Oryzias latipes (Japanese medaka): 101164003
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Entry
101164003 CDS
T02443
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2 isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101164003
Ion channels [BR:
ola04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
101164003
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
DALR_1
IRK
Motif
Other DBs
NCBI-GeneID:
101164003
NCBI-ProteinID:
XP_023820729
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All DBs
Position
17:complement(14222026..14310507)
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AA seq
1012 aa
AA seq
DB search
MRHRYAGAVHQHQIPARKTEQHREQVAPVFCLPPPPSSRERTTAAAHRQSLQELPCLIQP
PRKPVHSGDALPPASYTTHPPAQRGTAASSGEPAHLQQDPWAPSGYQQQPPPPPPLQSEG
EPFFPGCHCSFSEQEAIVLQNKHDPLPPQPSSLFPAPIAIPPPPPPSSSSLLLSQGSREG
DRFRRSGNNCKEGSIVERCRGGGGGGHRDHRQLLQQQQQRCHFRLQQRDPSPEGSRANSE
TVNVCEATESGRAFGSQSQELQQQQQQQQQQQQQQQQQIPQLRAQQQLLVGSSLPVNYCA
NGSGELCKTQQAPLLRQQQQQQQQQQQQQQQQQGALGICARRPQQHCEQDRNKCAKIAAH
GGQAQPHSRVTQPVTPQPHAENSDCSSRSSSSSSSRGSPNYGSSYHLWPESPHKGEERIC
IDLHKATTEQRKLSHAGSKPSLSESSGRLPQIAMNTCKYNGGVVRPLVGSLASSSRRNLA
ELDSETQPLQTLHSSGLEVVVSKGNSGEDPSKASNESLVREGSGRGGGRAPQKKNRDIGY
KLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYTKESSYSFALKCLISLSTV
ILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIVLELLVCAIHPIPGQYVFTWTA
RLAFTYTPSVADADVDIILSIPMFLRLYLIGRVMLLHSKLFTDASSRSIGALNKINFNTR
FVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERDTMYHDKQEVTSNFLGAMWLISITF
LSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLC
KRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHQAQKLRSVKMEQRKLN
DQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGTLEDKLDSVTGSLQALPCLISQAIS
QQQQDFLDGFVHRFRPASLASERSERSERSWTSTTRRRRSPSTAPHTSSDSG
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcggtacgcgggagctgtccatcagcaccagatccccgccagaaagaccgag
cagcaccgagagcaagtcgcgcccgttttctgcctgccacccccgccctcctcccgagag
cgcaccaccgccgccgcgcaccgccagagtctccaggagctcccgtgtctgatccagccc
ccacggaaacccgtccacagcggagacgcgctccctccggcgagctacaccacccaccca
ccggcgcagcgaggaaccgcagccagcagcggggagccggcgcacctgcagcaggatccc
tgggccccgtccggctatcagcagcagccgccgccgccgccgccgctgcagtcggagggg
gagcctttttttccaggctgccactgcagcttttcagagcaggaggcgatcgttctacaa
aacaagcatgaccctcttcctccgcagccctcctcacttttcccggcacccatagccata
ccaccaccgccgccgccgtcatcctcctctctgcttctttcccagggatcaagagaaggg
gatcgtttccgaaggagcggaaacaattgcaaggaggggagcatcgtggaacgctgcagg
ggaggaggaggaggagggcaccgagaccacaggcagttgttgcagcagcagcagcagcgc
tgtcatttcagactccaacagagggacccctcccctgaaggaagccgtgcaaactcggaa
actgtaaatgtgtgcgaggccacagagtctgggagagcatttgggagtcagtctcaggag
ctgcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcaacagatccct
caattacgcgcgcagcaacagctgctggtgggaagcagcttgcctgtcaactactgcgcc
aacggctcaggagagctatgtaagactcagcaggcaccactgctgcgacagcaacaacaa
caacaacaacagcagcagcagcaacagcagcagcagcaaggtgcgctgggaatctgtgcc
cggcgtccgcagcaacactgtgaacaagatcgcaataagtgcgcgaagatcgccgcgcac
ggcggccaggcgcagccgcacagccgcgtaactcagccggtcacaccgcagccacacgcg
gagaattcggactgcagcagcaggagcagcagcagcagcagcagcagaggcagccccaac
tacggctccagctatcacctgtggccagagagcccgcataaaggagaggagagaatctgc
atcgacctccataaggccaccactgagcagaggaagctgagccatgctggatcaaagccc
tctctctctgagagcagtggccgactccctcagatagccatgaacacctgcaagtacaat
ggcggagtggtgagaccattagtgggcagcctggcgtcctcgtcgcgccgcaacctcgca
gagcttgactcggagacacaacccttacagacgctgcacagctctggcctagaggtggtg
gtttccaagggcaacagtggtgaagaccccagcaaggcttccaacgagagcttagtcagg
gagggcagcgggcgaggtggggggagggctccacagaagaaaaacagggacattggctac
aaacttggtcatcggagggcgctgtttgagaagaggaagcggctgagtgattacgcactc
atcttcgggatgtttgggattgttgtcatggtgacagagacagaactttcgtggggggtt
tacactaaggaatcttcatactcatttgcactgaaatgcctcatcagcctttccactgtt
atactgcttggtcttataataatgtaccacgcccgggaaatccagctcttcatggtcgac
aacggtgcggacgactggaggatagccatgacgtacgagcggatcttctttatcgtgctg
gagctcctggtgtgtgccatccaccccatacctggccaatacgtcttcacgtggacggcg
cggctggccttcacctacacgccgtccgtggcggacgcggatgtggacatcatcctctcc
atccccatgttcctgagactctacctgatcggcagggtcatgcttctccacagcaagctg
ttcacggacgcttcgtcccgcagcataggcgccctgaataagatcaacttcaacacgcgc
ttcgtcatgaagacactcatgaccatctgtccgggaactgtgttgctggtgttcagtata
tcctcctggatcattgctgcatggactgtgcgtgtctgtgagagggataccatgtatcac
gacaaacaggaagtgaccagtaacttcctgggagccatgtggctcatctcaattaccttc
ctctccattgggtatggggacatggtgccacacacgtactgtgggaaaggcgtttgtctg
ctgacagggatcatgggtgctggttgcactgcactggtcgtcgcagtggtggccaggaag
ctggagctgaccaaggctgagaagcatgtccacaacttcatgatggacacacaactctgc
aaacgagtgaagaacacagctgccaatgtactcagggaaacatggctcatttacaaacac
accaagctggtcaagaaaatagaccacgccaaggtccggaaacaccagcgcaagtttctc
caagccattcaccaagctcagaaactgcgcagtgtgaagatggagcagaggaaactgaat
gatcaggccaacaccttggtggacctggcaaagacacagaatgtgatgtatgacctggtg
tcagagctgcaggagcgcagtgaagagctagacaagcgcatcggcacgttggaggacaag
ctagactcggtaacgggcagcttgcaggcactgccctgcctcatctcccaagccatatcc
cagcagcagcaggacttcctggacggctttgttcaccgtttccggcctgcttccctagca
tcggagcgctccgaacgctctgagcgatcctggacttccaccacccgtaggaggcgctct
ccgtcaacagcaccacacacttcctccgacagcggataa
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