Oryzias latipes (Japanese medaka): 101163328
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Entry
101163328 CDS
T02443
Symbol
rai1
Name
(RefSeq) retinoic acid-induced protein 1 isoform X3
KO
K19749
retinoic acid-induced protein 1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101163328 (rai1)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
101163328 (rai1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
101163328
NCBI-ProteinID:
XP_004071742
UniProt:
A0A3B3I089
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All DBs
Position
8:complement(12414835..12427173)
Genome browser
AA seq
2204 aa
AA seq
DB search
MQSFREHSSGYHSNQPCYQQEPHELSRLETYRQHPHHPHPQHPHPGPGPHPGPGPGQSRP
GYETHSLANTASMPPAGGGGMGGGSKDCYSQQTYAGYPGTAGGTGSGNGGSAASQTKKSF
RGNKVPPTNPGQHLQGSGGYNNHMGPSSYSAQYLSEGHPQQKWEDSPQLAQFEQEMVGRL
EAGSTPTPVSSQYMDLNIMGHSQTQCHQPSTSIYTSPHSQPHPPNLAPSPLMYPQSHLHY
PQPSPSPSPYMEKCNPMPHCYKGYNIPPNSQYVRQMSSHSNLKQGNYRSTQNNYSYQQAL
PRVYEQQPSLQSLTNTSEPHPKYQQYNQPQQNYCLSDLPVRSPEQYYQTCSPSSNHSPAR
SVGRSPSYSSTPSPLMTNPDSFQYSQPPMTPGAASTSSSSSTGMQDQANANNMLLPPRSH
PSPNVSLTAPHSFTTTPQVPTMKERFSEKLLSNPSLWSLNALTSQVENISNNVQQLLLSE
ALVANKKASKRSSGGSTSSAGSGVSSKKGEEYKSPSYADSSGGVGGGPMQDRYSTPQHQS
IPMEIHEGGYSSSSEEPLDRGYYYFGQSRSPAQAHNNTQISLDTASSCSLASPDDMSTRS
GDSGLHNLTPDPTRCQPGQVGDGMSTPAKSLSDERSPTSVMIPSPMKQEQDSPSNVQSII
EPGKENFEESAWMDKSVDKDEVTIEKKHDWERLSDSAKSMEKPDKWSDEEKCQAAYSKIN
TGMTEKHYCYENTVYQEVQGKYDPDAADSVEESPADLSDSSNKDPFGREIKTEAFKSESP
TASESSVKTFSFISRGDLEQDQYSIEKDDSSENASPTPQAEVLEDCDSDKRESRDQENEE
REEGMGKEKVVENEEDMQKKRKSSASPHFSEEVRVDQGEGKKLSQSSTEEHMNNRVSQEN
PSGDLFSRTESLSSEFNTDDEFAGAFVRANLASANAGMDPSARESAIGDTVPQSQSAMPV
FSALTEKAAPPVQGRDHIDHSDAKVLEPDSPQLPGKSILPSAPSWANTPPSPKKGDEDLE
SGISCTSAMTPLAKPEPVAPSSQPRSFGRKHARGRRRITHSGVRIRQQLRLEREEEKDEE
RATPASQMLDVTPSKTELYSDHTDLPHQDSIVSQTSKIVTDGFRSRMCTRSFNATDVQTK
TELNLKRKPGPKAGSKPGPKPGIKPGMKPGPKPGQKSISKPGPKPGPKPLPNETEIPLKI
DSVVKRKPGPKPGSKLRSKPVSKSVTKTVPKPGPKLTPKPGLKLEDALTPIDIPSIKGVV
GRPKGSITKAKVVQQEVTVEAVAGQQSRGRKSLKTSIPQLNQDTKPAQADSQVQPEAKAV
ENESKNMVLRSRKPPKDKLENDKKKVTQGDTHTLLKIKVRDVSPVIEDNIDVELTPTTGS
DMVKTPDASDTPAPPSPSDFLLQSQKKTSPPLNVNQRKSTPETPIKKKRGPKPKPKIAPP
QTETQEEVDPTLTEKNVQGPRRKRGPPKKTSTVTLITKDISVTDVVGDVAANPHQCPTKT
KVLPPRKGRGQKYEAMVQKITSPSSKKHMPTPQPDSILMDDAANKVLSENVLKESESPVQ
TNNTEMLEPGKEGSKQQKASVIKEEMTQERENQEMTEEKLTEGLRHRQKDEVSNKTEKKE
EHFKVDTQQDITEYNALGSTDTHLDVGGLGELTHQASESVITAALKSTRAKRKRWAMVES
ADVSVVALEAGSLIVTTPRLAKQRAIKNNHEMHLKQRRKKRKDQESTEKSDTAEETNTEG
IKQEESADEKVTPMETTTPLSVSQDEILENPQFIKTEIVQKPRRGRKPSAHPTKRKRSKT
PIKQLPVKLLKVHKKPGPKPGMKDAIEVIEAVVRAAGCEQAKKEEREIEERTRLERENPD
KEDTGIMGPVVTATEKLTEIISVKRIRRKPIYQNSKLSFCPYVRINNSRDFSSWCAIVNK
PDDAVVFQRRRKKGILRMRNPFTVAKVTPHTAAMIQGPMVNTDISGRSLTCCLCGKPANY
KDLGDLCGPYYAEDSVPRKVLTITHTESFREESNTTCGNDCSTAEKPGASENDAEVNVDK
EGNAEASSQEPSSSRHHHWRYRRAERPERSCREGAPRRLTLRERFRKMKQLQNVSKGASG
DQEGTNSIFQRLRMEAEASEHWAHENCAIWTKGVIMVAGRLYGLKEAANSSAQTNCYKCQ
TEGASLSCCWRGCSHKYHYVCAKEIGCTFHEDDFSIKCPKHEDL
NT seq
6615 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgtgagcacagcagcggttaccacagtaaccagccttgctaccagcag
gagccccatgaattatcccgcctggagacctaccggcaacaccctcatcatccccaccct
cagcatccacatccaggccctggaccacatccaggcccaggcccggggcagagcagaccg
ggctatgaaacacactccttggcaaacactgctagcatgcctccggccggaggaggaggg
atgggaggaggatccaaagactgttacagccagcaaacctatgctggatacccagggact
gctggagggactggcagtggaaatgggggctcagcagcctcacagacaaagaagtccttc
agaggaaacaaagtgcccccaacaaaccctggtcagcatctgcagggttctggagggtac
aataaccacatgggcccaagtagttactcggcccagtatttaagtgaggggcatccccaa
caaaagtgggaggactcaccccaacttgcacagtttgaacaggagatggtgggacgtttg
gaagctggcagtacccccacgccggtttcctctcagtacatggacctgaacattatgggg
cattctcagacccagtgccatcagccctctacctctatttataccagcccccacagtcag
cctcaccctcctaaccttgccccttcaccccttatgtatccccagagccacctgcactac
ccacagccttccccttctccatctccatacatggaaaagtgcaatccaatgccccactgc
tataaaggttacaacatacctccgaattcccagtacgtaagacaaatgagcagccacagc
aatctaaagcaaggaaactacaggtcgacccagaataattacagttatcagcaggccctc
cccagagtttatgagcagcagccctctttacagtccttgaccaacacctcagagccccac
ccgaagtaccaacagtacaaccaaccccaacaaaactactgtttgtcagacctgccagtc
agatctccagagcagtattatcagacttgtagcccctcctccaatcactcccctgcacgt
tctgtcgggcgttcaccctcgtacagttccaccccttcaccactaatgacaaatccagac
tcattccagtacagccagccgcccatgacacctggggcagcctcaacctcttcgtcctcc
tcaactggcatgcaggatcaggccaatgcaaacaacatgctgctgcccccgcggtcacac
ccatcacccaacgtgtcgctcacagccccccacagcttcactacaacaccacaagttccc
accatgaaagaacgcttttcagagaaactgttatctaaccccagcttgtggagcctgaat
gccctcacctctcaggtggagaacatctcaaataatgtccagcagctgctgctttctgag
gcattggttgcaaacaagaaagccagtaaacgcagcagtggtgggagtaccagcagtgct
ggaagtggagtgtcctctaaaaagggtgaagagtacaaaagtccttcttatgcagatagc
agtggtggtgtgggtgggggacccatgcaggaccgctactccaccccccaacaccagtca
atacccatggaaatccatgagggtggttactccagtagtagtgaagaacctctagataga
ggctactattactttggccagagcagaagtccggctcaggcccacaacaacactcaaatc
agtcttgacacagcctcgtcttgctcgcttgcttctcctgatgacatgtcaaccaggtct
ggtgactcaggtctccacaacctaactcctgaccctaccaggtgtcagccaggacaggta
ggtgacggcatgagtactcctgcaaaaagcttgagtgacgagcggtctcccacaagtgtc
atgattcccagccccatgaaacaagaacaagattccccatcaaatgtgcagagcatcata
gagcctggcaaagagaattttgaagagtcagcatggatggataaatcggttgacaaagac
gaggtgacaatagagaaaaaacatgactgggagagactttcagattcagccaagtcaatg
gagaagccagataagtggtcagatgaagaaaaatgtcaagcagcttacagcaaaataaat
acaggtatgacagaaaaacactattgttatgagaacacagtgtaccaagaggtccagggc
aaatatgaccctgatgcagcagattctgttgaagagtcaccagcagacctctctgactca
agcaacaaagatccatttggtcgggagattaagacagaggcattcaaatcagaatctcca
acagcttctgaaagctcagtgaaaacattttcttttatttcaaggggtgaccttgagcag
gatcaatattccattgaaaaggatgatagctcagagaacgccagcccaacaccccaagct
gaagtcttggaagactgtgactcggataaaagagagagcagagatcaagagaatgaagaa
agagaagagggtatgggaaaggagaaggtcgttgaaaatgaggaagacatgcagaaaaaa
cgtaaaagctcagcttcccctcatttctctgaagaggtgagagtagaccaaggggagggg
aagaaactcagccagtcatcgactgaagagcacatgaataatagagttagccaagagaat
ccttctggagatcttttcagtagaacagagagtttgagttctgagttcaatacagatgat
gaatttgcaggggcatttgtcagagctaatttagcatcagctaatgcagggatggatcct
tctgcgagagagtcagccattggtgacactgtccctcagtctcaatctgccatgcctgta
ttttctgctctcaccgaaaaggcagcacctccggtgcagggaagggatcatattgatcac
agtgatgctaaagtgctggagccagactctcctcaactgccagggaagtcaatactcccg
tcagctccttcctgggcaaacacgccaccttcccccaaaaaaggtgatgaggatttagaa
tcgggcatcagctgcactagtgccatgactccattggctaaaccagagccggtagctcca
tcttcccaaccaagatcatttggacgtaagcacgccagaggtcgacggagaataactcat
tcaggtgtgaggatacggcaacagttacgtttagagagggaggaggaaaaggatgaggaa
agagccacacctgcctcacaaatgttggacgtgactcccagcaagactgagctatactca
gatcacactgatctaccacatcaggactccattgtaagtcagacttccaaaatagtgaca
gatggttttcgttcaagaatgtgcacccgctcgtttaatgcaacagatgtgcaaaccaaa
actgaactcaacttgaagagaaagcccggcccaaaggcgggttcaaaacctggaccaaag
ccaggaataaaacctgggatgaagccagggcctaagcctggacaaaagtccatttcaaaa
ccaggacctaaacctggaccaaaacctttaccaaatgaaacagaaataccgctaaaaatt
gactctgttgttaaacgtaaaccaggacccaaaccaggttcaaagctcagatcaaagcct
gtttcaaaatctgttacaaaaacagtcccaaaacctggacctaaactgactcctaagcct
ggactcaagcttgaggatgctttgacaccaatagatattccctctattaaaggtgtagta
ggtcggcccaaaggctccataactaaagcaaaagtagtgcaacaggaagtcacagttgaa
gctgttgcagggcaacaaagtagaggtagaaaaagccttaaaacctcaataccccaactg
aaccaggatactaaaccagcgcaagcagacagccaagtacaacctgaggcaaaggcagta
gaaaatgagagtaagaacatggtcttgagatccagaaaacccccaaaagacaaactggaa
aatgacaaaaagaaagtcacacaaggagacacccatacattattaaaaattaaagtcagg
gatgtttctccagtaatagaagacaatattgatgtagaactaactccaactactggttct
gacatggttaaaacaccagatgcttctgacacacctgcaccaccttcaccatcagatttc
ctcctgcaatctcagaaaaagacctccccaccactaaatgtaaatcagcgtaaatctacc
ccagagacacccatcaagaaaaagaggggtccaaagcccaaaccaaaaattgcaccacct
caaacagaaacacaggaagaggttgacccaacactcacagaaaaaaatgtgcaaggtccc
agaagaaagcgcggcccacccaagaagacctccacagtcaccctcataaccaaagacatt
agtgtcactgacgtcgtgggtgatgtggcagcaaatcctcatcagtgccctaccaaaaca
aaagttctcccaccacgtaaaggcaggggtcaaaaatatgaggctatggtacagaagatt
acttcgccaagctccaagaaacacatgccaacacctcagccagacagcattctaatggat
gatgccgcaaacaaagtgttgtctgagaatgttctaaaggaaagtgaaagtccagttcag
acaaacaatactgagatgttagaacctgggaaagaggggtcaaagcagcagaaagcatca
gtcattaaggaagagatgacacaggaaagagaaaatcaggaaatgactgaggagaagtta
acagaagggttaagacacagacagaaggatgaggtatcaaataagacagagaagaaagag
gaacactttaaagtagacacacagcaggatatcacagagtataatgctttgggttcaaca
gacacccacttagatgtaggaggtttaggtgagttgacacaccaggcatcggaaagtgta
atcactgctgcccttaaatccactagagccaaaaggaagagatgggcaatggtagagagt
gcagatgtttcagttgtagccttagaagccggaagcctaatagtcacaacccccaggtta
gcaaaacagagggccatcaaaaacaaccacgaaatgcaccttaaacaaagaaggaagaag
agaaaagatcaggagtccacagagaaaagtgatacagctgaagaaaccaacactgaaggg
ataaaacaagaagaatcagcagatgagaaagtgacccctatggaaacaacaacaccgctg
tcagttagccaggatgagattctagaaaacccccagtttatcaaaaccgaaatcgttcaa
aaacctcgaagaggacgaaaaccatcagcacacccgactaaaagaaaaagaagcaaaacc
ccaataaaacagttacctgtcaagctgctgaaagttcataaaaagccaggcccaaaacct
ggcatgaaggatgctattgaggtaattgaggcagttgttagagctgctggttgcgaacag
gctaaaaaagaagagagagaaatagaagaaaggacaagattggaaagggagaatccagac
aaggaggacacgggcatcatgggtcctgtggtgactgcaacggagaaactgacagagatc
atttctgtgaaaagaatcaggcgcaaaccgatctatcaaaactcaaagctgtctttttgt
ccctacgtacgaatcaacaactccagggacttttcatcctggtgtgccatagtcaacaag
cctgacgacgcggtggtatttcagaggcggagaaaaaagggcattcttagaatgaggaat
cctttcactgtggctaaggtgacgccacacactgccgccatgatacaggggcctatggtc
aatacagatatatctggtaggagtcttacatgttgtctttgtggaaagccagcaaattac
aaagacctcggggatttgtgtggaccatactacgcagaagatagtgttccgcgtaaagtt
ttgaccatcacacacacagaatccttcagagaagagtcaaacacaacttgtggcaatgac
tgtagcactgctgaaaaaccaggtgcttcggagaacgacgccgaggtcaacgtggacaaa
gaaggaaacgcagaagcatcatctcaagagcccagcagcagcaggcatcatcactggcgc
tatcgaagagcagagagacctgaaaggtcatgtcgggaaggcgctccacgaagattaacg
cttcgagagaggttcaggaaaatgaagcagcttcagaatgtcagcaaaggggcttcaggg
gaccaagagggaaccaacagcatcttccaacggctgcgaatggaagcagaggccagtgag
cactgggctcatgaaaactgtgccatttggaccaagggggtaattatggtagctgggaga
ctgtatggactgaaggaggctgccaacagctcagcacaaacgaactgctacaagtgccag
actgagggggcatccctcagctgctgttggagaggctgctctcataaataccactatgtc
tgcgccaaagagataggctgtacattccatgaagatgatttctccatcaaatgtcctaaa
catgaggacctgtaa
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integrated database retrieval system
