Oryzias latipes (Japanese medaka): 101162870
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Entry
101162870 CDS
T02443
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04814
Motor proteins
ola05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
101162870
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101162870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101162870
03036 Chromosome and associated proteins [BR:
ola03036
]
101162870
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ola04812
]
101162870
Membrane trafficking [BR:
ola04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
101162870
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
101162870
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
101162870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
dbPDZ_assoc
Gemin7
DUF7259
Motif
Other DBs
NCBI-GeneID:
101162870
NCBI-ProteinID:
XP_011485620
LinkDB
All DBs
Position
18:7099853..7117315
Genome browser
AA seq
1296 aa
AA seq
DB search
MALNRRHSYTPRLTSPLISKMSSAGSVESGKPPKIGSVVEVTGKGQRGTVAYIGTTLFAS
GKWVGVILDEPKGKNDGTVQGKRYFTCEENHGIFVRQSQIQVVDEGSGSTSPETPESTLA
KILKQKEMAETPKTTKQTPANLKKSSTRRSAKWSLPRLAPASSLPSLLGRRSSSMLTASR
ESLSSSHSGDLSEASLHSQQGALGAPVVPQPSGSPAAAAPATPSKVEPAMSKQEEESLRA
QVKDLEEKLETLKMKRTEDKAKLKELEKHKIQLEQLQEWKTKMQEQQAELQKQLKEAKKD
AREAQEAKDRYMEEMADTADAIEMATLDKEMAEERAESLQVEVDTLKEKVEELSMDLELL
RHEISEKGSDGAASSYQVKQLEEQNGRLKEALVRMRDLSASEKQEHVKLQKQMEKKNAEL
ETLRTQKEKLQEELKQAEATIDELKEQVDAALGSEEMVETLTERNLDLEEKVRELRETVT
DLEAINEMNDELQENARETEMELREQVDLSGAKVREAEKKVEAAQETVADYQHTINKYRE
LTASLQGANRELVSQQSANAEQFQQPTAELFDFKIKFAETKAYAKAIEMELRKMEVAQAN
RHVSLLTSFMPDSFLRHGGDHDCILVLLLIPRLICKADLISKQAQEKFDLNGTPVQGSGL
RGPPGEQRSFASGLVYSLSLLQATLHRYEQALNTCSVDVFKRMGTLYSEMSFHERALDYF
IDLLHKDQLDETVQGEPLTKAIKYYQQLYSVHLADQSEDCTVQLADHIKFLQSALDCMGV
EVARLRAFLAAGQESSGLAVLLKDLDTSCSDIRQFCKKIRRRMPGTDVAGVPAALSYGAQ
VSETLTECRRQLTCAVAVLQEVAATGAQLVASLGEQEGLNALKLEDIVCKAVEKVGSSQS
VKGPEFLRQSCSAVIATMNKMSTAMQEGEYDAEKPQGQAPPVEVRASTVRAEMTDAEGLG
VKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDTSTKDADDRVEKIQTKLDENL
ALLKKKEKEFEETMDALQADIDQLEAEKAELKLRITNQSKMTIEGLRAPPTSGIASIVQG
SAGDANGLLTPAGLAPPMPGAMQVVDSPLLRQQVEAQRMGIKFLKNENNRLKAEKMRAQL
ASLPPLCPPKLPLAPRDSAVPPVGLNTVTYRRTDQLLTTLLRLSAEVKVVDITGKTTVSA
SAQLLEQTARLKNLSDALDKLKGEVAEHVVSHQPGARASSDFATFPMSSFVKAKEKQGGT
VFVGRVGIPCARGQEHVHRLVLSQQQLQQVHRLLAI
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggctctaaatcgacggcattcttacactcccaggctgacgagcccactgatcagcaaa
atgagcagcgcgggatcagtggagagtggtaaacctccaaagatcggctccgtagtggag
gtgaccggtaagggacagcgaggcactgtagcctacattggcaccaccctctttgcctcg
ggcaaatgggtgggggtcatcttggacgagccgaaaggcaagaacgacggaacggtgcag
gggaagcgctacttcacctgcgaggagaatcatggcatcttcgtcaggcagtctcagatc
caagtggtggacgagggctccggctccacctcaccagaaactccagagtccactttggca
aagatcctgaagcagaaagaaatggcagaaactcccaaaacaacaaagcagacgccagca
aaccttaagaagtcctctacccgccgctctgcaaagtggagcttgccacgcctggctcca
gcctcctccctgccctctctattgggtcggcgctccagctccatgttgacggcgtcccgc
gagagcctctcatcctctcactctggagacctcagcgaggccagcctccactcccagcag
ggggcgctgggcgctccggtcgtgccgcagcccagtgggtcgccggctgccgcagctcca
gctacaccgagcaaagtggagcctgccatgtccaagcaggaggaagaatcgcttcgagct
caggtcaaagacctggaggagaagctggaaacgttgaagatgaagaggacggaggacaag
gccaagctgaaggagctggagaagcacaagatccagctggagcagctgcaggagtggaag
accaagatgcaggagcagcaagcagagctgcagaaacaactcaaagaggccaagaaggat
gctcgggaggcgcaggaggccaaggatcgctacatggaggagatggcggacactgcagac
gcgatagagatggccacgctggacaaggagatggccgaggagcgagcggagtcgctgcag
gtggaggtggatacgctgaaggagaaggtggaggagctctccatggatctggagctgctc
agacatgaaatttcagagaaaggttcagacggagccgcctccagctatcaggtgaagcag
ctggaggagcagaacggcagactgaaggaggctttggtcaggatgcgggatctgtccgcc
tcagagaaacaggaacacgtgaagctgcagaagcagatggagaagaagaacgccgaactg
gagacgctgaggactcaaaaggagaaacttcaggaggagctcaagcaagcggaggccacc
attgacgagctgaaggagcaggtggatgctgcgctggggtccgaggagatggtggagacg
ctgacggaaaggaacctcgacttagaggagaaagtccgagagctgagagaaaccgtcacc
gatctggaagccatcaacgagatgaacgatgagctgcaggagaacgcccgagagacggag
atggagctgagggagcaggtggacctgagtggagcgaaggtccgggaggccgagaagaag
gtggaagccgctcaggagaccgtcgccgactaccagcacaccatcaacaaatacagagag
ctcaccgcctcgctacagggggccaaccgagagctggtcagccagcagagcgcaaacgca
gagcagtttcagcagccaaccgctgagctgttcgacttcaagatcaagtttgcagagacc
aaggcctacgccaaggccatagagatggagctgaggaagatggaagtggctcaagccaac
agacacgtctccctgctcacctccttcatgccggactccttcctgcggcacggcggagac
cacgactgcatcctggtgctgctgctcattcccaggctcatctgcaaggccgacctgatc
agcaaacaggcgcaggagaagtttgacctgaacgggaccccggtgcagggctcggggctc
agggggcctccaggagagcagcgcagctttgcctctggactggtgtactccctcagcctc
ctgcaggccaccctgcaccgatacgagcaggctctgaacacgtgcagcgtggacgtcttc
aagcgcatggggacgctctactccgagatgagcttccacgagcgcgctctggattatttc
atcgacctgctgcacaaagaccaattagacgagacggttcaaggagaaccgctgaccaaa
gccatcaagtactatcagcaactgtacagtgttcatttggcggatcaaagcgaggattgc
acagtccagctggctgaccacatcaagttcctgcagagcgccctggactgcatgggcgtg
gaagttgctcgtctgcgggcgttcctggcggcgggtcaggagagttctggtttggcggtc
ctcctgaaggacctggacacctcctgctccgacatccggcagttctgcaagaagatccgg
cgccgcatgcccggaaccgacgtggcgggagtccctgctgccctcagctatggcgcgcag
gtttcggagacgctgactgagtgcaggcggcagctgacatgtgcggttgcagtcctgcag
gaagttgctgcaactggagctcagctggttgcttctctgggagaacaggaaggcctgaac
gccctcaagctggaggacatcgtatgcaaagctgtggagaaggtcggcagctcccaaagc
gtgaaaggtcccgagtttctgcgtcagtcctgcagcgccgtcatcgcgaccatgaacaag
atgtccaccgccatgcaggaaggggagtatgacgctgagaagcctcagggacaggcccct
ccggtagaggtgagagcttccaccgtcagggcggaaatgaccgacgcagagggtctagga
gtcaaactggaggacagagaaacggtcatcaaggagctcaagaagtccctgaagattaag
ggtgaagagctgagtgaagccaacgtccgcctgagcctcctggagaagaagctggacact
tccaccaaagacgcagatgatcgggtggagaagattcagaccaagctggacgagaacctc
gccttgctcaagaagaaggagaaggagtttgaggagaccatggacgccttgcaggctgac
atcgaccagctggaggcggagaaggccgagctgaaactgcgcatcactaatcagtcgaag
atgaccatcgaaggcctgagagccccgcccacctccggaatcgcctccattgttcaggga
tctgcaggagatgctaacggtctcctgactccagcaggtctggctccgcccatgccgggc
gccatgcaggtggtggactcgcctctcctcaggcagcaggtggaggctcagagaatgggc
atcaagttcctgaagaatgagaacaacaggctgaaggcagagaagatgagggctcagctc
gcctccctgcctcccctctgccccccaaaactcccgctagcgcccagggacagcgccgtg
cccccagtggggctgaacaccgtcacctaccgcaggacggaccagctgctgaccactctg
ctcaggctgagcgccgaggtcaaagtggtggacatcaccgggaagaccacagtcagtgcc
agtgcccagctgctggagcagaccgctcgactgaagaatctcagcgacgctctggacaaa
ctgaagggggaagttgcagagcacgtggtttcacaccagccaggagccagagcctcctca
gactttgccaccttccccatgtcctccttcgtcaaggccaaggagaagcagggaggaacg
gtgtttgtgggccgcgtggggatcccatgcgcacgtggacaggagcacgtccaccgcctg
gtcctgtctcagcagcagctccagcaggtccaccggctcctcgccatctag
DBGET
integrated database retrieval system
