Oryzias latipes (Japanese medaka): 101163578
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Entry
101163578 CDS
T02443
Name
(RefSeq) cysteine protease ATG4D isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04136
Autophagy - other
ola04140
Autophagy - animal
ola04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
101163578
04140 Autophagy - animal
101163578
04136 Autophagy - other
101163578
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ola01002
]
101163578
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101163578
03029 Mitochondrial biogenesis [BR:
ola03029
]
101163578
Peptidases and inhibitors [BR:
ola01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
101163578
Membrane trafficking [BR:
ola04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
101163578
Mitochondrial biogenesis [BR:
ola03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
101163578
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
101163578
NCBI-ProteinID:
XP_004071879
UniProt:
H2ML41
LinkDB
All DBs
Position
8:complement(21561435..21571097)
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AA seq
452 aa
AA seq
DB search
MNPSMLCDDLPAADDPMDDWLFLSHKSVEFLSDTTSLQETGDKGKLKSKLVSVWNSVKYG
WSLKQKTKFSKSSPLILLGKSYELKDEANKERFRRSFASLLWLTYRRGFPQLAGSSLTTD
SGWGCVLRTGQMLLARGLLTHLMPPGWMWSVWYRAVKDDLDLPHHADCTDCKSNMRCRYQ
SLGSLYDRPLEAMHRKVVSWFADHPKAPFGIHRLVELGASSGKKAGDWYGPSIVAHILQK
AVAASVDLPNLVVYVAQDCTIYLQDVRGLCERPPPHSWKSVIILVPVRLGGQDLNPSYIS
CVKKLLELQCCIGIIGGRPKHSLFFVGFQDDQLLYLDPHYCQLTVNVTKENFPLESFHCK
YPRKMPFSRMDPSCTIGFYASGQQELELLCTNVNEVVSTSAEGYPMFIFSEGESWKDEEH
SSSPVHRVTYIQRSSDLKRVSTSSSMDEFVLL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccagcatgctttgcgatgacctgccagctgctgatgatcccatggatgactgg
ctcttcctgtcgcataagtctgtggagtttctgagcgatacaacatctctgcaggagacg
ggggacaaagggaaacttaaatccaagctggtttctgtctggaacagtgtcaaatatggc
tggtccttaaagcagaaaacaaaattcagcaagagctctcccctgatcttacttggaaag
tcgtatgagctcaaggatgaagcaaacaaagagcgtttccgtcgctcctttgcatccctc
ctgtggctgacgtacaggcggggcttccctcagctggctggctcatccctgaccacggac
agcgggtggggctgtgttctacggacgggtcaaatgctgctggctcgaggtctcctcaca
cacctgatgcccccaggctggatgtggtcggtgtggtaccgggctgtgaaggatgacctg
gacctgcctcaccatgcagactgcaccgactgcaaatcaaacatgaggtgtcgatatcag
agcctggggtccttgtatgacagacctctagaggccatgcacagaaaggtggtttcctgg
tttgcagaccatcctaaagccccctttgggatacacaggcttgtggagttgggtgcaagt
tcaggaaagaaggccggggactggtacggcccgtccatcgtggcacacatcctacagaaa
gctgtggcggcttcagtcgaccttcccaatttggtggtctatgttgctcaggactgcacc
atctacctgcaggacgtacgggggttatgtgagcggcctccccctcactcctggaagtct
gtcatcatcctggttcccgtgcggctcggaggacaggacctcaatccctcctacatctcc
tgcgtcaaaaaactcctggagttgcagtgctgtattgggatcattggcggtagaccaaag
cactccctgttctttgttggcttccaggatgaccagctgctgtacttggaccctcattac
tgtcagctcactgtgaatgtgacaaaggagaactttcctttggagtcgtttcattgtaaa
tatcccaggaaaatgccgttctcccgcatggatcccagctgcaccatcgggttttatgca
agcggacaacaggaacttgaactattgtgcacaaatgttaatgaggtggtctccacatca
gcagagggataccccatgtttatattttcagagggggaaagttggaaggacgaggagcac
agcagctcccccgtgcacagggtcacctatatccagaggagcagcgatttgaagagagtc
agcaccagcagcagcatggacgagtttgttctgctgtga
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