Oryzias latipes (Japanese medaka): 101164046
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Entry
101164046 CDS
T02443
Symbol
sbno2
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
101164046 (sbno2)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101164046 (sbno2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
101164046
NCBI-ProteinID:
XP_023809705
LinkDB
All DBs
Position
4:2607883..2676015
Genome browser
AA seq
1558 aa
AA seq
DB search
MPTLTSAPAMDRENYLHPEDSQLDSSMFSVPPSNTESSIYSPWGPSSQNGYSIHGPVQSG
NQQYHLSSNTTNNIPEMPMDLFSDFSDVDFSSLSFQRDGDFSQDLSCFEDPSTNSLFSSP
ADSLSEYADTQPFITTADSVPRLWDVNTSTTTAPAQSHLEQNGFNKFHGLTSLEEINAII
TTPPLGFQTNQPPAEEEEDAEVEETEELGHVDTYAEYKPSKSTIGISHPDIVVETNTLSS
VPPPDIAYTLSIPESTINSGLLSALQLEAIIYACQQHEVILQNNQRAGFLIGDGAGVGKG
RTVAGIILENYLKGRKKALWFSISNDLKFDAERDLKDIDAPNIPVHALNKIKYGDTATSE
GVLFATYSALIGESQAGGQHRTRIKQILDWCRPDFDGVIIFDECHKAKNATSTKMGKAVL
DLQNKLPRARVVYASATGASEPKNMIYMSRLGIWGEGTPFRTFEDFLHAIEKRGVGAMEI
VAMDMKVSGMYIARQLSFSGVSFRIEEIGLDSDFKQVYNKAAKLWAEALQTFMRAADELG
LVSRKSLWGQFWSAHQRFFKYLCIAAKVRCLVELARKELEAGKCIVIGLQSTGESRTKEV
LDENDGHLDRFVSAAEGVFQSLVTKHFPSEKQRREKAPGNKRKLSCLVNQSGKPRGRQPK
MAKPLVDTSGVINISDDSSSDSDGIDTDSNSSPDSLQDNDDVIFVTQTNCQSARIEEMKL
NLLNKIAELGKELPLNTLDVLIDKFGGPDKVSEMTGRKGRVVRRPDGIVRYESRAEQGST
IDHINIKEKDRFMSGEKLVAIISEAASSGISLQADKRVKNQRRRVHMTLELPWSADRAIQ
QFGRTHRSNQVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYN
FENKYGTKALDKITKAILGYIDNKVPPPKGYPEGDAMFFRDMKVGMMDVGIFCKEPRFGI
NTEKDCSITKFLNRILGLEVHKQNYLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGNDE
IYEELQETFLTPGNPQDGQVVLYKISVDRGMPWEEAYSKSLNLSGSDEGFYLSLKLRGSQ
PCVLLAEQGRGKNFIVYKPNIGKQAHPESLEKLMQRYRKVTADEAMDSWKSQFDFSFKKC
SHANWNGKCKKIEEGQECLQGMRLRQYHMLCGALLRVWKRVSDVVSDITKSSILQIVRLK
TKQHNKQVGIKIPETCVSRVREELIQMDKEVKKKREEKQQLKNKHLLENLNSQKFLLNQS
VVSSFPQNSIHKQTLSQNVLQRTQPRRMFQLQGMQTPTQRSPHDVSLLTLQRPPSSPQQR
TPNNWPSNPSSIHSQSSLPNSVNHNVPQFFPPSLIPFQQLSDPAVPLHQPTIPSGLSSQN
PLEDIFDLTMTPPSPSTESTEGRLNLDTLTGNSAEFESDFNFESLMSQTPLSQPLMFPQH
LLSSQQQNQSLLLNSQHPEILSPQMLTKTASPSSSSSSCSSSTSSHSLFSSPPSSSSSSL
YSHPSSCFPSSFLLSQADSVSLSNGHSSSGTLDVREALNSMLQAGPDRQSVIQYRPQD
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccctcacctcagcacctgccatggaccgggagaactatctgcatccagaagac
tctcaactggacagcagcatgttctctgtgcccccgtcaaacacagagagttcaatatat
agcccctggggtccttcttctcaaaatggatacagtatacatggccctgtgcagtctgga
aaccagcaataccacttgagcagcaacactaccaacaacattccagaaatgcctatggac
ctcttctctgatttctcggatgtggacttttctagcctcagcttccaaagagatggagat
ttctctcaggacctgtcctgctttgaagacccctccacaaactctctgttctcttctccg
gctgactctctgtcagagtatgctgatacccagccgttcatcaccacggccgactcggtc
cccaggctctgggacgtcaacactagtaccaccactgcaccagcacagagccatttagag
cagaatggcttcaacaagtttcacggcttgaccagtttggaagaaataaatgctattatc
accactccacctttaggattccagacaaaccagccaccagcagaagaggaggaggatgct
gaggtggaggagacagaggaactcggacatgttgacacgtatgctgagtacaaaccctct
aaatccactataggaatttctcatcctgacatagtggtggaaaccaacacactgtccagt
gtccctcctcctgacatcgcatacaccctgtctatacctgagtcgaccattaacagtggc
ctgctgtctgctctgcagttggaggccatcatctatgcctgccagcaacatgaggtgata
cttcagaacaaccagcgagcggggttcctcataggagatggggcgggcgttggaaagggg
cgcactgtggcaggaatcattcttgaaaactacctaaaagggcggaaaaaagcactgtgg
ttcagcatatccaatgatctgaaatttgatgcagagagagatctcaaagacatagacgca
ccaaatattcctgtccatgccttgaacaagataaagtatggagacacagctacctcagaa
ggagtcctgtttgccacttactctgcgctgataggagagagccaagcaggggggcagcat
cgcacaagaattaagcagatcctcgactggtgcaggccagactttgacggagttattatt
tttgatgaatgccacaaggccaagaatgcaacgtctacaaagatggggaaggcagtgctc
gacctgcagaacaagctgccacgagccagagtcgtgtacgccagtgcgacaggtgcctct
gagccaaagaacatgatctatatgagtcgcctggggatttggggagagggcacacccttc
agaacctttgaagacttcctgcatgccattgagaagagaggtgttggtgcaatggagatt
gtcgccatggacatgaaagtgagcgggatgtatatcgccagacagctgagcttctcaggt
gtgtcgttccggattgaagagatcggtctggacagcgactttaagcaggtttacaacaag
gctgctaaactgtgggcggaggctctgcaaacgttcatgcgagcagctgacgagctgggt
ctggtcagcaggaagtctctgtgggggcagttctggtcagctcaccagcgcttcttcaag
tatctctgcattgctgccaaggtccgctgcctggtggagctggcccgaaaggagctggag
gcaggaaagtgcattgtcattgggctgcagtctacaggagagtcacgcaccaaagaggtt
ttggatgagaacgacgggcatctggaccgatttgtctctgcagcagagggagtcttccag
tctcttgtaacaaagcatttcccctctgagaaacaaaggagggagaaagccccggggaat
aagagaaaactatcttgtcttgtaaaccaatcaggcaaaccaagaggtcgtcagcctaag
atggccaagccgcttgtggacacgagcggcgtgatcaacataagtgatgacagtagcagt
gattctgacggcatagacactgactccaactcctccccagattccctgcaggacaatgac
gacgtcatctttgtcacccaaaccaactgccagtctgccaggatagaagagatgaagctg
aaccttctaaacaaaatagcagaactgggaaaagaactacctctcaataccttggatgtg
ctaattgataaatttggaggaccagacaaagtctctgagatgactggtcgtaagggtcgc
gtggtgagacgtcccgatggaatcgtccgttacgagtcgagggctgaacagggatccaca
attgaccacatcaacatcaaggagaaggaccgcttcatgagtggagagaagttggtggcc
atcatctctgaggcggccagctctgggatttccctgcaggcagacaagcgagtgaagaat
cagaggcgcagggtccacatgactctggagctgccttggagtgcagaccgggcaattcag
cagtttggtcgaactcatcggtccaaccaggtgacagcgccggagtacatcttcctcatc
tctgagctggcaggagagaggcggttcgcttccattgtggctaaaaggctggagagctta
ggtgcattgacccacggagacagaagagcaacggagtccagagatctgagcaagtacaat
tttgagaacaagtatggtacaaaggctttagataaaatcaccaaagctattctcggatac
atagataacaaggtgccccctcccaaagggtaccctgagggggatgccatgttcttcaga
gacatgaaggtgggaatgatggatgtgggcattttctgtaaggaacctcgctttggaatc
aatacagagaaagattgcagcatcaccaagttcctgaaccgcatcctgggcctggaagtt
cataagcagaattatcttttccaatacttcactgataactttgattacctgattgaaaaa
gacaagaaggaaggaaagtacgacatgggaatcctagatctcgccccaggaaacgatgaa
atttatgaggagctgcaggaaaccttcctgacacctggaaatccccaggatggacaggtt
gttctttataagatcagtgtggacagaggtatgccctgggaagaggcgtacagtaaatcg
ctcaatctcagtggaagtgatgagggattctatctttccctgaagctgcgaggtagccaa
ccatgtgtgctgctggctgagcaaggcagagggaagaacttcatcgtctacaagcccaac
attggcaagcaggcccatcctgagagcctggaaaagctgatgcaacgataccgaaaggtc
actgctgacgaagcaatggatagctggaagagccagttcgacttctcttttaagaagtgc
agtcatgctaactggaacgggaagtgtaagaaaatcgaggaaggtcaggagtgtctgcag
ggcatgcgcctgcgtcagtaccacatgctgtgtggagctttgttacgggtgtggaagcgg
gtgtccgatgtggtgtcggacatcacaaagtccagcatcctgcagattgtgcgtcttaaa
actaagcagcataacaagcaagttggcatcaagatcccagagacctgtgtgtcccgtgtg
cgtgaggagctgattcaaatggacaaagaggtgaagaagaagcgagaggagaagcagcag
ctgaagaacaagcatctcctggaaaacctgaacagtcagaagttcctgctgaaccagtcg
gttgtttccagtttccctcagaactccatccacaaacagacgctcagtcagaacgtttta
cagcggactcagcccagacgcatgtttcagctgcagggcatgcagacgcccacccaacgc
tccccacatgacgtatccctgttgaccctacagaggcctcccagcagcccccaacaaagg
acccccaacaactggcccagcaatccctccagcatccatagccagagttccctgcccaac
tcggttaaccacaacgttccccagttttttcctccatctttaatcccttttcagcagctc
agtgacccagctgtgccgctccatcagcccacaataccctccggcctgtcttcccaaaat
cccctggaggacatttttgatctgaccatgaccccgccttcgccctctacagagagcaca
gaggggcgtctgaatctggacaccctcacgggcaactctgcagagtttgagagcgacttt
aactttgagtctctgatgtcccagactccgctcagccagcctctgatgtttccacagcac
ctcctctcgtcccagcagcagaaccagagcctgctcctcaacagccaacacccggaaatt
ctgtccccacagatgctgacaaagacggccagcccttcgtcctcgtcctcctcctgttct
tcctccacatcgtcacacagcctcttctccagcccaccatcttcctcctcttcttccctg
tattcccatccttcttcctgcttcccttcatcgtttcttctttcccaagctgactctgtg
tctctaagtaatggacacagcagctcggggacgctggacgttcgggaggctttgaacagc
atgctgcaagctggacctgaccgtcagtctgtcattcagtaccgcccgcaggactga
DBGET
integrated database retrieval system
