Oryzias latipes (Japanese medaka): 101163395
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Entry
101163395 CDS
T02443
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03030
DNA replication
ola03410
Base excision repair
ola03420
Nucleotide excision repair
ola03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101163395 (rfc2)
03410 Base excision repair
101163395 (rfc2)
03420 Nucleotide excision repair
101163395 (rfc2)
03430 Mismatch repair
101163395 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ola03032
]
101163395 (rfc2)
03036 Chromosome and associated proteins [BR:
ola03036
]
101163395 (rfc2)
03400 DNA repair and recombination proteins [BR:
ola03400
]
101163395 (rfc2)
DNA replication proteins [BR:
ola03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101163395 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
101163395 (rfc2)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
101163395 (rfc2)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101163395 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
101163395 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
RCF1-5-like_lid
nSTAND_NTPase5
AAA_22
AAA_14
AAA_16
Viral_helicase1
Mg_chelatase
AAA_11
Rad17
RuvB_N
DEAD
AAA_19
MipZ
nSTAND3
AAA_5
AAA_assoc_2
AAA_18
AAA_24
ABC_tran
AAA_30
AAA_23
AAA_28
RNA_helicase
AAA_25
MeaB
NTPase_1
MCM
SLFN-g3_helicase
AAA_2
DNAX_ATPase_lid
FtsK_SpoIIIE
IstB_IS21
AMP-binding_C_3
bpMoxR
ATPase_2
DUF815
Motif
Other DBs
NCBI-GeneID:
101163395
NCBI-ProteinID:
XP_004086351
UniProt:
H2MX50
LinkDB
All DBs
Position
7:complement(28597634..28604160)
Genome browser
AA seq
355 aa
AA seq
DB search
MDAEMSQAENGQKAGESGQKSDTGESSSKSSGYSYDLPWVEKYRPLKLNEIVGNEETVSR
LEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGSAMKDAVLELNASNDRGIDVVRNK
IKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKIIE
PIQSRCAVLRYAKLTDGQILSRLQEVIEKERLSVSDDGLEAVIFTSQGDMRQALNNLQST
HSGFGYINSENVFKVCDEPHPLLVKSMLGHCVDGNIDEAYKVVEHLWGLGYSPEDIIGNI
FRVCKTYQMAEYLKLEFIKEIGYTNMRVAEGVNSLLQMAGLLGRLCSKTAPPAAS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagaaatgtcgcaggcagaaaatgggcagaaagcaggagaaagcggacaaaag
tcggacaccggcgagtcttcgtctaagagctcaggatattcgtacgatctgccctgggtg
gagaagtaccggccgctgaagctgaacgagatagttggaaacgaggagaccgtcagccga
ctggaggtgttcgccagggaggggaatgtcccgaacattatcatagcgggacctccaggg
accggaaagaccaccagcatcctgtgtttggcccgagcactgctggggtctgccatgaaa
gatgccgtgctggagcttaatgcgtcaaatgacagaggcattgatgtggtgaggaacaaa
attaagatgtttgctcagcagaaggtcacgctgcccaaaggtcgacacaaaatcatcatc
ctggatgaagctgacagcatgacggatggagctcagcaggccttgaggaggatcatggag
atctactccaagaccacccgctttgcgctcgcctgcaacgcctcagataagatcatcgag
cccatccagtctcgctgcgcggtgctgcgctacgccaagctgaccgacgggcagatcctg
tcccggctgcaggaggtgatcgaaaaagagcgcctctcggtgtcggacgacggcctggag
gccgtcatcttcacctcccagggggacatgaggcaggcgctgaacaacctgcagtccacc
cactccggcttcggctacatcaacagcgagaatgtcttcaaagtgtgcgacgagcctcac
cctctgctggtgaaaagcatgctgggacactgtgtggacgggaacattgacgaggcgtac
aaggtggtggagcatttgtgggggctgggctactccccagaggacatcataggcaacatc
ttcagggtctgcaagacctaccagatggcagagtacctgaagctggagttcatcaaggag
attggatacaccaatatgcgggtggctgaaggcgtcaactccttgctgcaaatggccggt
ctgctgggacgactctgcagtaagacggcgccccctgctgccagctga
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integrated database retrieval system