Oryzias latipes (Japanese medaka): 101163673
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Entry
101163673 CDS
T02443
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03272
Virion - Hepatitis viruses
ola04514
Cell adhesion molecules
ola04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
101163673
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101163673
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101163673
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ola01009
]
101163673
Protein phosphatases and associated proteins [BR:
ola01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101163673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
FliJ
DUF2070
DUF3496
DUF4200
NagJ_C
Wzy_C
FTA4
Cluap1
Motif
Other DBs
NCBI-GeneID:
101163673
NCBI-ProteinID:
XP_004074505
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All DBs
Position
12:1587355..1596697
Genome browser
AA seq
493 aa
AA seq
DB search
MSRPKESPPPYEAGGSFIGPAQPAYSYYPDDEFQHFYRWSSPPGIIKIMAIIVIVLCVAI
FACVASSLAHDSPGAFSSMGGYMPGYGSGGYGSSYGGGSYGGSSYGGGYGGGSYGGMYAD
PRQGKGFFIALAVMVFIFSLVVFIIIVSHQRLTESRKFYLATAIICAILALLMLIGTIVY
LMAVNPAAQATGSIMGNQIASMCAPYQQQQMMGPMVNQYLYYYCVVEPHEAVAVVFGFLA
TAALIIMVVFAVKTRQKISSFGKSNIFWKKVKDVEEVAPGQDVEAWVNGASGPMSEAAFS
AYPEKRRGSSNYLDEENIYDKPPSIGTPQPFLEEQALQKAAPYNSSSELASSYGQPKKPR
AGRPRRNNGQDYDTDYNSSGDELDDDDFDSEYPPIKNEQERNDYKREFDRDHQEYKNLQA
DLDKVNRRLSELDEELDQLEEGSPQFLDAMDEYNAVKSSKKTPDYLVKKRRCKYLKAKLS
HIKKMVSDYDRRG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtccagacccaaagaaagtcctcctccctacgaagcaggtggttctttcatcggcccg
gctcagccggcctactcctactaccccgatgacgagttccagcacttctaccgctggtcg
tctccgccgggcatcatcaagatcatggccatcatcgtcatcgtcttgtgcgtggccata
ttcgcctgcgtggcgtcctcgttggctcatgacagccccggcgccttctccagcatgggt
ggatacatgccgggatacggcagcggcggttacggcagcagctatggcggcggcagctac
ggcggcagcagctacggcggtggctatgggggaggctcgtacggcgggatgtacgctgat
ccccgacagggcaaaggcttcttcattgctctggcagtgatggtcttcatcttttctctg
gttgtcttcatcatcatcgtgtcccatcagaggttgacggagagcaggaagttctacctg
gccacggcgatcatctgcgccattctagcgctgctgatgttgatcggcaccatagtatac
ttgatggccgttaacccagcggcccaggccaccggctccattatgggaaaccaaatagcc
agcatgtgcgctccgtatcaacagcagcagatgatgggcccgatggtcaaccagtacctg
tactactactgcgtggtggagccgcatgaggccgttgccgtcgtgttcggcttcctggcc
accgcagccctgatcataatggtcgtctttgcggtgaaaactcgccagaaaatctccagc
tttggaaagagcaacattttctggaaaaaagtgaaggatgtggaagaagtggcaccaggt
caggatgtagaagcctgggtgaacggtgcgtcgggtcccatgtcagaagctgctttttcc
gcctatccagagaaacggagaggttccagcaattatctggatgaagaaaatatctacgac
aaacctccatccatcggcaccccgcaacctttcctggaagagcaagccctgcagaaagca
gctccgtacaacagttcctctgaattggcaagctcatacggacaacctaaaaagcctcgc
gcaggtcggccacgccgcaacaacggacaggactacgacaccgattacaactcctctgga
gacgagctggacgacgatgactttgacagtgaatatcctccaataaaaaacgagcaggag
cgcaacgactacaagcgggagtttgaccgagaccatcaggagtacaagaacctgcaggcg
gacctggacaaagtcaacaggaggctgtcggaactggacgaagagctggaccagctggag
gagggaagtccacagttcctggatgccatggatgagtataacgccgtcaagagctccaag
aagactccagattacctggtgaagaagcgcaggtgtaaatacctgaaggccaagctcagc
cacatcaagaagatggtcagcgattatgaccgcagaggctga
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