Oryzias latipes (Japanese medaka): 101163521
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Entry
101163521 CDS
T02443
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03272
Virion - Hepatitis viruses
ola04382
Cornified envelope formation
ola04514
Cell adhesion molecule (CAM) interaction
ola04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
101163521
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
101163521
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101163521
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
101163521
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ola01009
]
101163521
Protein phosphatases and associated proteins [BR:
ola01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101163521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
AAA_23
Motif
Other DBs
NCBI-GeneID:
101163521
NCBI-ProteinID:
XP_023820671
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All DBs
Position
17:complement(14183575..14204831)
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AA seq
542 aa
AA seq
DB search
MYEPRYYDSPPLYSPPYSATSHSFYPPRSVHSLQSQHAPYRYDLPPNSYCAEGRPQHFYH
YFSPPGFVKIFQGATALMCFIIFACVASTLVWDTNGFGYGGFGVGSTSGSVTGVGSGYYG
GSYGYGGSYMTPLSAKSAMISVAAINFLVSLGFLVGSFSRSRIMRGCRFYLIIFICDIIL
AVLQGIIDIIFVIGVNPMSQSSQSMLYNPMLMMCQNIQGSPSLSGSVGAGFPGGFPMYNQ
FLHHYCYMDPEEAVAFALGLMVVLALSFSAYYAYKTRSKIWRHGKCNIVWDEPGVRPADG
QNVWMNHVGEVHSTQRAPTVVISERAASGLKAEDSGFSSGKGTLGVHNEECSKSNSVFAD
IKTSSGAESQHHSSKAAIRSSSSEEEDNFRKPPPYHGNRKKRKDGESMFAPQVMVESEYE
TGETDNELDRDHTHDLYRLYPAITSDEQRRKYKEEFDSDLAHYKRLCSTLDDIGDRMHKL
SRELDLLDEESLKYQSVADEYNRLKELKKSADYQAKKKQSKDLQKKLSHIKSLVKLYDQG
FC
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagcctcggtattacgacagcccccctttgtacagcccgccttacagcgccacg
tcccacagtttctatcctccaagaagtgtccattctctccagagtcagcacgccccttac
cgctatgatctccctcctaactcgtactgcgcagaggggaggcctcaacacttctaccac
tacttctcgcctcctggttttgtcaaaattttccaaggagccacggcgctcatgtgtttc
ataatcttcgcctgtgtggcttcgaccttggtgtgggacacaaatgggtttgggtatggg
ggcttcggggttgggagcacatcaggctctgttacaggagtgggttcaggttattatgga
ggcagctacggctacggcggatcctacatgacaccactgtcggctaagtcggccatgatc
tcggtggctgccatcaacttcctggtttcattggggttcctggtggggagtttctcgcga
tcccggatcatgcgaggatgcaggttttacctcatcatctttatttgtgatatcatcctg
gctgtccttcagggcatcattgatatcatatttgtgatcggcgtgaacccgatgtcccag
agctcccagagcatgctgtacaaccccatgctgatgatgtgtcagaacatccagggcagc
cccagcctcagcgggagcgtgggggccggttttccaggagggttccccatgtacaatcaa
tttctgcaccactactgctatatggaccctgaagaggcggtggcatttgcgttaggtctg
atggtggttttggccttgtccttctccgcctactacgcctacaagacccgaagcaagatt
tggcgccatggaaaatgcaacattgtctgggacgagccgggagtcaggccagctgatggt
caaaacgtctggatgaaccacgttggtgaggtgcacagcacccagcgggcacccactgta
gttatatcagagagagcagcatctggtctgaaggcagaggacagtgggttttcctctgga
aaaggaacccttggtgtccacaatgaggaatgttctaaaagcaacagtgtctttgcagac
atcaaaacgagctctggtgcggaaagtcagcatcacagcagcaaggctgcgattcgttcc
agcagctccgaggaggaggacaacttcaggaagcctcctccgtatcatggaaacagaaaa
aagaggaaggatggagaatccatgtttgcaccccaagttatggtcgagtccgagtacgaa
acaggagagactgacaatgagctcgaccgagaccacactcatgacctttaccggctgtac
ccagcaataacttcagatgagcagcgccgcaagtacaaggaggagtttgactcagactta
gcccactacaagagactctgctccacactggatgacatcggggaccgcatgcacaagctg
agtcgagagctggaccttttggatgaggaatcactaaagtatcagagtgtagcagatgag
tataatcgactaaaggaattaaaaaagtctgcagattatcaagcaaagaagaaacaaagc
aaagaccttcagaagaagctttcccacatcaagagtctggtgaaactgtatgaccaggga
ttttgctag
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