Oryzias latipes (Japanese medaka): 101163808
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Entry
101163808 CDS
T02443
Name
(RefSeq) nuclear factor 7, brain-like
KO
K12012
tripartite motif-containing protein 35
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101163808
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101163808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
SPRY
zf-C3HC4_2
U-box
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-rbx1
zf-RING_6
DUF4618
zf-RING_10
Prok-RING_4
zf-Nse
zf-ANAPC11
PEHE
DUF1993
Sina_RING
zf-RING_4
End3
Motif
Other DBs
NCBI-GeneID:
101163808
NCBI-ProteinID:
XP_004069065
UniProt:
H2M5B2
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All DBs
Position
5:20557543..20559853
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AA seq
464 aa
AA seq
DB search
MASRFEEDLCCPVCRDIFKDPVLLSCSHSFCRDCMRTWWTQKPNLMCPLCKTISQNDNPP
SNLALKNLCESFLQDQDQRASEALCSLLSEKLKLFCLDHQQPLSIIYRDSGKHVDHSFIP
INEAAQEHRENLQRSLKPLKEKLELKKKIKENFDETAKHIKVQSKRTEMEIKKQFKKLHQ
FLEEEEETRLTALREEEEQKSGRMKEKMKALNKQIESLSETVRVAEEQLKDEDVSFLNNY
KGTVERVQRCPLLEDPQLHSGALIDQAKHLGNLAFSIWSSMKKIVSYCPVILDPNTAHPA
LILSEDLTSVRDGGKQLPNNPERFDYFSYVLSSEGFSSGVHSWDVLVKEDSDWELGVLAE
SDCRKGNVQSGLWILGSYENKYSAWSPAALHFNLEVQKKLQRIRVTLDWDSGKVSFFDPN
TNTHIHTFTHTFTEKLFPCFNVDGKLEVLPWSVSASVKQPGVYL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagatttgaggaagatttgtgctgtcctgtgtgtcgggacatcttcaaagac
cccgttcttctgtcctgcagccacagcttctgcagggactgcatgaggacctggtggaca
cagaaaccaaacctcatgtgtccactctgcaaaacgatctctcagaatgataatccacct
tctaacctggctctgaagaacctgtgtgagtccttcctgcaagaccaggaccagcgagct
tcagaggctctctgcagtctgctctctgagaaactcaagctcttttgtttggatcatcag
cagccgttgagcatcatctacagagactcaggaaaacacgtggaccacagctttattcct
attaatgaagctgcgcaggaacacagagagaacctacagagaagtctaaagcctctgaag
gaaaaactggagctcaagaagaaaattaaagagaattttgatgaaacagcaaaacacata
aaagtccagtccaaacgcacagagatggaaatcaagaaacagttcaagaaacttcaccag
tttctggaggaggaagaggagaccaggctgacagctctgagggaggaggaagagcagaaa
agtggtaggatgaaggagaagatgaaggctctgaacaaacagatagaaagtctgtcagaa
actgtcagagttgcagaggagcagctgaaggatgaagatgtctcattcctgaacaactac
aagggtacagtggagagagtgcagcgatgccccctgctggaggatcctcagctgcactct
ggagctctgatcgaccaggccaaacatctaggcaacctggccttcagcatctggagcagc
atgaagaaaatcgtctcttactgtcctgtcattctggatccaaacacagctcatccggct
ctcatcctgtcagaagacctgaccagcgtgagagacggagggaagcagctccccaacaac
ccggagagatttgactacttcagctacgtcctgagttctgagggcttcagctcaggcgtt
cacagctgggacgtccttgtcaaagaggattctgactgggaactgggcgttttggcagaa
tccgattgcaggaaggggaacgtccagtctgggctgtggattctgggatcctatgagaat
aagtactctgcatggtcaccagctgctctccacttcaacttggaggtgcaaaagaagctg
cagaggatcagggtgacactggactgggacagtgggaaggtgtcattctttgaccctaac
accaacacacacattcacacctttacacacaccttcacggaaaagttgtttccatgtttc
aacgtcgacggaaaactggaggtgttaccatggagcgtctcagcctctgtaaaacagccg
ggagtgtacttgtaa
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