Oryzias latipes (Japanese medaka): 101164035
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Entry
101164035 CDS
T02443
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04517
IgSF CAM signaling
ola04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101164035
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101164035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ola04812
]
101164035
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
101164035
Intermediate filaments
Intermediate filament-binding proteins
101164035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
Motif
Other DBs
NCBI-GeneID:
101164035
NCBI-ProteinID:
XP_023809335
LinkDB
All DBs
Position
1:complement(388265..413393)
Genome browser
AA seq
2333 aa
AA seq
DB search
MTTVATELEPMDLQQQYSETVSNRWDDDWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLSRVSCRITDLYLDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKERRSAKDALLL
WCQMKTAGYPNVNIQNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTRLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETE
NLIEKYESLASALLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRMELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGLDLQAVEAATKKHEAIETDIAAYEERVQAV
VAVSKELELECYHDIKRIAARKDNVLRLWEYLLELLKARRQRLEMNLGLQRVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVRAVSCNANKYSVTDGGY
KPCDPRVIQDRVAHLEFCYQELTQLAAERRARLEDSRRLWKFFWEMAEEEGWIREKEQIL
SSLEQGRDLTGAVRLLSQQRALEDEMSGRAGHLQHTITEGRAMVQVGHNGSDKILERIGD
LQAQWAELEQHAAVTRRRLEEALALHQFQADADDVDAWTLDALRIVSSGETGHNEFSTQA
LVRKHKDAAAEVASYRPVIDSLHEQAATLPKEEAESVRGRLAGIEERYKEVAELTKLRKE
ALQDALARHKMFSEANACQVWIEEKEQWLNATEIPEKLEDLEVVQHRFDSLEPEMNNQAS
RVAVVNQIGRQLMHAGSPSDDIKAQQDKLNNRWGLFRDLLDLKKESLNSALGVQNYHLDC
NETKSWIKEKTKVIESTQELGNDLMGVLALQRKLTGMERDLVAIEDKLGDLRGEAQRLAE
EHPDQAKAITGRLAEITAVWEEMKNTLKRREESLGEARKLQQFLRDLDDFQSWLSRTQTA
VASEDMPNTLAEAEKLMAQHDGIKNEILNYEEDYQKMRDMGDMVTRGQTDAQYMFLQQRL
QALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHAEMPPTLEGA
EAAIKKQEDFMTTMDANEDKINGVMEAGRRLASDGNINAEKIKEKVASIDDRHKKNREAA
VELLMRLKDNRDLQKFLQECQELSLWISEKMLTAQDMTYDEARNLHSKWLKHQAFMAELQ
SNKEWLNKIEKDGTLLVSEKPETEVVVKEKLTALHSMWEELESTTQTKAQCLFDANKTEL
FTQSCTDLDKWLGGLEGQIQSEDYGKDLTSVNILLKKQQMLENQVEVRQREVVELQSQVK
ALGQEAKDTDEVDGRRQGVEKKFQELLEPLRHRRNLLVASREGHQFNRDVEDEILWAQER
MPVATSTDHGHNLQTVQLLMKKNQTLEKELQGHQPRIDDILERSQSLLRDQTSGTEGIHR
RLAELQELWDRLREEGRRRHARLQEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQ
SAITMLKKHQIMEQAVEDYAEVVHQLSKTSRGLVANEHPESERIGMRQSQVDKLYAGLKD
LSEERRGKLEERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFAR
DTGNIGQERVDGVNHLADELINAGHGDAATVAEWKDGLNEAWADLLELIDTRTQILAASF
ELHKFYHDGKEILARIADKQKKLPEEMGRDQNTVETLQRMHTSFERDVQALGAQVRQLQE
DAVRLQSSYAGDKADDIQRKDGEVLEAWRILLEACDSRRSRLLDTGERFRFFSMVRDLLL
WMDDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFSTCVELGKALLARKHYAA
AEIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSSREV
GQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEMERRRRPPSPEQ
LHQEEVQQEKSVVMQNGLPSDEDSPWTGLEGGGLVNGLVERSSMEPSPAPSPTMTKKNKH
SQSSTLPLKSQDSPVQMEGLLHRKHEWEGHNKKASNRSWHNVYCVVCHQEMSFFKDSKAA
AQGAAYHNQPPVSLKDATCDVASDYKKKKYVFKLRVADGNEYLFQAKDEEEMSSWIQVIL
NAAASELTDTQSSFPGTPVSGRAQTLPATITLTTESSPGKKEKRFSLFSKKKQ
NT seq
7002 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggtggccaccgagctggagcccatggacctgcagcagcagtacagcgagacg
gtcagcaaccgctgggacgacgactgggacaacgagaacagctcggcccgcctctttgag
cgctcccgcatcaaggcgctggcagatgagcgggaggcggtgcagaagaagaccttcacc
aagtgggtgaactcccacctgtccagagtgtcctgcaggatcacagacctctacctggac
ctgagagacggacggatgctcatcaagctgctggaggttctgtccggagagaggctgccg
aagcccaccaaaggccggatgcgcatccactgcctggagaacgtggacaaggcgctgcag
ttcctgaaggagcagcgggtccacctggagaacatgggctcccacgacatcgtagacggg
aaccaccggctgacgctgggcctcatctggaccatcatcctgcgcttccagatccaggac
atcagcgtggagacggaagacaacaaggagcggcgttccgccaaagacgctctgcttctg
tggtgtcagatgaagacggcggggtaccccaatgtcaacatccagaacttcaccaccagc
tggagagacggcatggccttcaacgctctcatccacaaacacagaccggacctgatcgac
ttcgacaaactgaagaagtccaacgctcactacaacctgcagaacgccttcaacctggca
gagcagcacctgggcctgaccaggctgctggacccagaagacatcagcgtggaccatccc
gatgagaaatccgtcatcacctacgtggtgacgtactaccactacttctccaagatgaag
gcgctgaaggtggagggcaaacgcatcgggaaggtgttggacaacgccatcgagacggag
aatttgatcgagaagtacgagtctctggcctcggctctgctggagtggatcgagcagact
atcatcatcctcaacaacaggaagttcgccaactccctggtgggagtccaacagcagctg
caggccttcaacacctaccgcacggtggagaagccccccaagttcaccgagaagggaaac
ctggaggtcctcctcttcaccatccagagcaagatgagagccaacaaccagaaggtgtac
atgcctcgagagggaaagctcatttcggacatcaacaaggcatgggagcgtctggagaaa
gcggaacatgaacgagagttggctttaaggatggagctgattcgtcaggagaagctagag
caactggccagacgcttcgaccgcaaggcggcgatgagggagacctggctgagcgagaac
cagaggctggtgtcccaggacaactttggtttggatcttcaggccgttgaagcagccacc
aaaaagcacgaggccatcgagactgacatcgcggcatacgaggagcgcgtgcaggccgtg
gtcgctgtgtccaaggagctggagctggagtgctaccatgacatcaagcgcatagcagct
cggaaggacaacgtgctccggctgtgggagtaccttctggagctgctgaaggcccgcaga
cagaggctggagatgaacctgggcctgcagagagtcttccaggagatgctctacatcatg
gactggatggacgaaatgaagatgttgcttctgtcccaggattatgggaaacacctgttg
ggcgtggaggacctcctgcagaaacacgccctggtggaggcggacatcgctatccaggcc
gacagagtgagggccgtctcctgcaacgccaacaagtactctgtcacggacggcggctac
aaaccctgtgacccacgggtcatccaggaccgggtggcccacctggagttctgctaccag
gagctgacacagctggccgctgagcgccgcgcccgcctggaggactcgcgtcgactctgg
aagttcttctgggaaatggccgaagaggagggctggatccgcgagaaggagcagatcctg
tcctcactggagcagggcagggacctgacgggggcggtgcgccttctgagccagcagcgc
gccctagaggatgaaatgagcgggcgcgccggccatctgcagcacaccatcactgagggc
cgggccatggtgcaggtcgggcataatggctcggataagatcctggaaaggatcggcgac
ctgcaggcacagtgggcggagctagagcagcacgccgccgtgacccgcaggaggctggag
gaagctctggccttgcaccagttccaggccgacgcagacgacgtggacgcatggacgctg
gacgcactccgcatcgtttctagcggggagacgggccacaacgaattctccacccaggct
ctggtccggaaacacaaggatgctgccgcagaagtagccagctatcggccggtgatcgac
tccctgcatgagcaggccgccacgctgccaaaggaagaggcggagtcagttcgtggccga
ctggctggaatcgaggagcgctacaaggaggtggcagagctgacgaagctgaggaaggag
gctctgcaggacgctttggcccgccacaaaatgttcagcgaggccaacgcctgccaggtg
tggatcgaggagaaggagcagtggctgaacgccacggaaatcccggaaaagctggaggac
ctggaggtcgtacagcaccggtttgacagtctggagccggagatgaacaaccaggcgtcc
cgcgtggctgtggtgaaccagatcggccggcagctgatgcacgccggttctccaagtgac
gacatcaaggcccagcaggacaagctcaacaataggtggggtctgttccgtgatctgctg
gacctgaagaaagagtccctgaactctgctctgggcgtccagaactaccacctcgactgc
aacgagaccaagtcttggatcaaagagaagaccaaggtgattgagtccactcaggaactg
ggcaatgacctgatgggcgtcttggctctgcagcgcaaactgaccggcatggagcgagac
ctggtcgccattgaagacaagctgggtgaccttcgaggcgaggcccaaaggctggcggag
gagcacccggatcaggccaaggccatcaccggccggctggccgaaatcacagctgtgtgg
gaggagatgaaaaacacgctgaagcgccgggaggagtctctgggggaagcccgcaaactg
cagcagttcctgcgagatctggacgactttcagtcctggctgtctcgtactcagaccgcc
gtggcgtctgaagacatgcccaacacgctggccgaggccgagaaactgatggctcagcac
gacggcatcaagaacgagatcctaaactatgaggaggactaccagaagatgcgggacatg
ggggacatggtgacgcgtggccagacggacgcacagtacatgttcctgcaacagcggctg
caggcgctcgacaccggctggaacgagctgcacaagatgtgggagaacaggcagaatctg
ctgtctcagtcgcatgcttaccagctgttcctgagggacaccaagcaggccgaggccttc
ctcaacaaccaggagtacgttctggcccacgcagaaatgccccccactctggagggggcc
gaggctgccatcaagaaacaggaagacttcatgaccaccatggacgccaacgaagacaag
atcaacggcgtgatggaagcagggcggcggctggccagcgacggaaacatcaacgcggag
aagatcaaggagaaggtggcgtccatcgatgacaggcacaagaaaaacagggaggctgct
gtggagctgctgatgagactgaaggacaaccgggacctgcagaagttcctccaggaatgt
caggagttatctctgtggatcagcgagaagatgctgacggctcaggacatgacctacgac
gaggccaggaacctgcacagcaagtggctgaagcaccaggccttcatggcggagctgcag
tccaacaaggagtggctgaacaagatcgagaaggacgggactttgttggtgtcggagaag
ccggaaacggaggtggtggtgaaggagaagctcacggcgctccactccatgtgggaggag
ctggagtccaccacgcagaccaaagctcagtgtctgtttgacgccaacaagacggagctg
ttcacacagagctgcacggacctggacaagtggttggggggcctggagggtcagatccag
tctgaggactatgggaaagacctgacctccgtcaacattttgctgaaaaagcagcagatg
ctggagaaccaggtggaggtgcgtcagagggaggtggtggagctccagagccaggtgaag
gctctgggtcaggaggccaaggacaccgatgaggtggacgggcggcggcagggggtggag
aagaagttccaggagctgctggagccgctgaggcaccgccgcaacttgctggtggcgtcc
agggaaggtcatcagttcaaccgggacgttgaagacgagatcctgtgggctcaagagcgg
atgcccgtggccacatccaccgaccacggacacaacctgcagacggtgcagctgctcatg
aagaagaaccagacgctggagaaggagcttcaaggccatcagcctcgcatcgacgacatc
ctggagcgcagccagagcctgctccgggaccagacctccggcaccgaggggatccaccgg
cgcctggccgagctgcaggagctgtgggaccggctgagggaggaggggcggcggcgccac
gcccggctccaggaggcccacaaagcccagcagtactactttgatgcagccgaggccgaa
gcctggatgagcgagcaggagctctacatgatgtctgaggagaaggccaaggatgagcag
agcgccatcaccatgctaaagaagcaccagatcatggagcaggcggtggaggactacgcc
gaggtcgtccaccagctgtccaagaccagcagaggcctggtggctaatgaacaccctgag
agcgagcggatcggcatgcggcagtcccaggttgacaagctgtatgccggcctgaaggac
ctgtcagaagaaaggcggggcaaactggaggaaaggctccgcctcttccagctgaaccga
gaggtagacgatctggagcagtggatagcggagcgggaggtggtggccgggtcacacgag
ctgggacaggactacgagcacgtcacgatgttgcaggagcggttccgagagtttgcgcgg
gacacggggaacattgggcaggagcgcgtggacggcgtcaaccacctggcagatgagctg
atcaacgccggacacggggacgccgccacggtggcggagtggaaggacgggctgaacgag
gcctgggccgacctgctggagctcatcgatacccgaacgcagattctggctgcctccttt
gagctgcacaagttttaccacgacggaaaggagatcctggcgcgcatcgcagacaagcag
aagaaactgccggaggaaatgggccgcgaccagaacacggtggagacgctgcagaggatg
cacaccagctttgagcgggacgtccaggcgctcggagctcaggtgaggcagctgcaggaa
gacgccgtccgcctgcagtcttcgtacgccggagacaaggcagacgacatccagcgtaaa
gacggcgaggtcctggaggcctggaggatcctgctggaggcctgcgactcccgcaggtcc
cgcctactggacacgggggaaaggttccgcttcttcagcatggtgcgcgacctgctgctc
tggatggacgacgtgatccggctcatcgaagcccaggagaatcccagagacgtgtcgtct
gtggagctgctgatgaacaaccatcagggcatcaaagccgagatcgacgcgcgcaacgac
agcttctccacctgcgtggagctgggcaaggcgctgctcgcacgcaagcactacgccgcc
gctgagatcaaagaaaagctgctccagctgacagacaaacggaaggagatgattgacaag
tgggaggatcggtgggagtggcttcgcctcatcctggaggtgcatcagttctccagggac
gccggcgtggcggaggcgtggctcctgggccaggagccgtacctgtccagcagggaggtg
ggccaaagcgtggacgaggtggagaagctcatcaagcgccacgaagcctttgagaagtcc
gcggccacctgggaggaacgcttctctgcgctggagagactgaccactctggaactgctg
gaagtccggaggcagcaggaggagatggagcgcaggaggagaccgccctcacctgagcag
ctccaccaggaggaggtgcagcaggagaagagtgttgtgatgcagaatggactcccctca
gacgaagattctccgtggaccgggctggaaggtgggggcctcgtgaacggcctcgtggag
cgcagctccatggagccaagccccgccccctcgccgacgatgaccaagaagaataaacac
agccagtcatccacgctgcccctcaagagccaggactcccccgtgcagatggagggcctc
ctgcaccgcaagcacgagtgggagggacacaacaagaaggcctccaacaggtcgtggcac
aacgtttactgcgtcgtctgccaccaggagatgagtttcttcaaggacagcaaggcggcg
gcgcagggggcggcgtaccacaaccagccccccgtcagcctgaaggacgccacctgcgac
gtcgcctctgactacaagaagaagaaatacgtcttcaagcttagagtcgcagatggaaac
gagtacctgttccaagccaaagacgaggaggaaatgagctcctggatccaggtcatcctg
aacgccgccgcgtctgaactcaccgacacgcagagcagcttccccggcacgccggtgtct
gggcgcgctcagacgctgccggccaccatcacgctgaccaccgagtcgagccccggcaag
aaggagaagcgcttcagcctcttcagcaagaagaagcagtga
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integrated database retrieval system
