Oryzias latipes (Japanese medaka): 101163151
Help
Entry
101163151 CDS
T02443
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
ola
Oryzias latipes (Japanese medaka)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
101163151
NCBI-ProteinID:
XP_023820591
LinkDB
All DBs
Position
2:complement(13296094..13312353)
Genome browser
AA seq
742 aa
AA seq
DB search
MVAVLQGYSCQLISVFQLCFLNLVHGGVYYGQKQPPQQPIPQYNDDGFPQPQFLGNEMPG
SPYSKDVPLLPQFGKEFPHLPLQMSKHRPLADGKGQTFLRGSKGPRPPLPGGEGIPLGPA
GIQGPPGLPGPPGPQGPPGLPGQAIPGSPGKPGPPGPQGYRGVGKPGIPGLPGKPGGPGL
PGPKGDLGPSGGEGQIGIPGPPGLPGPTGLPGISKPGSQGLPGLSGVPGEPGQKGMPGLP
GSPGPKGEKGIGLPGFPGLKGPSGPPGPPGQAGLPGIGSPGPNGLPGQPGIPGKPGTPGE
QGPSGSPGERGQPGQPGIQGFGKPGKDGFRGQPGLPGGKGDQGPPGLIGPPGLQGYGKPG
YPGPKGYKGHAGLPGTPGLKGDKGHVGPPGVIGPDGNNGMPGAPGLIGPPGGFGLSGLKG
EDGSMGPRGNPGMKGQIGPPGFPGQLGRSGDSGQPGPRGLQGPIGPKGEAGTRGLPGVHG
APGLPGPRGEVGAAGDKGHQGPQGIPGHAGPGGPIGPPGLPGQKGDIGPPGNPGYPAKGY
PGPPGQIGPQGNTGPNGPPGLPGRPGQPGPPGPPGLPASSPDLVQILPHSGPFNGQTYKP
SKSGSISESSLNMPAFTAKLTNPFPPVGSPIIFDKLLHNGNQDYNPQNGVFTCTIPGIYY
FAYHVHCKGSNVWVALMKNNEPVMYTYDEYKKGLLDQASGSAVLPLRKGDTVHLQLPSDQ
ASGLYAGQYVHSIFSGYLLYLM
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggttgctgtactccagggttattcctgtcaactcatctcagtgttccagctctgcttc
ttaaacctggtgcatggtggagtttattatggacagaaacagccacctcagcagcccata
ccacagtacaatgatgacgggtttccccaaccacagtttctggggaacgagatgccaggc
tcaccttacagtaaagatgttcccttactgcctcagtttggaaaagagttccctcacctg
cctttgcaaatgagtaaacatagacccctggctgatggtaaaggacaaactttcctcaga
gggtctaaaggtccacgtccacccctccctggaggagaaggtataccactgggcccagca
ggaattcagggtccccctggactaccagggccaccaggaccacaggggcctcctgggtta
ccggggcaggcaataccaggttcaccgggaaagccagggcctcctggtccccaaggctac
agaggggttggaaaacccggtataccagggttgccaggaaaacctggaggacctggatta
ccaggaccaaaaggggaccttggtccaagtggtggtgaagggcaaattggaattcctggg
ccacctgggcttcctggacctacaggactaccagggatttcaaagccagggagtcaaggg
ctaccaggactctcaggtgtaccaggtgagcctggtcaaaaagggatgcctgggttacct
ggttctcctggtccaaagggagaaaaaggaattgggttacctggttttccaggtttgaaa
ggacctagtggtcccccaggtccacctggacaagctggccttcctggaattggcagccct
ggccctaatggtctacctgggcaaccggggataccaggaaaacctggtactccaggagaa
caaggcccatcagggtcccctggtgaaagaggtcaacctggacagccaggtattcaaggc
ttcggaaaacctgggaaagatggtttcagagggcaaccagggcttccaggaggaaaaggg
gaccaaggtcctcctggtttgatagggcctccaggtttgcaaggttatggtaaaccagga
tatccaggaccaaagggttataaggggcatgccggtctcccaggaacacctggcctcaaa
ggtgacaaaggtcatgtaggtcctccaggggttattggtcctgatgggaacaatggaatg
cctggagcacctggtctgattgggcctcctgggggttttggtctttcgggactaaaggga
gaggatggctctatgggcccaagaggaaatccggggatgaagggtcaaataggacctcca
ggttttccgggacagcttggtaggtcaggggactctgggcaaccaggaccaagaggtttg
caaggacccattggccctaaaggagaagctggtactaggggtttacccggtgtacatggt
gctccaggattgccaggaccaagaggagaagtgggagcagctggagacaaaggccatcaa
gggccacagggtattccagggcacgcaggtccagggggacctattggaccccctgggctt
ccaggacaaaaaggtgacataggcccacctggtaatccaggttatcctgccaagggatac
ccaggtcctcctggtcaaattggtcctcaaggaaacacaggtcctaacggtcctcctgga
cttccagggcgaccaggacaacctgggccccctggtcctccaggactacctgcttcatct
cctgaccttgtacagatcctccctcacagtggccctttcaatggccaaacttacaaaccc
tccaaaagtggcagtataagtgaaagtagtctgaacatgcctgcatttacagcaaagctc
acaaatccatttccccccgttggttctcccatcatctttgacaagctcctgcacaacggc
aaccaggactacaacccccaaaatggagttttcacctgtaccataccagggatctattat
tttgcttaccatgtccactgcaaaggaagtaacgtttgggtggcactcatgaagaacaat
gagcctgtgatgtacacttacgacgagtacaaaaagggcttgctggatcaggcttcggga
agcgctgtacttccgttacggaaaggagacactgtgcatttacagctcccatcggatcag
gcatctggactatatgcaggtcaatatgtccactccatattttctggatacttattgtac
ctcatgtaa
DBGET
integrated database retrieval system