Oryzias latipes (Japanese medaka): 101163754
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Entry
101163754 CDS
T02443
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04010
MAPK signaling pathway
ola04020
Calcium signaling pathway
ola04510
Focal adhesion
ola04540
Gap junction
ola04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101163754 (pdgfd)
04020 Calcium signaling pathway
101163754 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101163754 (pdgfd)
04540 Gap junction
101163754 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
101163754 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ola04052
]
101163754 (pdgfd)
Cytokines and neuropeptides [BR:
ola04052
]
Cytokines
Growth factors (RTK binding)
101163754 (pdgfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
101163754
NCBI-ProteinID:
XP_011481083
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Position
13:21180894..21250672
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AA seq
382 aa
AA seq
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MVSAMKGSGLLQMWILFLLGAVSGVGRAQVSTARVLRGNTRRDDSNHLTTDLYQKEENIV
VTSAGGFIQSPRYPNAYPRNLLLSWKLLSAPGSRIHLEFDAQFGLEEPENGVCRYDFVEV
EDQAETSTIIWGRWCGQNAPPSLKSKSNVLRVTFKSDDYFVAKPGFKIYYSLLIDRSLLT
SKNNLEAVTSPMSHDVGVKEVPTPQTVVPLSLEDLDRTIASFDTVEQLLKSLSPSTWRED
LDSIYTQTYVHYRSRSYYLAGRHDKVDLNRLYDDVKRYSCTPRNYSVNLREELRITNAVF
FPRCLLVKRCGGNCGCGSKSWQFDCTCQPTKTATKLHEVLKYAPDPTLHKRPQSPRLRWV
IDEIFLSHHDTCECVCPSQPPR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcgctatgaaaggatcagggcttctccagatgtggatactttttttgttgggg
gccgtgagtggagtggggagagcccaggtctcaactgccagagttctgaggggaaacacc
aggagagacgacagcaatcacctcaccacagacttgtaccagaaagaggaaaacattgtg
gtaacatcggcgggtgggttcatccagagcccgcgctaccccaacgcttatcctcgcaac
ctgctgttgtcatggaaactgctatcagcgccagggagccgcatacacctggagtttgat
gcgcagttcggtctggaggagccagagaatggggtttgcaggtatgactttgttgaggtg
gaggaccaggcggagaccagcaccataatttggggccgctggtgtgggcagaacgcacct
ccaagtctgaagtctaaaagcaacgtgctgagagtcaccttcaagtctgatgattacttt
gtggcaaagccgggcttcaaaatctactattcgctgctgattgaccgctctctgctcaca
tccaagaacaatttggaggctgttacttcgccaatgtcgcacgacgtgggtgttaaagag
gtgccaactccacagacagtggttcctttatccctggaggatttagacaggaccatagct
tcctttgacactgtggaacagcttctgaaatcattgagtccaagtacgtggagagaagac
ctggacagcatctacacacagacatatgttcactatagatccagatcctattatctggct
ggcagacacgacaaagttgatctgaaccgtctctatgacgacgtcaagagatacagctgc
acccctcgcaactactcagtgaacctgcgcgaggagctgaggatcaccaacgccgtcttc
ttccctcgatgtctgctggtgaaacggtgcggaggaaactgtggctgcggcagcaaaagc
tggcaattcgattgcacttgccagcccaccaaaacggcaaccaaactgcacgaggtgctg
aagtatgccccagaccccaccctgcataaacgtcctcagagcccgagactgcgctgggtc
atcgatgaaatcttcctttcccatcatgacacgtgtgagtgtgtgtgtccttcccagccc
cctcgctga
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