Oryzias latipes (Japanese medaka): 101163568
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Entry
101163568 CDS
T02443
Symbol
taf3
Name
(RefSeq) transcription initiation factor TFIID subunit 3
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101163568 (taf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101163568 (taf3)
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101163568 (taf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
PHD
PHD_2
Motif
Other DBs
NCBI-GeneID:
101163568
NCBI-ProteinID:
XP_004069581
LinkDB
All DBs
Position
6:13577840..13588978
Genome browser
AA seq
933 aa
AA seq
DB search
MCESYARSLLRVSVAQICQALGWDAVQLTACDLLSDVLQRYIQQLARVCHRYSELYGRTD
PMLDDLSQAFRLMGVNLSELEDYVHNLEPVAFAHQTPLFPVCKNNMLQFPQSAARDADER
KDYIPDYMPPLVSLQEEEEEEEVPPDMGTSAEAMQVPLEEDDEEIDEEETVNDENYPLKR
HLDSPDAALGIMPTSKKPRLYPGLSPEWGAEPREPLTSLNPQRVPPGVLPSHDSLDPLSP
EMPSGALQPFRPQPIIPKQFDQKSLGTPGKKPKVSSPGRQRTKSPKGLLPVPLIGSPIHS
PKPSKEKKKSPAKTKSPKSPKSPKMSSIKVSQLQSKAEILLKPPLPALNEKIGKENIQMR
HIVEDREPPEGLFKNLEPDNTAIDDSIAAVIARACAEREPDPFAFSSGSDSDSNGFSSPK
RLTIMEPATPKAPIGTANLLKDTSTPLHLQVHPGLGNWTLEDSINEVVRRANQGGPSAPP
QSQAEYASSGSASPPTPEPLLKVFEEKNKIGPPPDLKKKLKKELKAKMKKKEKPKDRDRE
REKGKLKDRSKEKNKDRNKEFSKDMKMPWKELGGSNEDHFGQLDFSLSDIPIKIKSKDGD
VPKKEKEKHKDKKKDKEKSKKDKDKREKGKDRNKEDKQKQPTVPPFVLSEVPSLFSPSTC
LRMPPMLPPFPPLLQEEGKSKEKERKKEKKEKKKKKDKEKDKEREKAKEREREKEEKRKE
KEKEKDKREKEKEKEKIRLEKVKADAPAVLPSPVIPRLTLRVGAGQDKIVISKVVPSSET
RTPTPKAPAAKSGPGNRPRTPPPAPILPPALPILPAAAPPPLATPPTASSLLCMPSMLPP
SASVKTPVRSVVTETVSTYVIRDEWGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVG
IVAEPPEDQPWFCVKCSCKKKDKKHKKKKHKPH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgagagctatgcccgctcgctgctgcgtgtttcggtggcgcagatctgccaagct
ctgggctgggatgcagtccagctcactgcgtgcgatctgctgtctgatgtgctgcagagg
tacatccagcagctggcgagggtctgccaccgatactccgaactgtatggaagaacagat
ccgatgctggatgatctcagccaggccttccgactcatgggggtaaacctgagcgagctg
gaggactatgtccacaatctggagcccgtggcgtttgcccatcagacgccgctcttcccc
gtatgcaaaaacaacatgttgcagtttcctcagtctgcagccagagacgcagacgaaagg
aaggattacatccccgattacatgccgcccctggtttccctgcaggaagaagaggaggag
gaggaggtccctccagacatgggcacctcagccgaagccatgcaggtgccgctggaggag
gatgatgaggaaatagatgaagaagagactgtcaatgatgaaaattatcctctgaagagg
catttggacagtcccgatgcagctttgggaatcatgcccacctccaagaaaccgcgcttg
taccctggtctcagcccggaatggggggccgagccacgggagcctctcacatcgctcaac
ccgcaacgcgtcccgccaggcgttctgccttcgcacgacagcctcgaccccctgtcgcct
gaaatgccatctggtgccctgcagcccttcagacctcagccgatcataccaaaacaattt
gatcaaaagagcctcggcacgcccgggaagaagcccaaggtttcgtcccctggcaggcaa
cggactaagtcccccaaaggtctcctccccgttccattaattggtagtcccatccactct
ccaaaaccgtcaaaggaaaagaagaagtctcctgctaagacaaaaagccctaaaagtcct
aaaagcccaaagatgagttccatcaaagtgtctcagcttcagagcaaagcagagatcctg
ctgaagcccccgcttcccgcactgaacgagaagataggcaaagaaaacattcaaatgcgt
cacattgtagaggacagagagccaccagaggggctttttaagaacctcgagcccgataac
acggccatcgatgactctatagctgctgtcatagccagagcgtgtgctgaaagggagccc
gaccccttcgccttctcctcgggctctgattccgacagcaatggattctcaagccccaag
aggctgaccatcatggagcccgccacccccaaagcccccatcggaacagctaacctgtta
aaggacacgtcaacgccgctccacctgcaggtgcacccgggactcggaaactggaccctg
gaggattcgatcaacgaggtggtccggagggccaatcaaggcggtccgtccgcaccgcct
cagagtcaggcagagtacgcgtcatctggatcggcctcgccacccacccccgagcctctg
ctcaaagtgttcgaggagaagaacaagatcggaccgccgccagatctgaagaagaagctg
aagaaggagcttaaagccaagatgaagaagaaggagaagccgaaagacagggaccgggag
agggagaagggaaagctgaaggataggagcaaggagaaaaacaaggacagaaacaaggag
ttttccaaggacatgaagatgccttggaaggagcttggaggaagcaacgaagaccacttt
ggacagctggacttcagtctgtcggacatccccatcaagatcaaatcaaaagacggagac
gtccccaagaaagagaaggaaaagcataaagacaaaaagaaggataaagagaaaagcaaa
aaggacaaggataagagggaaaaggggaaagacaggaacaaggaggacaagcagaagcag
cccaccgtgccgcctttcgtcctgagcgaagtgccttccctgttcagcccctccacctgc
ctgcggatgccccctatgctgccgccattccccccactccttcaggaggaggggaagagc
aaggagaaggagaggaagaaggaaaagaaggagaaaaagaagaagaaagacaaggagaag
gataaggagcgagagaaagccaaagagagggagagggagaaggaggagaagaggaaagaa
aaggagaaggagaaggacaagagagagaaggagaaagaaaaggagaagattcgattagag
aaggtgaaagcggacgctccagcggtcttaccctctccagtcatccccagactgaccctc
cgagtgggagcaggtcaggacaaaatagttattagcaaggtggttcccagttcggagacc
aggacacccaccccaaaggctcccgccgccaaatcgggacccgggaatcgtcctcgaaca
ccccctccagccccgatcctgccccccgctcttccaattctgcctgcagctgccccccca
cctctagccaccccccccacagcttcatctttgctttgcatgccatctatgcttcctccc
tcagcttctgtcaagactccagtgcgcagcgttgtcacggagaccgtcagcacctatgtg
attcgggatgaatggggaaaccagatctggatttgtcctggatgcaacaaacctgacgat
ggtagtcccatgatagggtgtgacgactgtgacgactggtatcactggccttgtgttggg
atcgtggcggagcctcccgaggaccagccgtggttctgtgtgaaatgttcctgcaagaag
aaggacaagaaacacaaaaaaaagaaacacaaaccacactga
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