Oryzias latipes (Japanese medaka): 101163885
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Entry
101163885 CDS
T02443
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03082
ATP-dependent chromatin remodeling
ola03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101163885
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101163885
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ola01009
]
101163885
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101163885
03036 Chromosome and associated proteins [BR:
ola03036
]
101163885
Protein phosphatases and associated proteins [BR:
ola01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101163885
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101163885
SWI/SNF complex
101163885
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101163885
PBAF complex
101163885
SWI/SNF complex
101163885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
101163885
NCBI-ProteinID:
XP_023814684
LinkDB
All DBs
Position
9:complement(33247952..33264850)
Genome browser
AA seq
373 aa
AA seq
DB search
MALSKTFGQKPVKFQLEEDGEYYMIGSEVGNYLRMFRGSLYKRYPSLWRKLATVEERKKI
VESSHDHGYTQLATSVTLLKASEVEEILEGNDEKYKAVSISTEPPAYLREQKAKRNSQWV
PTLPNSSHHLDAVPCSTTINRSRLGRDKKRTFPLCFDDHDPAVIHENATQTEVLVPIRLD
MEIEGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLTFVPAIASAIRQQIESYPTDS
LLEDQTDQRVIIKLNIHVGNISLVDQFEWDMSERENSPEKFALKLCSELGLGGEFVTTIA
YSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNT
RRMRRLANTAPAW
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgagtaagacgtttggtcaaaaaccggtgaaatttcagctggaggaggatgga
gaatattacatgattggatcggaggtgggaaactacctccggatgttcagaggctcgctg
tacaaaagatacccgtcactatggagaaaactggcaactgtagaagaacgcaagaaaata
gtggaatcgtcacacgaccacggttatactcagctggccaccagcgtgacgctgctgaag
gcctccgaggtcgaggagatcttggaaggaaacgacgagaagtacaaagctgtctccatc
agcaccgagccccccgcctacctcagggagcagaaggcaaagaggaacagtcagtgggtt
cccacgctgcccaacagctcccatcatctagatgcagtcccttgctccaccaccatcaac
cgcagtcgactcggtcgcgataagaagaggacgttccccttgtgctttgatgaccacgat
ccagcagttatccatgaaaatgccactcagactgaagttctggttccaatccggctagac
atggagatagagggccagaagcttagggatgcttttacctggaatatgaatgaaaagctc
atgacccctgagatgtttgctgaaatcctgtgcgatgacctggacctgaaccctctgacc
ttcgtcccggccattgcctctgccattcggcagcaaattgagtcgtacccgacagacagc
ctcctggaagaccagacagaccagagggtgatcatcaagctcaacatccatgttggcaac
atttccctggtggaccagtttgagtgggacatgtctgagagggagaactccccagagaag
tttgccctgaagctttgctctgaactgggtctgggcggagaatttgtcaccaccattgcc
tatagcatccgaggtcagctgagctggcaccagaggacctatgccttcagtgagaaccct
ctgccaacagtggagatcgccatcagaaacaccggtgatgctgaccagtggtgccccctg
ctggagaccctgacggatgcagaaatggagaagaagatcagagaccaggacagaaataca
aggcgaatgagacgattggccaacacagcaccagcatggtag
DBGET
integrated database retrieval system
