Oryzias latipes (Japanese medaka): 101163678
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Entry
101163678 CDS
T02443
Symbol
hnf1b
Name
(RefSeq) hepatocyte nuclear factor 1-beta isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101163678 (hnf1b)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
101163678 (hnf1b)
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
LolA
HTH_5
Motif
Other DBs
NCBI-GeneID:
101163678
NCBI-ProteinID:
XP_011480689
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Position
13:complement(10213237..10227144)
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AA seq
574 aa
AA seq
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MFSKMVAKLTSLQQELLSALLDSGVTKDVLIQALDDMDPSPPSFGVKLENLPLSPAAPQS
GKMNGADPDSKPVFHTLTNGHGNKGKLSGDEGSEDGDDYDTPQILKELQSLNTEEAAEQR
AEVERMLAEDPWRAARMIKGYMQQHNIPQREVVDITGLNQSHLSQHLNKGTPMKTQKRAA
LYTWYVRKQREILRQFNQAANGSGGSMSDKSNQDPAFFFPEFNSSGQGMSQPGDEVGSEP
SCKKMRRNRFKWGPASQQILYQAYERQKNPSKEERESLVEECNRAECLQRGVSPSKAQGL
GSNLVTEVRVYNWFANRRKEEAFRQKLALDAMGAPAHGMSSLLSHSSPHHPQTSASPPMR
YSQGPGEAASSSSISHHSSNGMVTSQSVLQQVSPGGLEHSHSLLSPDAKMISGSGGGLPP
VSTLTNIHSSHHSHQQTQNLIMPLTGVMAIAQSLNTSQSQTVPVINSVAGSLAALQPVQF
SQQLHSPHQQSLMQQSPSHMSQQPFMATVTHSHMYSHKQEPPQYSHPSRFPSAMVVTDAN
SLSTLSSMSSNKTDAPVNKMVQLGGLSWCPLQAW
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgttttctaaaatggtagccaagctgacatctctgcagcaggagctcctcagcgccctg
ctggactcgggagtaaccaaagacgtcctgatccaggccctggacgacatggaccccagc
ccgccgagctttggagtaaaactggagaacttgcccctgtcgcccgctgcgccgcagagc
ggcaagatgaacggcgcagacccggactccaagcccgttttccacacgctcaccaacggc
cacggcaacaagggcaaattgtccggggacgaaggctccgaggatggagacgactacgac
accccgcagatcctcaaggagctccagtcgctcaacacggaggaggccgcggagcagcgc
gcagaggtggagcgcatgctggcagaggacccatggcgagcggctcgcatgatcaaaggt
tacatgcagcagcacaacatcccccagcgagaggtggtggatatcacagggctgaaccag
tctcacctctcgcagcacctcaacaagggcacgcccatgaaaacccagaagcgagctgcc
ctctacacctggtatgtcaggaaacagcgggaaattctcagacagttcaaccaggccgca
aacggttcaggtggcagcatgtcggacaaaagcaaccaggatccagccttttttttccca
gagttcaactcctccggtcagggcatgagtcagcccggcgacgaggttggcagtgaacct
tcctgcaagaaaatgagacgtaaccgtttcaaatggggccctgcctcccagcaaatcctg
taccaagcttacgaaaggcaaaaaaaccccagcaaggaggaaagggagtcgctggtggag
gagtgcaacagagctgagtgtcttcagagaggcgtctccccttccaaagctcaaggcctc
ggctccaatctggtcacagaagtgcgggtttataactggtttgccaacagacgtaaagag
gaagccttcaggcagaagttggctttggacgccatgggtgctccggcccacggcatgagc
tcactactctcccacagctccccacatcatccccagaccagcgcatcacctcccatgcga
tacagccaaggccctggtgaggccgcctcctcctccagcatcagtcaccacagcagcaac
ggcatggtgacaagccagtctgtgcttcagcaggtgtctccgggaggcctggagcatagt
cacagtctgctgtcgcctgacgccaaaatgatttcaggttcaggtggaggacttcctcct
gtcagcactctgacaaacatccacagctcccatcacagccaccagcagacgcaaaacctt
atcatgcctctcactggagtcatggccatagcacagagtttgaacacgtcgcagtctcag
acggtgccggtgattaacagcgtggcgggcagccttgcagcactgcagccggtgcagttt
tcccagcagctccacagcccccaccagcagagcctcatgcagcagtcccccagccacatg
agccagcagccattcatggcgacagtcacacactcacacatgtactctcacaaacaagag
cccccgcaatactcccacccgtcacggttcccttcagcaatggtggtcacagatgccaac
agcctcagcaccctgagctccatgtcctccaacaaaacggatgctcctgtaaacaagatg
gtgcaacttgggggtctctcttggtgtcctcttcaagcttggtga
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