Oryzias latipes (Japanese medaka): 101164259
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Entry
101164259 CDS
T02443
Symbol
rab11fip3
Name
(RefSeq) rab11 family-interacting protein 3 isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101164259 (rab11fip3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101164259 (rab11fip3)
Membrane trafficking [BR:
ola04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
101164259 (rab11fip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
101164259
NCBI-ProteinID:
XP_004080571
UniProt:
A0A3B3HMH6
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Position
19:complement(9028431..9051859)
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AA seq
1100 aa
AA seq
DB search
MEATVLSGPLGHTQWESEQPFPLGFPILDSDNGAVLCQNKSDQTGLDFRKSDQNETVLLN
GEEKRFVDKPVELGNLINGATFSSEDLKFDGGHLTYSDSSHRSARFNELSCREAGEGFGE
IADYTLSWFLSPDFADVIGKTSACQESTFTQDPTVEGSDGEPAELASLSAPFSPFEASNC
DREINTTDPFLIVDLLSDENPCLTQKLSHELIPQGFGEKLIDLSFEEQEDLPPSLTGEMV
SPDTRHKGLFPDQVTDLPISSSSPAAQGLLESNQLLNNISQSQEGFEGSVPLLDLKVPHF
ESDVSLCPPAVACTGALETPTKESEVAQTIAVKILPEQQGENDILNLDLSDSSSFLTRPP
AEDASTHGNLTSERIFVENLPKAVMEVKEEHAGEDTTELYLSWTVEEAHKDDSWDLEPQD
IVHNRASISPKTEQNEDETLKDNNQLENAHSHNEVSLDFLAQNTKISSSEAEWTSGPPVV
TVSLSKMVEDDSLPMVSSVNKREEDASPLKDVFDALDQDGDGFVRIEEFMEFAAAYGADQ
VKDLTKFLDPSGLGVISFEDFHRGISAISGSPETQLYSVNYSPGDGAVGCQEEYDEQNEV
TDSAYLGSESTYSECETFTDEDTGALVPPEMHEDVETDSGIEATLHDPEDGGNGFSMNSD
LHNTSLVTVIGGEEEHFEDFGESNNSELPESNEEDSVVHLDSPLSEPPVQVDGSSVLSPS
APASLPDCFQSFLREEALDFFCSQCHKQISRLEDLSTRLNFLEMTSSGKRLSSKKVARHL
LQNSSMTLDTMSDLTRDILELADNDITDKVLLLERRVAELEKESDASGEQHTRLRQENLQ
LVHRANALEEQLKEQEVYAEEQLQQENRRHKEAISKLEREKGLELENLQARLQQLDEENS
ELRSCVPCLRANIERLEEEKRKLHDEAEVMSQRLEEETEARRKMADKLSHERHQNQKEKE
STQELIEDLRKQLEHLQLYKLEAEAKRGRTPGAGLQEYQTRTREAELEQEIKRLKQDNRT
LKEQNDELNGQIINLSIQGAKNLMSASFSDSLAAEINSVSRVELMETVHKQEEINYRLQD
YIDKIIVAIMECNPSILEVK
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atggaagccacagtcctgtctggccctttggggcacacacagtgggagtcagagcagcct
tttcctctgggatttccaatactagactcggacaatggagctgtgctctgtcaaaacaaa
agcgaccagaccggtttggatttcaggaaaagtgatcagaatgagactgtgctcctcaat
ggagaggaaaaaaggtttgtggataaacctgtagagctgggaaaccttataaatggtgcc
actttttcctctgaggatttaaagtttgatggaggacacttgacttattcggactcgtct
caccgctctgctcgcttcaatgagctgtcctgccgagaagccggtgaggggtttggggaa
atcgctgactacactttgtcgtggttcttgtctcctgactttgctgatgtgatcgggaaa
acatcggcctgtcaggagtcaacttttacgcaggaccccactgtcgagggctcagatggt
gaaccggctgagctagcaagcctcagtgcaccgttttctccttttgaagcttccaattgc
gacagagagatcaacacaaccgatccatttttgatagtggatctcctctcagatgaaaac
ccttgtcttacccaaaagctgtcgcatgagttgatcccacagggttttggtgagaaactt
atagacttgtcctttgaggagcaggaagatctccctccctcactgacaggggaaatggtg
tcacctgacacacgtcacaaaggtttattccctgatcaagtgacagatctgcccataagc
agcagcagccctgctgcacaaggtttacttgaaagtaaccagctccttaacaacatcagc
caatcccaggagggttttgaaggatctgtgcctttgctggatttaaaagttccacatttt
gagagtgacgtcagcctctgccctcctgctgttgcctgcacaggtgctctagaaacacct
acaaaggaatcagaagtggcacaaactattgcagttaaaatccttccagaacaacaaggt
gagaatgacatacttaatctggatctgtcagacagctcatctttcctaacacgacctcca
gctgaagatgcctccactcatgggaatctcacgagtgagaggatttttgtggagaacctt
cctaaggctgtgatggaagtcaaagaagaacatgcgggtgaagatacgacagaattgtat
ctgagctggactgttgaggaggctcacaaggatgactcttgggatttggaaccccaggat
attgttcacaaccgagcttcaatcagtccaaaaactgagcagaatgaggacgagacgctg
aaagacaacaaccaacttgaaaatgcacattctcacaacgaggtttctttagactttttg
gctcagaacacaaagatttcttcctctgaagccgaatggactagtgggccgcctgtggtg
acagtttccctctctaagatggtggaagatgactcactgccaatggtctcatctgtgaac
aagagagaagaagatgcttctccacttaaagacgtctttgatgctttggatcaagatgga
gacggcttcgttcgaattgaggagtttatggagttcgcggctgcctatggggctgatcag
gtcaaggatctgaccaagtttttggatcctagcggtctcggtgtgatcagttttgaagac
tttcaccgtggaatctctgccattagtggaagcccagaaacccagctctacagtgtaaac
tacagtccaggggatggagctgttggctgtcaggaggagtacgatgagcagaatgaggta
acagacagcgcatacctgggctccgagagcacgtacagtgagtgtgagaccttcactgat
gaggacacgggagcccttgtaccccccgagatgcacgaggatgtggagacggatagcggg
attgaggccactctacatgatcctgaagatggaggaaatgggttttccatgaactctgac
ctccacaatacctctctggtaacggtcattggtggggaggaggagcactttgaggacttt
ggggagagtaataattcggagctgccggaaagcaacgaggaagactccgtggtgcatttg
gactcccctctgtcagagccccctgtccaggtcgatggatcatccgtcctctctcccagt
gcacctgcttctctccctgactgcttccagagcttcctcagggaggaggcactggatttt
ttctgtagccagtgtcacaaacaaataagtcgtctcgaggacctctccacccgtctcaat
ttcctagagatgactagttcgggtaagaggctgtccagcaagaaagtggcgcggcacctc
cttcagaacagctccatgactctagataccatgagtgacttgacacgggacatcctggaa
cttgctgacaacgacatcacagacaaggtgctcctcctggagcgtcgggtggcggagctg
gaaaaagagtccgacgcgtcgggggagcagcacactcggctgcgccaggagaacctccag
ctggtgcatcgcgccaacgcgctggaggagcaactgaaggagcaggaggtctacgctgag
gagcagctgcagcaggagaatcggcgccacaaggaggcaataagcaagctggaaagagaa
aaggggctcgagctcgaaaacctgcaggccaggctgcagcagctggatgaagagaacagt
gagctgaggtcgtgtgttccttgtctccgagcaaacatagagagattagaggaggagaag
agaaaacttcacgacgaagctgaggttatgtcacagagactggaggaggagacggaggct
cgcaggaagatggctgacaagctcagtcacgagcgccaccaaaaccagaaagagaaggag
agcactcaagaacttattgaagacctgcgtaaacagctggagcacctgcagctttacaag
ctggaggctgaagcaaagaggggccgaaccccgggggcagggctgcaggagtatcagacg
cgcacacgtgaagccgagctggagcaggagatcaaacggctcaaacaggacaaccgcacc
ctgaaggagcaaaatgacgagttgaacggacagattatcaacttgagcatccagggagcc
aaaaacttaatgtcggcttcattttcggactctctggcagcggagattaactccgtctct
cgcgtggagctgatggaaaccgttcacaaacaagaagagatcaactacagactgcaggac
tacattgacaaaatcatcgttgccatcatggagtgcaacccttccatcctggaggtcaaa
taa
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