Oryzias latipes (Japanese medaka): 101163316
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Entry
101163316 CDS
T02443
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04010
MAPK signaling pathway
ola04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101163316
04020 Calcium signaling pathway
101163316
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101163316
Ion channels [BR:
ola04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
101163316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
101163316
NCBI-ProteinID:
XP_023810378
LinkDB
All DBs
Position
4:complement(31991439..32108622)
Genome browser
AA seq
2489 aa
AA seq
DB search
MLEQGSCSVSSQSLTDDHNGSGSLGAPGGGPKCPAINVDPSMEPMCGSSTPRHHVLHPSP
VDGESWQKHRSGLAAGSSPYSEAPSLLEPLGLSTSYDTLYLPSVSGNAPPAHPNRLGLSL
DVTSPFDAGAEMLGADGDLAVSPNVMKRRRGGLIEQRDIVKAHQAHKIHSTPQARRKEWE
MARFGDEVPGLLSSGDGGSERNRNRDGAAVSTGGISPAFKQTKAQRARTMALYNPIPVRE
NCFTVNRSLFIFGEDNVVRKYAKKITEWPPFEYMILTTIIANCIVLALEQHLPGEDKTPM
SKKLEKTEPYFIGMFCLEAGIKIIALGFVFHKGSYLRNGWNVMDFIVVLSGILAAAGAHL
NISVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGL
EFYSGKLHKTCTPMSGILENETVDSSEYEFPCGVRQCPSGYTCNRPWIGPNDGITQFDNI
LFAVLTVFQCITMEGWTTVLYNTNDALGPTWNWLYFIPLIIIGSFFVLNLVLGVLSGEFA
KERERVENRRAFMKLRRQQQIERELNGYRAWIDKAEEVMLAEENKNPGPSALDAALPAVL
KRATTIKRRGMDVRQGHPGEELYGDISSVGMPTARISIRSGKRGPAAYFRRKERLLRISI
RRVVKTHTFYWTVLGLVALNTLCVAIVHHNQPLWLSNSLYYAEFLFLALFLTEMFLKMYS
LGPRLYFHSSFNCFDCSVIVGSIFEVLWGFFRPGTSFGISVLRALRLLRIFKITKYWASL
RNLVVSLMNSMKSIISLIFLLFLFILVFALLGMQLFGGRFIFEDYTPTNFDTFPAAIMTV
FQILTGEDWNEVMYNGIRSQGGVKSGMWSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQ
ELTKDEEEAEAAFNQKHAMQKAKEVGPLSSFMSSEGSRRRRPYLYRRRAIHRSRPTYSHS
LDEDQGSVRDGRPPLNPTNSFMSRRERRKRMTMSVWEQRTSQLRRHRQMSSREILFTSPG
EEKDALVQGPHEHPLSLHRKAMQHTPSGGVKGSTDAQASPTKNQVTSAGVSVDVALEASL
PDDRPEPATSLLEPEPPDPPAGSGLIPDGNKLGVNHKADHECRSPRLNAERQHRAVKKFR
PPDNTESGGRVEIRGRRTALLCDHEQGTNDQSTGCPTGGRRRNQDQEEESAECERKEGEE
PKEEEHSRRCDQSKGGEPMPQEIQSHSSDPTSQTQEEPPPAPNVSPPANPGDTEVGQGQD
THPLSSSVMIEVPNMQSSLELSTISVNSKDPERCKSEKEEEEDEVKPASTVRPDSMFIFK
PDNPVRRACHYVVNLRYFEMSILLVIAASSIALAAEDPVATTSDWNKVLRYFDYVFTGVF
TFEMIIKMIDQGLILHDGSYFRDLWNILDFIVVVGALVAFALTNVMGNNKGRDIKTIKSL
RVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFY
CTDSSKGLEKDCQGYYIDYGKDKKEMKKREWKRHEFHYDNVVWALLTLFTVSTGEGWPQV
LQHSVDVTEEDRGPSHGNRMEMSIFYVIYFVVFPFFFVNIFVALIIITFQEQGDKMMEEC
SLEKNERACIDFAISAKPLTRYMPQNRHTFQYRLWHFVVSPSFEYTVLTMIALNTIVLMM
KYYSAPPAYDAVLKHLNTAFTVLFSIECVLKILAFGFLNYFRDTWNIFDFITVLGSITEI
VVDLQRIDTFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFI
YAIIGMQVFGNIKLNEETQINQHNNFKTFSGALMLLFRSATGESWQEIMLSCLGGQPCET
DSSIQTAEGTSDHREGCGSDFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILG
PHHLDEFVRIWGEYDRAASGRIHYKEMYKVVRTISPPLGFGKNCPHRVACKRLVLMNMPV
DDDMSVHFTSTLMALIRTALEIKIARGGEDRNQMDLDLQKEIGVIWPHLSQKALDLLVPI
HKASDMTIGKIYAAMMIMDYYKQNKAKKLRQQLEEQKHAPMFQRMDASSLPQEILCNVKS
LSFLGHSAGSALTRGGFVALSPVSPQEMFVQQLPCSRQEKEEEEDADYRSPYHPYRHRLH
YHQHLHTLVPEVVQYNQLMQQTLSKSPQRTASVRASSMPRLAIDPQPGLSADTKSMKRSF
STIGDQCVNGLWQEQHSLERISPDAAYRPRQRSFRGQRVSPKEASSHERGRSKERRHLLS
PDVSREPSHERSRSPSEGRTNNAKKPARVIASVSPVNSASETGTPRNRRQLPQTPSRPRP
HISYSPLVCRASTSPTAPAPTEEQSLPPDGPSDSTETPWRTDKDSRPLSAGQSSPEGGGS
APSHSSPHRYTSEPHLPFHKESSPAERQETLTFETAIATTLGRTHAISSAPQLRHSWQVP
NGHFRKPLAQANPADGSELLSDTDEDDLC
NT seq
7470 nt
NT seq
+upstream
nt +downstream
nt
atgctggaacagggctcctgttcggtcagctctcagtctctgacagatgaccacaatggt
tcggggtcactcggagccccaggaggagggcccaagtgtccagccatcaatgtggacccg
agcatggagccgatgtgtggcagcagcacgccccggcaccatgttctccatccatcccca
gtggacggggaaagctggcagaagcatcgctcaggactggccgcaggttcaagcccgtat
tcggaggctccctccctgttggagccgctcggcctgtccaccagctacgacaccctctac
ctcccatccgtgtccggcaacgctccccccgcacaccccaaccgtctggggctctctctg
gacgtgacctccccgttcgatgctggagctgagatgctgggggcggacggagacctggca
gtcagtcctaacgtgatgaagagacggcgggggggcctgattgagcagagagacatcgtg
aaagctcatcaagctcacaagattcatagcacgccacaagcgcgacgcaaggagtgggaa
atggcccgctttggagacgaggttccaggcttgttgagttctggagatgggggctcggag
cgcaatcggaaccgcgatggagcggccgtgtccacaggtgggatctctccagccttcaag
cagaccaaagcgcagcgtgcgcgcaccatggccttgtacaaccccattccagtccgggag
aactgcttcaccgtcaacagatcgctcttcatcttcggcgaggacaacgtggtcaggaag
tacgccaagaaaatcactgagtggcctccatttgagtacatgatcctcaccaccatcatt
gccaactgcatcgtcttggcgctggagcagcaccttcctggggaggacaaaacccccatg
tccaagaagctggagaaaacggagccttacttcatcgggatgttctgcttagaagcgggg
ataaagatcatcgctctgggctttgtgttccataaaggatcctacctcagaaatggctgg
aacgtcatggacttcattgtggtcctcagtgggatcctggctgcagcaggggcgcacttg
aacatttctgtggacctgaggactctgagggccgtgagggttctgagacccctcaagctg
gtctcggggatccccagtctgcagatagtcctgaagtcgataatgaaggccatggttcct
ctgctgcagatcgggctgctgcttttttttgcaatcctcatgtttgccatcatcggtctg
gagttttacagcggaaaactacacaagacctgcacacctatgtcaggaatactggaaaac
gagactgtcgactcatctgagtacgagttcccgtgcggcgtgcgccagtgtccctccggc
tacacctgcaaccgaccctggatcggccccaacgacggcatcacgcagtttgacaacatc
ctgtttgctgttctcaccgtcttccagtgcatcaccatggagggctggaccactgttctc
tacaacaccaacgatgctttggggccgacctggaactggctctacttcatccctctgatc
ataatcggctccttcttcgtcctcaacctggtgctgggagtcctgtcaggggaatttgcc
aaagaaagagagagagtggaaaatcgcagggcgttcatgaaactgagacgtcagcagcaa
atcgagagagaactcaacggctatcgcgcctggattgacaaagcagaggaggtgatgctt
gcagaggagaacaagaacccgggtccttcagccctggatgctgctctgcctgcagttctg
aagcgagccaccaccatcaaacggaggggcatggatgtgcgtcaggggcatccaggggaa
gaactctacggtgacatttcatctgtgggcatgcccacggccagaataagcatcaggagt
ggaaaacgaggtccggccgcgtattttcggcgtaaagaacgtctgctgcgcatttccatc
cggcgtgttgtaaagacgcacactttctactggacggttctcggccttgtggccctcaac
actctgtgtgtagctattgttcaccacaaccagcctctctggctgtccaactccctctac
tatgcagagtttctgttcctcgctctgttcctgactgagatgttcctaaagatgtacagt
ttgggaccacggctttattttcattcctcctttaactgctttgactgcagcgtgattgtt
ggcagcatctttgaagtgctgtggggcttcttcaggcctggaacctcctttggcatcagt
gttttgcgtgctctccgtctgctgaggatcttcaaaatcacaaagtactgggcatcgctg
agaaacttggttgtctctctgatgaactctatgaagtccatcatctccttgattttcctg
ctcttcctcttcatcctggtctttgcgcttcttggcatgcagcttttcggcggcaggttc
atctttgaagactacactcccacaaactttgacacctttcctgccgctatcatgaccgtc
tttcagatcctgactggagaggactggaacgaggtgatgtataacggcattcgctctcag
ggaggagtgaagtctggcatgtggtcctctgtgtacttcatcgttctgactcttttcgga
aactacactctgctgaatgtcttcttggccattgcagtggacaaccttgctaatgctcaa
gaactcaccaaggatgaagaagaagcagaggctgcgttcaatcagaagcatgccatgcag
aaggccaaggaggtcggacctttgtcgtctttcatgtcttcagagggaagccggaggagg
cggccttacctgtacaggagaagagccatacaccgcagccggcctacctactcccactcc
ctggacgaggaccagggcagtgtcagggacggccgcccgccactcaaccctactaactct
ttcatgtccaggagggagaggagaaagaggatgaccatgtcggtgtgggagcagaggacc
agccagctgcgacgacatcggcagatgtccagcagagagattctgtttaccagtcccggc
gaggagaaggacgctctggtccagggtccgcatgaacacccgctgtctctgcaccgcaag
gctatgcagcatacgccatcagggggggtgaagggctcaactgatgcccaggcgtcccca
accaagaaccaagtcacgagtgctggtgtgtctgtggacgtggcgttggaggcctccctc
cctgatgatagacctgagcccgccacgtctctgctggagccagaacccccggatcctccc
gctggttctggactcatcccagacggcaataagttaggtgtgaaccacaaggcggaccac
gagtgccgaagcccccgactgaacgcagagcggcagcaccgggccgtgaagaagttcaga
cctccagataacaccgaaagcggaggtcgcgttgagatccgcggcaggaggacggctctt
ctctgtgaccatgagcaaggcaccaacgatcagtcaaccggctgtcccaccggcggccga
agacggaatcaagatcaggaggaggagtcagcagagtgtgaaaggaaggagggggaggag
cccaaagaggaagagcacagcagacggtgtgatcaaagcaaaggaggggaaccaatgcca
caagaaatccagagtcacagcagcgacccaacgtctcagacgcaggaagagcctccaccg
gcgccaaatgtgtccccccctgcaaacccaggggacacggaggtggggcagggtcaggac
acacatccactcagctccagcgtgatgatcgaggtgcccaacatgcagtcttctctagag
ctttccacaatctcagtcaacagcaaagatcctgaaaggtgtaaatccgagaaggaggaa
gaggaggacgaggtgaagccggccagcacagtgaggccagacagcatgttcatcttcaaa
cccgacaaccccgtacggcgagcttgtcattatgtggtgaacctgcggtactttgaaatg
tccatcctgctggtcatagctgccagcagcatagcgctcgccgcagaggatcctgtcgcc
acgacgtctgactggaataaggtcctacgttattttgattatgtgttcaccggggtcttc
acgtttgaaatgattataaagatgatcgaccagggtctgattctccatgacggctcgtac
ttcagggacctgtggaacatcctggacttcatcgtcgtggtgggagcgctggtggccttt
gctctcaccaatgtgatgggaaacaataaaggacgagacattaaaaccatcaagtccttg
agggtcctgcgggtcctcagaccgctgaagactatcaagaggcttcccaagctcaaggcg
gtgtttgactgcgtggtgacgtctctgaagaacgtcttcaacatcttaatcgtctacaaa
ctcttcatgttcatctttgctgtcattgccgttcagcttttcaagggaaagttcttctat
tgcactgacagctccaagggactggagaaggactgccagggttactacattgactacgga
aaagacaagaaggagatgaagaagagagagtggaaaagacacgagtttcattacgacaac
gtcgtctgggctctgctgacgctcttcaccgtttccacaggagagggttggcctcaggtc
ctgcagcactctgtggacgtgaccgaagaggacagagggccaagccacggaaacaggatg
gagatgtccatcttctacgtcatctactttgttgtcttccctttcttcttcgtcaatatc
tttgtggctctcatcatcatcaccttccaggaacagggggataaaatgatggaggagtgc
agccttgagaagaatgagagggcgtgcatagactttgcaatcagcgccaagcccctgacc
cggtacatgccgcagaaccggcacacattccagtaccgactgtggcatttcgtggtgtca
ccctcctttgagtacactgtcctgaccatgattgctctcaacacaatcgtgctgatgatg
aagtactactctgccccaccagcgtacgacgccgtgctgaagcacctgaacacagctttc
accgtgctcttctccatcgagtgcgtcctcaagattctggccttcggctttctgaactac
tttcgagacacctggaacatttttgacttcatcaccgtcttgggcagcatcactgagatt
gtggtcgacttgcagcgcatcgatacgttcaacatgagtttcttgaagctgttccgagct
gctcgtctgatcaaactgctgaggcagggctacaccatccgaatcctgctgtggaccttc
gttcagtccttcaaggccttgccatacgtctgtctgctcattgccatgctcttcttcatc
tacgccatcattgggatgcaggtgtttggaaacatcaaactgaatgaagagacccagatc
aaccaacacaacaacttcaaaactttctccggtgctctgatgctgctgttcaggagtgcc
acaggggaatcctggcaggagatcatgttgtcgtgtctggggggacagccgtgtgaaacc
gactcctctattcagacggcagaaggaacgagcgaccacagggagggctgtggctccgac
tttgcctatttctactttgtgtccttcatctttttcagttctttcctgatgctgaacttg
tttgtggctgtgattatggataactttgagtatcttacaagagactcgtccatccttggt
ccacaccatttggacgagtttgtccggatctggggggagtatgatcgagctgccagtgga
aggatccactataaggagatgtacaaagttgttcgcactatctcacctcctctgggcttt
ggaaagaactgcccccacagggtggcatgcaagagacttgttctgatgaacatgcctgtg
gatgacgacatgagcgtccacttcacatccaccctcatggcgctgatccgcaccgccctc
gagatcaagattgccagaggaggagaagatagaaaccagatggatctggatctgcagaag
gagatcggcgttatttggcctcatctgtcccagaaggcgttggacctgctggtcccgatt
cacaaagcaagtgacatgaccatagggaagatctatgctgccatgatgatcatggattac
tacaaacaaaacaaagccaagaagttgcgacagcaactagaggaacagaaacacgctccc
atgttccagcgaatggatgcatcttctcttcctcaagaaatcctatgcaatgtgaagtct
ctgtcgttcctcgggcacagcgctggatctgctctcaccagaggagggtttgtggcgctc
agcccagtttccccccaggaaatgtttgtgcagcagttgccctgctcccggcaggagaag
gaggaagaagaggatgcggactaccgttccccctaccacccctaccgccaccgtcttcac
taccatcaacatttgcacacgctggtgccagaggtagtgcagtacaaccaactgatgcag
cagacactcagtaaatcacctcagcgcactgcatcagttagagcatcttccatgccgaga
ctggctattgacccgcagcccggattgtcagcagacaccaagtccatgaaacgttccttc
tccaccatcggagaccagtgtgtgaacggcctctggcaggagcagcactctctggaaaga
ataagtccagacgccgcctacagaccccggcagaggagctttagaggtcaaagagtcagt
cccaaggaagccagcagtcatgagagggggagatcgaaggaacggcgccacctgctttct
cctgacgtgtcccgggagccttcacacgagagaagccgctcgccaagcgaaggacggacg
aacaacgccaagaaaccggcaagggtgatcgcgtcggtcagtcctgtcaactcggcctca
gaaactggtactccacgtaaccgccgccagcttcctcagacaccttcccgcccgcggcct
cacatctcctactcccctcttgtctgccgagcctccacctcccccaccgctccagccccc
acagaggaacaaagcctccctcccgatgggcccagcgactccacagagaccccctggagg
actgacaaggacagcagacccctgtcggcgggtcagagctcccctgaaggcggcggctca
gcacccagccactcctctccacaccgctacacctcagagccccacctcccgtttcacaag
gagtccagcccagctgaaagacaggagaccctcacctttgagaccgccatcgccaccacc
ctgggtcggacacacgccataagctccgcccctcagctcagacactcatggcaggttccg
aacgggcatttccgtaagcccttggctcaggccaacccggctgacggcagtgagttgctc
agtgacacagatgaagacgacctctgctaa
DBGET
integrated database retrieval system
