFHPVNQPGGQRSCPTDPPPDPPAGSRPT
ANLTRNTEPEVEETLINL
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggccagcattgtttctcaggacccaggccttacaagacctgtgacgggagcc
ctagaatctgcagccatcccgtctccttcaatccacccacagcctccaggacgaccatgt
cgacccagacccccaactagcacgtcaaagtcctccatgcttccctctagacctcctctt
cctgcctccagcgctgctaacctcccttctgcttccatccgttcaatgtctctgtcttct
aaccctcctcctccatctcttcctcctcctctttctcccatcatagtcacccagtttcct
cagcagtcctcttcaggtccagtgccttttctgtctcctccactttccttaccacctccc
ttatctcccacagactcacctactccgtgctcctcacagtctcctcccccaggccctgtt
atccccttaccctccccagctcctccagtgctcagctctctcgataagctggttgggagc
gtttctatttggcagcttgaaggactcactccagaaaagacagcgggaattctggaaaaa
gaggctgcagggatgttcctggttcacagcacagacggacaggcgacggcggtttctgta
cgccttccggaggagcagggagcgccgcgcgtgctcagcctgatgctcacacagcacagg
gacttcatccatttagagggttctgctctggtctttgatgatatttttcaactcatcctc
ttctactgttccagcagggacatcttgaccgtcttgctaagattacctcaggccgttacc
acgacgactcagagagaggagctgcaagtcatctcagccatgggtgccgatttctggacg
tctgagctgaaccaaaaactgaaggagaggacaaacgcccttcagctgatcacttatctc
cacgtgagcccagtgactgtggaggagcggtcaaccacccagctaaacctgccccgcact
cccaaaagagattctgcaactggcgaacatgtcacctcctgtttgcagaatggacaaacc
tcccagagcgtcagcgctcatggcaacaattcagcaaaaaggttcaagcgacccccaccc
cgaccccccagcctagactcgggtgtgggccttctcttctcttcttcctctcttcctcaa
aactccacgtatgcaactcaccaaactgagacaaaggaaggaggaagggagcaagcaggc
aaggtgaaggagaggaggtcagtcccacctccatcaaggccccccgttcccctgcagggc
cggtgtgctccctgtctgcctcctgctcctctaccaggtgtctgccccagaaaacaaaca
gatcaggatgaaggagagaagacaggcagagaggaaaaccaaaatcccgccattgaaacc
aagaaagaacaaatagaagagaaaggagaggaaaaaaccgaaggagcaggccctccgact
gaaaacgccacacaaggagcaaggagtccatgtgaggaggaggagctgaccaaggaagag
caagaggtaaagatggaggaaaaagaagtgaaactgacggaggacaagcagcagtccagc
tctccatgtccacagttatcaaaaaggccgagtcggccaatccctcccccaagaacaaaa
gccatttccaccggtcctgggatgaaaggacagcctccacaagctgctcgccgctcggac
gtgtcgctgttctcaccgcagggaggggcggctctgggagctgaccaggactcgtgtgac
accagcagcaccgaggaggaaggagaaccgagccaggaacagggcccaaactgcaagaac
ctcacagagagctgcagccccaaaactgtcctcaggagaacccccactaccttcatgctg
cacaaagctcgtcacctctctgcagtggtcagtgggctgatcagtcatgaccgccgcctc
accaagcgccttgtagagctggccagagaccctctgagctactttggtaacctagtcaaa
gagcacagagctttcactttggagaccatgatgaagcacatgacctccactgagctgcta
caggagatccgactgatgatgactcagctgaagaattaccttctccaaagctcagagctg
caggccatgctggagcctcagcagtgcactcaggacaaactagagagtattgtagaagcg
gctctgtgcaagagtgtcctgaagccgctgcgtgagcccatctacaaaactctggagaaa
cttcacacggatgccggctgcacaaagcagctagctagcaaccagtctgctattctcggc
agcaccaccacagctttaggaataaccacctcggtccctgaggcccccgctttggagaag
atcagcattaagctgaacgatcttcatcaggagtattctcctcagaggaagatccagtta
ctgctgaaaacctgcaaaatcatctatgactccatgtctgtgagccatccagggcgggcc
cacggtgctgatgacttcctgcccgtcatgatgtacgtccttgccaggtccaatctgtct
gccctacagctggatgttgaatacatgatggaattgatggacccaacattaacacttgga
gaaggctcttactacctgaccacgacctacggggctctggagcacataaagacatttgac
cagcagaggtcagtaacacggcagctgagcagggaggtccaggactccatccaccgctgg
gagagacggcgcaccctcaaccaggagcaaagcggccaaggatctgtccgcgattttctg
accgtgtattgtcctgcctttggaaccaaccccaaaactatggggatcttccccagtatg
accatgcagcagctcgctgagcagtgtgcagcacgctacgaacaagactcctacatcctt
agcgtgtacatggatggggttcggcagcccatttcccccacagacctcgctctcagtgtc
aagaatggctgcctgccgggcgcctactgtttcctctttcatcctgtcaatcaacccggc
ggccaacgctcctgcccaactgaccctcccccggatccacccgcaggaagccgtcccaca
gctaacctcacaagaaatacggagccagaagtagaagagactctgattaacctctaa
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