Oryzias latipes (Japanese medaka): 101164240
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Entry
101164240 CDS
T02443
Symbol
sptbn4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04517
IgSF CAM signaling
ola04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101164240 (sptbn4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101164240 (sptbn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ola04812
]
101164240 (sptbn4)
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
101164240 (sptbn4)
Intermediate filaments
Intermediate filament-binding proteins
101164240 (sptbn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SLATT_6
PH_20
Motif
Other DBs
NCBI-GeneID:
101164240
NCBI-ProteinID:
XP_023817834
LinkDB
All DBs
Position
13:complement(4255407..4351712)
Genome browser
AA seq
2683 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPNSSGFWEAECTSSKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVNCRISDLYNDLKDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIATEDNRETRSAKDALLL
WCQMKTAGYSEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNVA
EQHLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLDKCIEAE
KVISRYEALASDLLDWIEKTIAIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHEGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
VELAAEMEVEGYYDIRRILARKENILGQWSLLKELVAGRRARLEQNLALQKTFQDMVYMI
DWMEDAQAQLLSKDFGKHLLEVDDLLQKHSLQEADISVQAERVETLNAAALKFTTMEGYQ
PCDPQIICNRVNHVSSCLEDLKHLAADRRSELEESRQLWAFFQELEESEAWIREKSSILA
SQGFGRDLSSVLKLLQKHKTLAGELLAHRSLLQNTMKRGKQILSEKSFGTTGIQERILEV
KDEWKKLEDQAAQHLSHLQEALTFFQFSTEMDDLVAWLQDAYRLVSSEDFGHDEYSTQSL
LKKHRGVTEAIDKHRLHVVALRKHMGVLPLQYREQEEVQVRMAEVEQLYTEVADVAVLRQ
QWLHDALAVYHMFSEVNACELWIDEREQWLDKMEIPEKLEDVEVVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGGHPSSAEVRGCQDHLNSRWNSIVELVEQKKDQLDSMLRLQNYLL
ECAEIKSQIQEKKKAIDATQYMGSDLGGVLALQRRLSTMEGALAVLEPKLLHLQEEAEHL
ATAHSGRAMEILVPFDGISVEWEELKQTLQGCEDSLMVASRLQSFIQDLDSFLTWLVQTQ
TAAASDQLPNDLEEAEKLINKHAALKEEIGRYEEDYERLQAMNELLESEDAPLPQAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPTTVE
TVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQNNIYSDRIRERIDTLAKRGNQNRH
LAQKWLEKLNDQWELQRLLQDCHELGDWVNEKMLMARDSSRDETQNLHKKWLKHQAFMAE
LAQNKEWLDKIEKEGQKLIQEKPELSPVVRRKLEEIRECWQDLESTTQAKARQLFEANKA
DLLVQSYESLHQRLGQLEGQLAYVDQGQDLTTVNKQLKKLQTLEGQMEEWYQEVGQLQAQ
AASIPQQTPVKQTVAERQTAVETRMLRLIEPLKERRRILLASKEVHQVGRDLEDEILWVQ
ERLPLATSQEHGSTLQAVQQLMKKNQSLQRELQSHRSRMEEVLEQAGIIASIRSPAADCI
RAGQDQLAQLWALLWTETERRQLLLDTMYQVQQYYLDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLVLEQTIEDYAETIGLLSQQCRQLLEMGHPESEQISKRQSQIDRLYVSL
KDLVEERKSRLEQQYWLYQLNREVDELEQWIAQREVVASSPELGQDFEHVTVLQEKFTEF
ASETGSVGQERVTAINQMVDELIDYGHSEAATIAEWKDGVNESWADLLELMETRAQMLAA
SHQLHKFFSDCREVLAQIQDKQKRLPEVRARQGSTSNTSTLQRLLHSFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKADAIACCEHEVMHSWKELLTSCEECRLQITTETDKLRFFSMVR
DQIMWMDSILCQIGTGEKPRDVSSVEVLMNDHQSLKSEVEARSQSVLECIEMGKMLLAAR
NPAAEEIKEKLDKVIAKQRELTEKWDKHWEFLKQLLEVHQFAQEAVVAEAWLTAHEPFIN
SKELGESVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKLKAEQGKLPSTPLLGRK
VFLDPQDALASPSTLPRLPVSPVIRQTIYEQNEASSPPSPSPATPTPSPSSAARRLGSTV
ANYTPVMNSSGYRHTLEVQHGGVVGVAAGLGQPAASSIASVATAAMLVSANQARESAGSL
RDQAAKVMSHLQPVQAGRDLEARSSPYLRQPKIKHLDDAVTPLIVASRLEKVRERGRERD
TMTGETGADRPEVAVMAEVVLQERGRERLHSEPTRGSRGSRPDPMGHAEPQAQTHLQQRG
HRMERQLSSEQLIQARRDELPQEVWREQAERRDRRTLERQTSSEHEGHGGHEGRRRERDR
HRLDRQDSSEHDTGREQSDRRSGGGEKRTTMADIVEQLQEREAAQARGEVPRLPNGFPEK
TSRPDRPRARDRPKPRRRPRPKEPGETTRRSRSAPAQSSPAVPQPPTHTAHHEGFLFRKL
DIESLKKSTNSRSWVNLYCVLNKGELGFYKDAKNTTTPYNNEPMLSLSHCQCDVTNGYKK
KKNVFTLKTKDGSEFLFHAKDEDDLKTWVTNITASISEHEEIAKWGQPQPTTSSTDEGTR
RDGGSKADNRSERGAEKEKERGERSEKSERGGKSDVKRSGKKK
NT seq
8052 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcctccccagacctggacaacgcagaagcccagcgccagctcaacaacaac
aacagaccaaacagctcgggattctgggaggctgagtgtacgagctccaagctgtttgaa
tgctcccgcatcaaggccctcgcagatgaaagagatgcagtccagaagaagacttttact
aagtgggtcaactctcatttggccagagtgaactgtcgcatatctgacctctacaacgac
ctgaaggatggctacatgctcaccagactgctggaggtcctcagtggagagttgctgcca
agacccacgcgaggccgcatgcggatccactgcctggagaacgtggacaaagccctgcag
tttctcaaagagcagagggttcacctggaaaacgtgggctcccacgacatcgtggatgga
aaccaccgcctcaccttgggcctcatctggactatcatcctgcgcttccagatccaagtg
atcaaaattgcgacagaggacaacagagagacccgctccgccaaggatgcgctgctgctt
tggtgccagatgaagactgcagggtactctgaggtcaacatccagaacttcaccacctgc
tggagagatggcctggcttttaacgccctcattcacagacaccgacccgacctaatagag
ttccacaagctgacgcgctccaatgcaacccacaacctgcagcaagccttcaacgttgct
gagcagcacctgggcctcaccaaactgctggacccagaggatgtgaacacagagaatcca
gatgagaagtccatcattacttatgtggtctcctactaccactacttctccaagatgaag
gctcttattgttgaggggaagagagttggcaaggttcttgataaatgcatagaggcggaa
aaggtcatcagccgctacgaggctttggcctcagacctgctggactggatcgagaagacc
atcgcaatcatcagcaaccagaagtttgccaactcgctgactggagtgcagcagcagctg
caggctttcaccacatactgcactatagagaagcccatcaagttccaggaaaaggggaat
cttgaggtccttctcttcaccatccaaagcaaactcagagccaacaaccagaaaccgtat
gtgcctcatgaagggaagctgatctctgacatcaacaaggcatgggagagactggagaag
gcggagcatgagaggggcgtggctctgcgcaaagagctgattcgccaggagaagcttgaa
cttttggctcaacgttttgatcacaaaaccaccatgaggcaagcgtggctcaacgagaac
cagaggctggtgtcgcaggacaatttcggctacgatctgccggcagtcgaagccgccatg
aagaagcacgaggccattgaggctgacatcgcctcgtatgaagagcggatcggtgtggtc
gtggagctcgccgcagagatggaagtggaggggtactacgacattcggcgtatcctggca
cgcaaagagaacatcctgggccagtggagtctgctgaaggagctggtggctggcaggagg
gcccggctggaacagaacctggccctgcagaagaccttccaggacatggtgtacatgatc
gactggatggaggacgcacaggctcagctgttgtccaaggactttgggaagcatctcctg
gaggtggatgacctcctgcagaaacacagccttcaggaggccgacatctccgtccaggct
gaaagagtggagacgctcaacgccgcggcgctcaagttcaccaccatggagggttaccag
ccatgcgacccgcagatcatctgtaaccgcgtcaaccacgtctcttcctgcctggaggac
ctgaaacatctggctgccgacagacgctctgagctcgaggagtccagacaactctgggcc
ttctttcaggagctggaagaatcggaagcatggatccgtgagaagagctccatcctggcc
tctcagggcttcggcagagacctgagcagcgttctgaagttacttcagaaacacaagact
ctggccggagagctgctggctcaccgttcgctgctgcagaacaccatgaagcgagggaag
cagattctgagcgagaagagctttggcacgaccggcatccaggagcgaatcctggaggtc
aaagacgagtggaagaagctggaggaccaggccgcgcagcacctcagccacctgcaggag
gcgctcaccttcttccagttttccacagaaatggacgacctggtggcctggctgcaggac
gcttaccgcctagtctccagcgaggattttggtcacgatgagtactccacgcagtcgctg
ctgaaaaagcacagaggggtcaccgaggccatcgacaaacatcgcctccatgtggtggcg
ctgcgcaaacacatgggggttctgcctctgcagtaccgggagcaggaggaggtgcaggtg
cgcatggcggaggtggagcagctgtacacagaggtagctgatgtggccgtgctccgacag
cagtggcttcacgacgcgctcgccgtctaccacatgttcagcgaggttaacgcctgcgag
ctgtggatcgacgagagggagcagtggctggacaagatggagatcccggagaaactggag
gacgtggaggtggtggcacacaggtttgagagcctggaccaggagatgaacagcctgatg
ggacggatcctggatgttaaccagatcgtccagcagctcctggatggaggtcacccatcc
tctgcagaagtcagggggtgtcaggaccacctcaactccaggtggaacagcatcgtggag
ctggtggagcagaagaaagaccagctggactccatgctgcgtctgcagaattacctgctg
gagtgcgctgagatcaagtcccagatccaggagaagaagaaagccatcgacgccactcag
tacatgggcagtgacttaggaggggtcctcgctctgcagaggcgtctgtccaccatggaa
ggagccttggccgtcctggagcccaaactcctacatctacaggaggaggcggagcatctg
gccacagcgcattcaggccgagccatggagatcctcgtaccctttgacggcatcagtgtg
gagtgggaggagctaaagcagactctgcagggttgtgaggactcactgatggtggccagc
aggctgcagagcttcatacaggacctggactcctttctcacctggctggtccagactcag
acggctgctgcctccgaccagctgcccaacgacctggaagaggcagagaaactcatcaac
aaacacgctgctctcaaggaggagataggacgatacgaggaagactatgagcggcttcag
gccatgaatgagctgctggagtctgaggatgctcctctgcctcaagctgctctgcagcag
tggctccagaagctggatgtgggctggaacaagctcctggagatgtgggaaagcaggaga
gaagttctggtccaggcccacatttttcatctgttccttcgagacgtcaaacaggcagag
tccttcctcaacaaccaggagtcagccctcgctcatgtggagctccccaccaccgtggaa
acggtggaagctgccattaaaaaacacaaggacttcaccaccaccatggagctgaacctc
cacaggatcaaagccgtgatcgaggcaggagaaagcctgatcagccagaacaacatctac
tctgatcgcatcagggagcgcatcgacacgctggccaagagggggaaccagaacagacac
ctggcccaaaagtggctggaaaagttgaatgaccagtgggagctgcagaggcttctccag
gattgtcatgagctgggcgactgggtgaacgagaagatgctgatggcgagggacagcagc
cgagacgagacccaaaatcttcataagaagtggctgaagcaccaggccttcatggcagag
ctggcccaaaacaaggaatggctggacaaaatagaaaaggagggtcagaagctgatccag
gagaagccggagctgagcccggtggtccggaggaagctggaggagatccgggagtgctgg
caggacctggagagcaccactcaggccaaagctcgccagctcttcgaagccaacaaggca
gacctgctggtgcagagttacgaaagcctccaccagagactgggacagctagaaggtcag
ctggcctacgtggaccagggtcaggacctcaccacagtcaacaagcagctcaagaaactg
cagactctggaaggccaaatggaggagtggtatcaggaggtgggccagcttcaggcgcag
gcagcctccatcccgcagcagacgccggtcaagcagacggttgccgagcgacagaccgcc
gtagagaccaggatgttgcgtttgatcgaacctcttaaagagagacgacgaattcttctg
gcgtcaaaggaagttcaccaagttggacgagacttggaggatgagattctgtgggtgcag
gagcgcctcccgctggccacgtctcaggagcacgggtccactctgcaggccgtccagcag
ctcatgaagaagaaccagtccctccagagggagctgcagagccaccgtagcaggatggag
gaggtcctggaacaggcggggatcatcgcctccatccgaagccccgcggcagactgcatc
cgggccggccaggatcagctggcccagctgtgggcgctgctctggaccgagacggagagg
aggcagctgctcctggacaccatgtaccaagtgcagcagtattacctggacacggcggag
gtggaggcctggctgagcgagcaggagctgcacatgatgaacgaggagaagggaaaggac
gaacccagcactctgcagctgctgaagaaacatttggtcctggagcaaaccattgaggac
tacgcagagaccattggcctgctgtcacagcagtgccgccagctgctggagatgggacac
cccgaaagcgaacagatcagcaagcggcagtcgcagatcgaccgtctgtacgtgtctctg
aaggacctggtggaggagaggaagagccggctggagcagcagtactggctctaccagctc
aacagggaggtggatgagctggagcagtggatcgctcagagagaagtggtcgccagttcg
cctgaacttggtcaagactttgagcacgtgactgtcctgcaggagaagttcacagagttt
gcgtcggaaacaggaagtgtggggcaggaacgagtcacggccatcaatcagatggtggat
gagctcatcgactacggacactcggaggcggccacaatagccgagtggaaagacggggtg
aacgagtcctgggccgacctgctggagctcatggagactcgtgcgcagatgctggcggcc
tcacaccagctgcacaagttcttctcagactgcagagaggttttggctcagattcaggac
aaacaaaagaggctgccggaggttcgagctcggcagggcagcacttcaaacaccagcacc
ctgcagagactcctgcacagcttcgagcaggacatccagctgctggtcacacaggtgcgt
cagctgcaggagagcgccgcccagctgagaacggtgtacgcgggcgagaaggccgacgcc
atcgcctgctgcgagcacgaggtgatgcacagctggaaggagctgctgacgtcctgcgag
gagtgtcgcctgcagatcaccaccgagacggacaagctgcgcttcttcagcatggtccgg
gaccagatcatgtggatggactccatcctctgccagataggcacaggagaaaaaccccgg
gacgtgtcctcagtggaggtccttatgaacgatcaccaaagcctgaagagcgaagtggaa
gctcgcagccagagcgtcctggagtgtatcgagatgggaaagatgctgctggctgctcgg
aaccccgccgctgaggagatcaaggagaagctggacaaggtcatcgccaagcagcgtgag
ctcacggagaagtgggacaagcactgggagttcctgaagcaactgttggaggttcaccag
ttcgctcaggaggcggtggtggcggaggcgtggctgacggcccacgagccgttcatcaac
agcaaagagctcggtgagagcgtggacgaggtggagcagctcatccggcgccacgaggcc
tttcgcaaagctgccgccacctgggaggagcgattcagctcactgcggcgcctcaccacg
gtggagaagctaaaggcggagcaaggtaaactgccctccacccctctgctgggccgaaaa
gtcttcctcgacccccaagatgctttagccagtccctcaaccctccctcgcctccccgtc
tcccccgtcataagacagaccatctatgaacagaacgaagccagctctccaccctcacct
tcacctgccactcccaccccctccccttcatctgcagcgcggcggctggggtcgaccgtc
gccaactacacccctgtgatgaacagctccggttaccgccacaccctggaggtccagcat
ggcggcgtggtgggcgtggctgcgggactcggtcagccagctgcctcatccatcgcatcc
gttgccacggcagccatgttagtgtcggccaatcaggcacgagaatctgccggcagcttg
agagatcaggccgccaaggtaatgagtcacctccaaccggtccaggcagggcgggatctg
gaggccaggtcgtccccgtatctacggcaacccaaaatcaaacacttggatgacgcggtg
acgccgctgatcgtggccagccggctggagaaagtgagggagaggggaagggagcgggac
accatgacaggggagacgggggcagataggccggaggtggcagtgatggctgaggtggtg
ctccaggagcgcggccgggagcgcctgcacagtgagcccaccagggggtcccggggatcc
agacctgaccccatgggccacgctgagccgcaggcccaaacgcacttacagcagcgaggc
cacaggatggagcggcagctgtccagtgagcagctgatccaagcccggcgggatgaactt
cctcaggaggtttggagggaacaggcggagcgccgcgacagacgcacactagagaggcaa
acgtcgagcgagcacgagggccacgggggccacgagggccggcggagggagagagaccgc
caccgactggacagacaggactccagtgagcacgacaccgggagggaacagtcagacagg
cgctccggaggaggagaaaagagaaccaccatggcagatattgtagagcagctgcaagaa
agagaggcagcacaggctcgcggcgaggtcccccgcctgcccaatggtttcccagagaag
acttcccgtccagaccggcctcgagcgcgggacagacccaagcccagacgaaggccgcga
cccaaagagccaggagagaccacgcggcggtctaggtccgcgccagcccagagcagcccg
gcggtcccgcagcctccaacgcacacagcacaccatgaggggttcctcttccgcaagctg
gacatcgagagcctgaagaagagtacaaacagcagatcgtgggtcaacctgtactgtgtg
ctgaacaagggggagctgggattctacaaggacgccaagaacacgacgacgccctacaac
aacgagccgatgctcagcctctcccactgccagtgcgacgtcaccaacggctacaagaag
aagaagaacgtcttcaccctgaagacgaaggatggcagtgagtttctgtttcatgcgaaa
gatgaggacgacctgaagacgtgggtgaccaacatcaccgccagtatttcagagcacgag
gagattgccaaatggggtcagccccaaccaactacctcatccaccgacgaggggacgcgg
cgagacggcggcagcaaggcggataacaggtcggagcggggggccgagaaagagaaagaa
agaggagaacggtcagagaagtctgagcgaggcgggaagtcggacgtaaaacgctctggt
aagaagaagtga
DBGET
integrated database retrieval system
