Oryzias latipes (Japanese medaka): 101163463
Help
Entry
101163463 CDS
T02443
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101163463
Enzymes [BR:
ola01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101163463
Spliceosome [BR:
ola03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101163463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
101163463
NCBI-ProteinID:
XP_020558720
UniProt:
H2L3M0
LinkDB
All DBs
Position
1:complement(2617741..2623948)
Genome browser
AA seq
427 aa
AA seq
DB search
MAETDVDNELLDYEEDEEPQGLPESGTPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPSVKVSVFFGGMAIKNNEDTLKKNCPHIVVGTPGRTLALIR
NKTLSVKNIKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVNRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEVDAKTLNEVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaccgacgttgacaacgaacttctggactatgaggaggacgaggagccccag
ggactcccagagagcggcactcctgcaggcaagaaggaggtgaagggctcctatgtgtcc
atccacagctccggcttcagagacttcctccttaaaccagagcttctccgcgccattgtt
gactgtggttttgagcacccctcagaagttcaacatgagtgcattcctcaagccatcctg
ggcatggacatcctgtgtcaggccaagtctggcatggggaagacggctgtgtttgttctg
gccaccctgcagcagatcgagcctgtggatggacaggtgtctgtcctggtgatgtgccac
actcgagagctggccttccagatcagcaaggagtacgagcgcttctccaagtacatgccc
agcgtgaaggtctccgtcttctttggggggatggccatcaagaacaacgaagacaccctg
aagaagaactgcccccacatcgtcgtgggaactccggggcgcaccctggccctcattcgg
aacaagaccctcagcgtgaagaacatcaagcactttgtgctcgacgagtgcgataagatg
ttggaacagttggacatgaggcgcgacgtgcaggaaatcttcaggctgacgccccacgag
aagcaggtcatgatgttcagcgccaccctcagcaaggagatccgccccgtctgccgcaag
ttcatgcaggacccgatggaagtgttcgtggacgatgagaccaagctgacgctccacggc
ttacagcagtactactgcaagctgaaggacagcgagaagaacaggaagctgttcgacctc
ctggacgtgctggagttcaaccaggtggtgatctttgtgaagtcggtgaaccgctgcgtt
gctctgtcgcagctgctggtcgagcagaacttccccgctatcgcgatccacagaggcatg
gcacaggaggagaggttatcccggtaccagcagttcaaagacttccagcggcggatcctg
gtggccaccaacctgtttggtcgaggcatggacatcgagcgcgtcaacatcgtcttcaac
tacgacatgccggaggattcggacacgtaccttcacagggtggcgcgcgccggcaggttc
ggaaccaaagggctggccatcacctttgtgtcggatgaggtcgacgccaagactctgaac
gaagtccaagaccgctttgaggtcaacgtagccgagctgcccgacgagatcgacatctcc
tcgtacattgaacagtccagatga
DBGET
integrated database retrieval system
