Oryzias latipes (Japanese medaka): 101163016
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Entry
101163016 CDS
T02443
Symbol
usp20
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20
KO
K11848
ubiquitin carboxyl-terminal hydrolase 20/33 [EC:
3.4.19.12
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ola01002
]
101163016 (usp20)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101163016 (usp20)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101163016 (usp20)
Peptidases and inhibitors [BR:
ola01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101163016 (usp20)
Ubiquitin system [BR:
ola04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101163016 (usp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
101163016
NCBI-ProteinID:
XP_011479841
UniProt:
A0A3B3I582
LinkDB
All DBs
Position
12:complement(7737565..7755977)
Genome browser
AA seq
944 aa
AA seq
DB search
MAEQDVCPHLDSIGEVTKDDLLKKSKGTCQSCGAGGPNLWACLQSDCPYVGCGESHSDHS
TLHAQAKKHNLTVNLTTFRIWCYTCEREVFLDQRPALVPVPSAPHHCKAAEQDGAPQSGC
RPLKAVPIAVAEEDGSESEEDELKPRGLTGMKNIGNSCYMNAALQALSNCPPLTQFFLDC
SGLVRTDKKPALCKSYQKLISELWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFL
RCLMDQLHEELKEPLTECNMSGEGSDGEDRRDGDCSPSEDEFLSCDSGSSSDRGEGGGVG
DGELLLLDDCDGVRSPSVGLGGSATLISEKERLKEKRVSGSPLRGASQEMDEDADVDTAA
EEGAPERGEEEEEEEEEEEPGPPSNADIQNQDNNQISNTGQVQRNNTSEPNNEAPMTQPQ
STPCSPVRTLQELHHKLSSSPPRSSPLRSAGPAYSLKKAQLLLSSRKKKQSHYRSVISDI
FDGSILSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSSIHQNLPVKTGVCPDSYS
SQGWISFIMDSIRRFVVSCIPTWFWGPMVTLEDCLAAFFAADELKGDNMYSCERCKKLRN
GIKYCKVLKLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDMRPFLAKESPSQVTTYD
LLSVICHHGTAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSSDE
AVRERQKVVALANMKEPSLLQFYISREWLNKFNTFAEPGPISNQTFLCQHRGIPPNKYHY
IDDLVVIVPQNVWEYLYNSFGGGPAVNHLYICGICQVEIETLAKRRKTEIDTFIKLNKEF
QAEEAPTVILCISMQWFREWESFVKGKDNEPPGPIDNSKICVMKGGHIQLKQGADYGQIS
EETWQYLLGIYGGGPEIAVRQTVAPADPDSLHGERKIEAETRAL
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcaagacgtttgtcctcacctggactccataggtgaggtgaccaaggatgat
ctactgaagaaatcaaaggggacttgtcagtcatgtggtgctggggggccaaacctgtgg
gcctgtctgcagagtgactgtccttacgttggatgtggagagtctcattctgatcacagc
accttgcatgcacaggcaaaaaagcataatctgacggtgaacctaacaaccttcaggatc
tggtgttacacatgtgagcgggaggtctttctagaccagagaccagccctggtccctgtg
ccttctgcacctcaccactgcaaagctgcagagcaggatggagctccacagtctggatgt
cgcccactgaaagctgttccaattgccgtggcagaagaagacggctcagaatcagaagaa
gatgagctaaaacctagaggtctaacaggaatgaagaatattggaaactcctgctacatg
aatgctgctctgcaagctttgtccaactgccctcccctcacccagtttttcctggactgc
agcggtctggtccggactgataagaagcctgctctgtgcaagagctaccagaaactcatc
tcagagctctggcataagaaaaggcccagctatgtcgtgcctaccagcctctcccacggt
atcaaactagttaaccccatgtttcgaggttatgcacagcaggacacccaggagttcctg
cgctgtctgatggaccagttacacgaggaactgaaggaacctctgaccgagtgcaacatg
agcggggagggaagcgacggcgaggacaggagagacggggactgttccccatcagaggac
gagttcctgtcctgtgactccggctccagcagtgatcggggagagggaggaggcgtaggg
gatggagagctcctcctgctggacgattgcgatggagtgaggtctccctctgtagggtta
ggcggttctgccacgctcatctcagagaaagagaggctaaaggagaagagagtgtcgggg
tcacctcttcggggagcctcgcaggagatggacgaggacgccgatgtggacacggctgct
gaggagggagctcctgagagaggggaggaggaggaggaggaggaggaggaggaggagccg
ggaccaccctcaaacgcagacatccaaaaccaggacaacaaccaaatatcaaacacagga
caggtccagaggaacaacacgtcagagccaaacaacgaagcaccaatgacccaacctcag
tctactccctgcagccctgtgcgaaccctgcaggagcttcaccacaagctttcatcaagc
cctccacgctccagccccctccgctcggcaggtcctgcatactcattaaaaaaagctcag
ttgctgctcagttccaggaagaagaagcagtctcactatcggagcgtgatctctgacatc
tttgacggttccattctcagcttggtccagtgtttaacctgtgacagggtttctaccact
gtagaaaccttccaggacttatctctccctattccgggaaaagaagacttggccaagctt
cactcctccatccatcaaaaccttccagtcaagactggtgtgtgtcctgactcgtacagc
tcgcaggggtggatctccttcatcatggattctatacgcaggtttgttgtctcatgtatc
cccacttggttttggggccccatggtgaccttggaggactgcctcgctgccttttttgct
gcagatgagctcaaaggagacaacatgtacagctgtgagagatgtaaaaagttgcgaaac
ggcattaaatactgcaaagtgctcaaacttccagagattctgtgcattcatctgaagcgc
ttccggcacgaagtcatgtattcgtttaagataagcagccacgtttccttcccgctggag
ggtcttgacatgcggcctttcctggccaaagagagcccgtctcaggtcaccacttatgat
ctgctgtcagtcatttgccaccacggcacggcaggaagtggacactacatagcttactgt
cagaatgtaataaatggacagtggtatgagtttgatgaccagtatgtcacagaagtccat
gagacggtggtgcagaacgcagaggcctatgtgttgttctataggaagagtagcgacgag
gcggtccgagaaaggcagaaggtggtggctttagccaatatgaaggagcccagtctgctg
cagttttacatctccagagagtggctcaacaagttcaacacctttgcagaaccgggcccg
atcagcaatcagacgtttctttgtcagcaccgaggcattcctccgaataagtaccactac
atagatgatctggtggtgattgtcccccagaatgtgtgggaatatctttacaacagtttt
ggggggggtccagcagtcaaccacctgtacatttgtggcatctgtcaggtagagatcgaa
acgttggccaaacgcaggaaaactgaaatagacactttcatcaagctaaacaaagagttc
caggctgaggaggctcccacagtcattttgtgcatcagtatgcagtggttcagggagtgg
gagagttttgtaaaggggaaagacaacgagccgcctggtcccatcgacaatagtaaaatt
tgtgtgatgaagggaggacacatacagctgaagcaaggcgcagattatggtcagatctca
gaggagacgtggcagtaccttttgggcatttatggaggcggaccagagattgcagtgagg
caaaccgtggctccagctgaccccgacagcctccacggagagaggaagattgaagcagag
acgagagcactttga
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