Oryzias latipes (Japanese medaka): 101163645
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Entry
101163645 CDS
T02443
Symbol
gle1
Name
(RefSeq) nucleoporin GLE1
KO
K18723
nucleoporin GLE1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03013
Nucleocytoplasmic transport
ola03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101163645 (gle1)
03015 mRNA surveillance pathway
101163645 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101163645 (gle1)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101163645 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
101163645
NCBI-ProteinID:
XP_004086506
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All DBs
Position
9:33288134..33298940
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AA seq
715 aa
AA seq
DB search
MVFVNMLSKHGRWETLEALKNSPKGKLSFDPHWLDRGEDILAGCKDTLSLSPHSGSILER
ISSFSPQKSFLVSKDYGSELSETPSSSSSSASDSNGKNSRRSAAPHNPTLDAEVKHESPG
PECSQDPGPVSPPAISLLSPKAMETAGRILRFQEEQREKAKILLRQRQEVQERLVEEVSN
VESEHLKRFEELTELKQRQEFQSMRDMMDRETKESMGRQEKLKEEQRHRIRILNLRLREL
EMQRLREAELEKQRQAEGREKLRNLNTIQEEILQLNQLLEPSTQTLADLPPSSLSSYSSR
GNQLCSQVSEVVRKTAQGEFPSAEDMTAAERALHDMRGLIRLMQQEVAEAQERKKQQQEQ
EKEQGRQQELQAQQEAQKKAQQLANEKAQKKGLQNSADSVTLAWFKELQDSAARCTQAME
PLCSSKDSQTNKLKLELQKAATIPVSQISSISGRQLREIFNKINGLLSGRSVVSGGRTIS
SSQHPLALNFISYKLAEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPHVGDLILAHLH
KKCPYAVPHYPPMKDGTPVEEYQRILGYRVDANGVEGQDSFLKRMSGMIRLYAAIIQLRW
PFGSKQGSVPHGLDHGWRWLAQMLNMEPLVDVTATLLFDFLEVCGHALMTQYQSQFWKVL
LLLKDEYFPRIEAVTSTGERGSMIRLKQFLETSLQRRHISPPKGQLTSSFWTSSE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggtttttgtcaacatgttgtctaaacatggacgatgggaaactctggaggctctaaaa
aactctccgaaggggaaactttcctttgacccgcactggttagacagaggcgaggacatt
ctggcaggctgtaaagacaccctgagcttgtccccacactctggctccattttggagcgc
atcagctcattctccccacagaaatctttcctggtttccaaagactacggctcagaactg
tcagagacgccatcctcatcatcctcctcagcatctgacagcaatggcaaaaactccaga
cgttcagctgctccccacaaccctactcttgatgctgaggtgaagcatgaaagtccaggt
ccagaatgcagccaggatcctggtcctgtgtcaccacctgcaatctcgctgctgtccccc
aaagccatggagacggcaggtcgcattctcaggtttcaggaggagcagcgcgaaaaggcc
aagatcttactcagacagcggcaggaggtgcaggaaaggctggtggaggaggtgtccaac
gtagaatctgagcacctgaagcgcttcgaggagctaacggagctgaagcagagacaggag
ttccagagtatgagggacatgatggacagagaaactaaagagagcatgggccgtcaagaa
aagctgaaggaagagcagcgccacagaatcaggatcttaaaccttcggctgagggagctg
gagatgcagcgccttcgcgaggctgagcttgagaagcagaggcaggcagagggaagggag
aaattgcgaaacctcaacaccatccaggaggagatcctgcagctcaaccagctgctggag
ccgtccacgcagaccctcgcggacctcccccccagcagcctcagctcctacagcagccgt
gggaaccagctctgctcccaggtgtcagaggtagtgaggaagacggcacagggagagttt
cccagtgctgaagacatgacggcagcagagcgagctctccacgacatgaggggcctgatc
cgcctgatgcagcaggaggtggccgaggctcaagaaaggaagaagcagcagcaggagcag
gaaaaggagcaggggaggcagcaggagcttcaggcccagcaggaggcacagaagaaagct
cagcagttggccaacgaaaaggcccaaaaaaaagggctgcagaacagcgcggacagcgtc
acgctggcatggtttaaagaactgcaggactcagccgctcggtgcactcaggccatggag
ccgctgtgctcctcaaaggactcccagacgaacaaactgaagctggagctccagaaagcc
gccaccatccctgtcagccaaatttccagcatctccggcaggcagctcagagaaatcttc
aacaagatcaacggcttgctgtcgggtcggtcggtggtgtctggggggaggaccatctcc
agctctcagcacccgctggccctgaacttcatcagctacaaactagcggagaagtttgtg
aaacagggtgaggaggaggttgcatctcatcacgaagctgccttccccattgctgtggtg
gcctctggaatctgggagctgcacccccatgtgggggatctcatcctggctcacctgcat
aaaaagtgcccctacgccgtcccacattaccccccaatgaaggacggcactcctgtggag
gaataccagaggattctcggttaccgtgtggacgccaacggcgtggagggtcaagacagc
ttcctgaaaagaatgtccgggatgatccggctctatgccgccataatccagctccgatgg
cccttcggctcaaagcaggggtctgttcctcacggcctggaccacggctggcgctggctg
gcccagatgctgaacatggaacctctggtagacgtcactgctacgctgctgtttgacttc
ctggaggtttgtggccacgcattgatgacccagtaccagagtcagttctggaaagtcctc
ctgctgctcaaagacgagtatttccccagaattgaagccgtgaccagcactggagagagg
gggtccatgatccgactcaaacagtttttggagacgtcgctgcagaggagacacatcagt
ccacccaaaggccaactgacttccagcttctggacgtcctctgagtga
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