Oryzias latipes (Japanese medaka): 101163248
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Entry
101163248 CDS
T02443
Symbol
usb1
Name
(RefSeq) U6 snRNA phosphodiesterase isoform X1
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101163248 (usb1)
Spliceosome [BR:
ola03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
101163248 (usb1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HVSL
Motif
Other DBs
NCBI-GeneID:
101163248
NCBI-ProteinID:
XP_023811719
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All DBs
Position
6:23973161..23980516
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AA seq
272 aa
AA seq
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MLVSYSSSSEEEEESQASTKSQICSPKKEKGSFPRPKKAKMEECVSKTRLPLPDCLQTMF
PDEEDRQTEDSSLHGGRIRSFKHERGNWATYVYFAYHPEEEFEELLEELLSASTSHGVAL
TAQEEFHLSLSQTVVLRHHWIQPFMKSLRGGLTHSKRFVCSAGRLRVYCNAERTRTFLGM
EVFTGHAQLLDLVRVIDQTLTEFQLETFYKDPSFHVSLAWCVGDLTEELKEITQELQSLV
DGREDGPFLLNLDCAELRCRTGNKTFRFPLET
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgttggtaagctacagcagcagctcggaggaggaggaggaaagccaagcgtcgactaaa
agtcaaatttgttctcccaaaaaggaaaaaggaagttttcctaggccgaagaaagcaaag
atggaagaatgtgtttccaaaacaagactgccacttcctgactgtctgcagaccatgttt
ccagatgaagaagatcgacaaaccgaggatagctcactccatggcggtcgtatccgctcc
ttcaaacacgagcggggaaactgggccacttatgtttattttgcataccatcctgaggag
gagtttgaggagctgctggaggagctgctctcagcatcaacatctcacggtgtggctttg
acagcgcaggaggagtttcacctcagcctgtctcaaacggtggtgctccgacaccactgg
atccagcccttcatgaagagcctgaggggaggcctgactcactctaagagatttgtctgt
tcagcagggaggctgagggtttactgcaatgctgaaagaacaaggacgttcctcggtatg
gaagtttttactgggcatgctcagttgttggatctggtccgagttattgaccaaacgctg
accgagtttcagctggagactttctataaggatccatctttccacgtgagtctggcctgg
tgcgttggagacctgacagaggagctgaaggagattacccaagagctgcagagtctggta
gacgggcgtgaagatggaccttttcttttaaacctagactgtgccgagctgcgctgcagg
acgggaaacaaaacctttcgcttccctttggaaacgtga
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