Oryzias latipes (Japanese medaka): 101162850
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Entry
101162850 CDS
T02443
Name
(RefSeq) glial fibrillary acidic protein
KO
K05640
glial fibrillary acidic protein
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101162850
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ola04812
]
101162850
Membrane trafficking [BR:
ola04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
101162850
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
101162850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
HALZ
Phage_GP20
KASH_CCD
Cnn_1N
GIT_CC
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
101162850
NCBI-ProteinID:
XP_004073228
UniProt:
H2L6N1
LinkDB
All DBs
Position
10:9868389..9885600
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AA seq
383 aa
AA seq
DB search
MLRVSSYRKLFEQENWGRNGGLSVQCAGQYRLPVRGAVTDECCCGDKLDFVAAKALNKEG
LNRFVQERSTIAFLNDRLVRLIEVAHCFEEQNEALQCQITELEEKLTSQNADSSIKVKEH
DCSLDAVVERLRVQRDEVLGDTQKLKKELEHLKEEYEWIEQQKMLIWQEQNDVATEVDAV
TAECLALKEQVAIYEDQLAVMGAQHKEEVESLLEPDERTLAAAAITFGSPDIAPALNVKE
YHCQLAKSLQFERGTSSALAVRRDGEKLEEGRTAGSKVKDLPEDASELKTLISELQKELC
DLEKDNEELEDEVELRSSAHMEEVADLECSIVEMRQQEADLEVQMREQCDDYKELLNEKM
ARDMEIAAYRSLVEEEEGRFCSL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgctgagggtgtcttcctaccgaaaactctttgagcaggagaactggggtcggaatggg
gggctgagtgtgcagtgtgccgggcagtaccggctccccgtcagaggcgcagtcactgac
gagtgttgctgtggcgacaagttagactttgttgctgccaaagctctgaacaaagaaggt
ctgaaccggtttgttcaggagcgcagcaccatcgcttttctgaatgaccgcctggttagg
ctcattgaagtggcccactgctttgaggaacagaatgaagctcttcaatgtcaaatcact
gagctggaggagaagctgaccagtcaaaatgccgactctagcatcaaagtgaaggagcac
gactgcagcctagatgctgtggtggaaagactgcgcgtgcagagggatgaggtgttgggt
gacacacagaaactgaaaaaagagcttgaacatctgaaggaagaatatgagtggattgag
cagcagaagatgctcatctggcaggagcaaaatgatgttgccacggaagtagatgctgtg
acagcagagtgtctggcactgaaggagcaagtagctatctatgaagaccagctggctgtc
atgggagcccagcacaaggaggaagtggagagtctcctggagccagatgaaaggactctg
gcagcggcggctattacatttggcagccctgatatcgctccggccttgaatgtgaaggag
taccactgccagttggccaagagccttcagtttgagcgtggcacatcctccgctctggct
gtcagacgtgatggagagaaactggaagagggaagaactgcagggtcaaaagtcaaagac
ttgccagaggatgcaagtgagctgaagacactgatttcagagctccagaaggagctctgt
gacttggagaaggataatgaagagctggaggacgaggttgagctcaggagctctgcacac
atggaggaagtagctgacctggagtgctctatagttgaaatgaggcagcaggaggccgac
ctggaagtacagatgagggagcagtgtgatgactacaaggagctgctgaatgagaagatg
gccagggacatggagattgctgcctacaggagtctggtggaggaagaggagggcaggttc
tgcagtctgtga
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