Oryzias latipes (Japanese medaka): 101163935
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Entry
101163935 CDS
T02443
Symbol
puf60
Name
(RefSeq) poly(U)-binding-splicing factor PUF60 isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101163935 (puf60)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101163935 (puf60)
Spliceosome [BR:
ola03041
]
Complex A
U2 snRNP components
U2 related factors
101163935 (puf60)
Complex B
101163935 (puf60)
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GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
101163935
NCBI-ProteinID:
XP_023806012
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Position
20:21308235..21314927
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AA seq
540 aa
AA seq
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MAVTETAGGEALKMENGQGTGSKLGLPPLTPEQQEALQRAKKYAMEQSIKSVLVKQTIAH
QQQQLTNLQMAAVTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFA
PFGPIKSIDMSWDSVTMKHKGFAFVEYDVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQ
AQPIIDQLAEEARAYNRIYVASVHPDLSDDDIKSVFEAFGRIKSCMLARDPTSGRHRGFG
FIEYEKPQSAVDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGGLPPAAAVAAAAAT
AKITAQASMNPFQRDLMAFQEAVAGASVLGALAAPQLLGQQIGIPQAVMAAQAPGVITGV
TPVRPAIPVIPQVGLVNPVLASPPVLSNQAASSSQQEKKEEKEEALQDGTGQEMLSDQEH
MSISGSSARHMVMQKLLRKSESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGTVNRVIIY
QEKQGEEEDADIIVKIFVEFSAASEMNKAIQALNDRWFGGRKVVAEVYDQDRFNSSDLSA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcacggagactgcgggaggtgaagctctgaagatggagaatggacaaggcaca
ggctccaagcttggcctgccgcctctcactccagagcagcaggaggctctgcagagggca
aagaagtatgctatggaacaaagcattaagagtgtgttggtgaagcagaccatagcccat
cagcagcagcagctcaccaacctgcagatggcagcagtgacaatgggctttggagatcct
ctctcacctttacaatcggtggcagctcagaggcagcgtgcactggcaatcatgtgtcgg
gtttacgtgggctccatttactacgagcttggagaggacaccatccggcaggccttcgcc
cccttcggcccgatcaagagcatcgacatgtcctgggattcggtcaccatgaagcacaag
gggtttgcctttgtcgagtacgacgtgccagaagctgctcagctggctctggagcagatg
aactcagtcatgttgggggggcgaaacataaaggttgggcggccaagtaacatcggtcaa
gcgcaacccatcattgaccaactcgcagaagaggcgcgcgcctataaccgaatctacgtc
gcgtccgttcaccctgatctgtcagatgatgacatcaagagtgtctttgaagcctttgga
aggatcaagtcttgtatgttagccagagaccctacttcagggcgacacagaggcttcggt
ttcattgagtacgaaaagcctcaatcggccgtcgatgccgtttcttcaatgaatctattc
gacctggggggtcagtacctgcgtgttggcaaagccgtgactccgcctatgcccctactc
actcccacaaccccaggtgggcttccacctgctgcagccgtggctgcggcggcagccact
gctaagataacggcccaggcaagtatgaatcccttccaaagggatttaatggccttccag
gaggctgtagctggtgcgtcagtcttgggggcgttggctgcgccccaacttctcggtcag
caaataggaatacctcaagctgtcatggctgcccaggctccaggagtcattacaggtgtg
acgccggtgcgtcctgccataccggtgataccacaagttggcttggtgaaccccgttctg
gcatcgccgccggtcctttctaaccaagccgccagctccagccagcaggagaagaaagag
gagaaggaggaggccctccaggacggcacagggcaggagatgctgagcgaccaagagcac
atgagcatctcgggcagcagcgccaggcatatggtgatgcagaagctgctgagaaagtcg
gagtccacggtgatggtgctccggaacatggtcggtccggaagacatcgacgacgacctg
gaaggagaagtgacggaggagtgcgggaagtttggcaccgttaaccgggtgatcatctac
caggagaagcaaggcgaggaggaggacgccgatatcatcgtcaagatcttcgtggagttc
tccgccgcctcagagatgaacaaagctatccaggctctcaacgaccgctggtttgggggt
cgtaaggtcgtcgctgaagtctatgaccaagaccgttttaacagcagcgatctctctgcg
taa
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