Oryzias latipes (Japanese medaka): 101162960
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Entry
101162960 CDS
T02443
Symbol
rhbdl1
Name
(RefSeq) rhomboid-related protein 1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ola01002
]
101162960 (rhbdl1)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
101162960 (rhbdl1)
Peptidases and inhibitors [BR:
ola01002
]
Serine peptidases
Family S54: Rhomboid family
101162960 (rhbdl1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
DUF5580_M
DUF5580
Motif
Other DBs
NCBI-GeneID:
101162960
NCBI-ProteinID:
XP_023804912
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All DBs
Position
19:9198346..9242810
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AA seq
372 aa
AA seq
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MDRSSLFQLIQEQLDPENTGFIPVENFTSLVEHHELQLDPSKLDMLLALVQSNEEGQVCY
QELIELMSSKRSSSFRRAIANGRRTLQREILLDETGLGLYKRFVRYVAYEILPCETDRRW
YFHQNRLCPPPVFIAIVTIVQIIVFMCYGIMLNKWVLQTYQPDFMKSPLVYHPGHRAQVW
RFFSYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISLLYMAGVLAGSLTVSITDMRA
PVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMILALVCMSSEVGRAVWLRFSPPLP
SSGPQPSFMAHLSGAVVGISMGLLILRSYEESLQKQCSWWVIVFSFITFLLFAIFWNIFA
YELLGVQIPPPP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggatagaagctccctgtttcagctcatacaagagcagttggacccagagaacaccggt
ttcatcccagtggagaacttcaccagcttggtggagcatcatgagctgcagctggatcca
tccaaactggacatgttgttagcccttgtccagagcaatgaggagggacaggtgtgctac
caggagctcatcgagctgatgagcagcaaacgctccagcagtttccgacgagccatagcc
aacggtcgccgcacgctgcagcgggagatcctgctagacgagacgggcctgggtctgtac
aaacgttttgtccgctatgtggcctacgaaatactgccctgcgagacagaccggcgctgg
tacttccatcaaaaccgcctgtgtcctcctccggtcttcatcgccattgtcaccatcgtc
cagattattgtgttcatgtgttacggcatcatgctcaacaagtgggttctgcagacatat
cagcctgacttcatgaaaagcccactggtttaccatcccggccaccgagcccaagtgtgg
cgtttcttcagctacatgttcatgcatgttggtttggagcagttaggattcaacgcttta
ctgcagctgatgataggtgttcccttggagatggtccatggcatattacggattagtttg
ctttacatggcaggagtcctggctggctcgctgacagtgtccatcacagacatgcgcgct
ccagtggtggggggttctgggggagtctacgctctgtgctcagctcatctggcgaatgtc
gtcatgaactgggctgggatgcgctgtccgtacaagctgctccgcatgatcctggcactg
gtttgcatgagctcagaggtgggtcgcgcagtctggctccgcttctcaccgccgttgccc
tcgtcaggtccgcagcccagcttcatggctcacctgtcgggggccgtggtcggcatcagc
atggggctgttgatcctgcgcagctatgaggagagtctgcagaaacagtgctcctggtgg
gtcatcgtcttctccttcatcaccttcctcctctttgccatcttttggaacatcttcgcg
tatgagctcctaggtgtgcaaatccctcctcccccctga
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