Oryzias latipes (Japanese medaka): 101163001
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Entry
101163001 CDS
T02443
Symbol
lingo1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101163001 (lingo1)
Membrane trafficking [BR:
ola04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
101163001 (lingo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_1
Ig_3
LRR_9
Ig_2
ig
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
101163001
NCBI-ProteinID:
XP_011474143
UniProt:
A0A3P9JEJ1
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Position
6:complement(9646235..9841870)
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AA seq
615 aa
AA seq
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MAAREATGHSYLVACWRPILILMLGTVLSGSTIDCPARCECNSQDHSVLCHRKKLMSVPE
GIPPDTRLLDLSKNRIRTINPDEFANFLSLEHLELSENTISTIEPGAFNNLPGLRTLGLR
SNKLKLIQLGVFTGLSNLTELDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF
HGLSGLEHLSLEKCNLSSVPTEAFTHLHNLITLRLRHLNINIIRDYSFKRLYRLKVLEIA
NWPYLDTMTPNCLYGLNLTSLTIASANLTTIPYVALRHLVYLRFLNLSYNPIHTIEGNKL
HDLLRLQELHLVGGRLAMIEPYSFRGLNYLKILNVSGNTLSTLEESAFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNKQQPTCASPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKPQQKFVDEGAIVHFACQADGDPAPVIMWLSPQKKFITTKTIGRLSVLPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTSPAHLHIHSYSPDWPQQPNKTFAFISNQPAETGANGTRAN
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGMS
STTVDAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcagccagggaagcgactgggcacagctacctggtggcttgctggcggcccattctg
atcctgatgctaggaactgtactgtctggctccaccatagactgcccagcacgatgtgaa
tgcaactctcaagatcactcagtgttgtgccaccgcaagaagcttatgtcagttcctgag
ggcattcctcctgacacaagactgctggacctcagcaagaaccgtatcagaaccatcaat
cctgatgagtttgccaactttctcagccttgaacacctggaactaagtgaaaacaccatc
tctacaattgaacctggagcgttcaacaaccttcccggtttgcggacattggggttgcgt
agcaacaagcttaagttgatccaactgggtgtttttactggcctgagcaatctcacagag
ttggacataagtgagaacaagattgtaatcctgttggactacatgttccaggatttgtac
aaccttcggtctttggaggtgggggacaatgacctggttttcatatcccacagggctttt
catggcctaagcggccttgagcacctaagtcttgagaagtgcaacttgtcctctgtgcca
actgaggcttttacccaccttcataatttgatcactctgaggctgcgccacctcaatatc
aacatcatacgggattactctttcaaacggctctatcggcttaaagtgctggaaatagcc
aactggccgtacttggatacaatgaccccaaattgcttgtatggattaaatctcacctcg
ctgaccattgccagtgctaacctgaccacgatcccttatgtggccctgcggcacttggtt
tacttgcgctttctgaatctttcttacaaccctattcataccattgaggggaataagctt
catgatctactgcgcctccaagaattgcacctggttggaggcagactggctatgattgag
ccctactcctttcgtggtctgaactaccttaaaatcctaaatgtgtctgggaacactctt
agcactttagaagagtctgctttccactcagttggcaacctggaaacccttgcgttgtat
gataatcccttggcctgcgactgccggcttttatgggtgttccgacggcgttggcggctt
aattttaacaaacagcagcccacctgtgcctcccccgagtttgtccaaggcaaagagttc
aaggatttcccagatgttctgcagccaaactacttcacctgccgcaagtctaggattagg
gatcgcaaaccccagcagaaatttgtcgacgagggagccattgttcattttgcttgccaa
gcagatggagatccagctccagtaattatgtggctttcaccgcagaaaaagtttatcacc
accaaaacaattggaaggctttctgtgttgccagatggcaccctcgaggttcgctacgcc
cagattcaagataacggcacttatgtatgcatagccagcaatgcaggcggaaatgacacc
tcacctgctcaccttcacatccacagttactcacctgactggccgcaacaacccaacaaa
acctttgctttcatttccaatcagcccgcagagactggtgctaatggtacaagagccaat
gtccctttcccatttgatataaagacactgatcattgcaaccaccatgggtttcatctcg
tttcttggtgttgtcctgttttgtctggtactactgttcctttggagcagaggcaaaggc
aacaccaagcacaacattgagattgagtacgtgccacggaaatcagacgctggcatgagc
agcaccacagtggatgctcctcgcaagtttaacatgaaaatgatttaa
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