Oryzias latipes (Japanese medaka): 101164207
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Entry
101164207 CDS
T02443
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101164207
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
101164207
Cell adhesion molecules [BR:
ola04515
]
Immunoglobulin superfamily
L1 family
101164207
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
BiPBP_C
V-set_CD47
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
101164207
NCBI-ProteinID:
XP_023812528
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Position
7:20462019..20477817
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AA seq
1180 aa
AA seq
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MMRLVGPGLLLLLWHSAWSLDIPLDVRQPPTIIKQSLKDHIVDPKDTMVIECEAIGNPHP
TFSWRRDGKYFNVARDSQVSMRRRSGTLEIYARNNPEKYEAVYQCIASNQYGSAYTHKIN
LQMYRPPVWPREPLEPVVISAGLPLVLPCESPAGPPKPETYWMSSCSYARPFNWPIQTAF
PTMQPVRQDRRVSMGINGDLYFSNVLFNDSVVDYCCNARFPHKNAIQQKTPVVVKVLSTR
SIAEAAPTWLSPKGSSSSKLVLQGEELLLECIAAGVPTPHIAWTKDGDELAVTPSMKIKN
FNKMIQIPKAAFEDAGEYTCSATNKIGYIEHTISVIVKAAPFWVEKPTNLILAPEETGRL
VCRSDGVPRPTISWFMNGDPIEDAMQQSNRLVAGDTITLRSVTAENTAVYQCNASNQYGY
LLANAFVNVLHSTPRIIGPRNEVVKVIEGSRTFLDCRFFGSPVPDLRWSKYGQGNLEGTR
FKTHSNGTLEVKRIQLQDEGTYVCVISNIAGRDENQVRVEVKEPIVIVTKPQSMKVIRGS
DVRLECAVKADATTPFTTSWIKNKKQVTFGWRVSLDESNLVITDVNRGDEGNYTCVFKNE
LDQKSASAHLLVMDRPNPPTNLELSDPFERSVRLSWVPGDSNHSPITDYLVQYDDDDWLP
GKWRNLSTYPGNLNSVILHLTPFTYYEFRVIAINAIGASRPSRSSARFQTSGAPPDVIPK
NVKGVGTWRNNMEISWEPLTYREWNGPHLKYLVWWRRRDSREEWKNATTKWLRYYIYDAD
TFTPYEIKVQAVNDFGLGPESPVVIGYSGEDRPLAAPLNLRISDIESTQVTVHWDPVSRE
NIMGELKEYKVYYWRDSSQLRWLWVNRGMKSKIFPNNDPEPSGVITDLIPYSNYKMYIVV
ANSRFEGPPSNNIHFSTPEGVPSAPTSFRIQQRHLDSIYVDWDLPAEPNGIITGYSLKYH
TLNATRGEEMRVEEFPPNVTSFSIRRYDRYTRYWFSVAARTRIGIGEWHTEESPHYTTET
YAQDQVDITTQGWFIGIMCAVALIVLILLIVCFIKRSRGGKYPVREKKDISLEPVDDKDQ
EGSFDYRSLERIAHISTLPFPRRHIEEERLQRAQPAVEAMMKRVDSDDSLVEYGEGGEMQ
FEEDGSFIGQYTGTRRDVRDLDFSGGLELQSPMNTIYSLA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggctggttggaccagggctgctgttgctactatggcacagtgcttggtctctg
gatattccactcgatgtcagacagcctccaacaattataaagcagtccttaaaggaccat
attgtggaccccaaagatacaatggtcatagagtgtgaagctataggcaacccgcatcct
actttctcatggaggcgtgatggaaaatatttcaatgtggcgcgtgactcccaggtgtcg
atgcgcaggcgctcaggaactctagaaatctatgcccgaaataatccagaaaagtatgaa
gcagtgtaccagtgtattgcctccaatcagtatggatctgcgtacacccacaagatcaac
ctacaaatgtacagacctccagtatggccacgggagcctctggagcctgtagtcatcagc
gcaggtttgcccctggttctgccatgtgagtccccggcaggtccacctaaacctgaaacc
tactggatgtccagctgttcatatgcacggccgttcaactggcccattcagacggctttc
cccaccatgcagcctgtgcggcaggaccgcagggtttcaatgggaatcaatggagatctg
tatttctccaatgtgttgtttaatgactctgttgttgattactgctgtaatgctcgcttc
cctcacaagaatgcaattcaacagaagacacctgtggttgttaaagtgctttcaactcgc
tccattgctgaggctgcccccacctggttgtctcctaagggctcgtccagctccaaactg
gtcctgcaaggggaggagctgctcctggagtgtatagctgctggagtgccaactcctcat
attgcctggacaaaggatggagacgagcttgcagtgacgcccagtatgaaaataaagaat
ttcaacaaaatgattcagatcccaaaggcagcttttgaagatgcaggagaatacacctgc
tctgcaaccaacaagataggttacattgagcacacaatatctgtcatagtcaaagcggct
ccattctgggtagaaaaacccacaaatttgattctggcacctgaagaaaccgggcggctg
gtgtgccgttctgatggggttcctcgtcccaccatcagctggttcatgaatggggaccca
attgaggatgcaatgcaacagtccaacagactggtggctggggatactataactttgcgc
agtgtgactgcagaaaatactgctgtctaccagtgcaacgcctccaatcagtatgggtac
ctactggccaatgcatttgtcaacgtactacattcaactcctcgcatcattgggcctaga
aatgaagttgtcaaagtgatagagggaagtcgaacgtttttagactgtcgcttctttggt
tctcctgtgcctgacctgcgatggtcaaaatatggacaaggcaatcttgagggaactcga
ttcaagactcacagtaatggaactcttgaggtcaaacggatacaactacaagatgaggga
acttacgtgtgtgtcatcagcaacattgcaggacgagatgagaaccaagtccgagtggag
gtcaaagagcccatagtaatagtcaccaaaccacagagtatgaaggtaatccgaggaagt
gatgtgcgccttgagtgtgctgtcaaagcagatgccactactccattcacaacatcatgg
ataaaaaacaaaaagcaagtcacttttggctggagagtttctctggatgaatcaaatcta
gtcattactgatgtgaacagaggagatgagggcaattacacctgtgtctttaagaatgag
ctggaccagaagtctgcctctgcacacctactggtgatggatcgtcctaatcctccaact
aacctggagttgtctgatccatttgaacgcagtgtacgactcagttgggtacctggtgac
agcaaccatagcccaattacagattacttggtgcagtatgatgatgatgactggcttcct
ggaaaatggcgaaatctgtctacatacccagggaatcttaactctgttatcctacatctc
acaccatttacctattatgagttcagagttattgcaattaacgctattggagccagtcgt
ccaagtcgttcatcagctcgtttccagaccagtggtgcacccccagatgtcatcccaaag
aatgtgaaaggtgtgggcacatggagaaataacatggaaattagctgggagcctctgact
tacagagagtggaacggaccacacttgaagtatctggtgtggtggagaaggagagattct
agagaagagtggaagaatgcaaccacaaagtggctgagatactacatctatgatgcagac
accttcaccccttatgagatcaaagtccaggctgtcaatgactttgggctgggcccagag
tcccctgttgtcattggttattctggtgaagaccgccctttggcagcacctttaaatctg
agaatttctgacattgaaagtactcaggtcactgtgcactgggacccagtgtcacgagag
aacatcatgggggaactaaaagagtacaaggtctactactggagagacagcagtcagttg
cggtggctatgggtcaacagaggaatgaagtccaaaatattcccaaacaatgatccggaa
ccatctggagtcatcacagacctcataccctacagcaactataaaatgtacatagtggtg
gctaacagtagatttgaagggccgccgagtaacaatatacacttttcaacacctgaagga
gtaccatccgcccccacatcctttagaatccaacaacgccatctggacagtatttatgtg
gactgggatctgccagcggagcccaacgggatcatcactggatactctctgaagtatcac
acattgaacgctaccagaggagaggagatgagagttgaggagttcccacctaatgtgaca
agcttctccatccgccggtatgaccgatacactcgctactggttctctgtggcagcccga
actcggattggaattggagagtggcatacggaggagtcgccccattacaccacagaaacg
tacgctcaggaccaggtggacatcacaacacaaggctggttcattgggataatgtgtgct
gtggctctcatcgtgctcatcctcctcatagtctgctttatcaagagaagtcgaggcggg
aaatacccagttcgagagaaaaaggacatttcactggagcctgtagatgacaaagatcag
gaaggttcatttgactatcgatcccttgaaaggatagcacatatctccacgctgcctttt
cctcggaggcacatagaggaggagaggcttcaaagagcccagccagctgtggaagccatg
atgaaacgcgtagacagtgacgacagtctggtggaatatggagaaggaggggagatgcag
tttgaagaggatggctcctttatcggacagtacacaggaaccaggcgagatgtcagagac
ttggatttcagtggaggtctggagctccagtctccaatgaatactatatactcccttgca
tga
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