Oryzias latipes (Japanese medaka): 101164279
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Entry
101164279 CDS
T02443
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101164279
Membrane trafficking [BR:
ola04131
]
Endocytosis
Others
Others
101164279
Endosome - Lysosome transport
101164279
Endosome - Golgi transport
101164279
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
101164279
NCBI-ProteinID:
XP_023810677
LinkDB
All DBs
Position
1:complement(7229042..7492009)
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AA seq
1180 aa
AA seq
DB search
MEARAGARPDWHLSLGIWVIIAALQHAEAGITCARCPWPVRLHQEELQLTEESLRSVQVE
FRAEDGTLDEVAPQDAALGSGRDRGSGAASALLRAKRSGPELAEFGGADVGAPGERGPAL
DGHRAGRPELCCSREDGGASTPLSSSTFALTGDSAHNHAVVYWSGRNSSVILILTKLYDF
HMGSATESTLWRSTDYGTTYEKMNDKFGLKTVLSYLYVCPSNKRKIMVLTDPEFESSVLI
STDEGASFQKYRLSFFILSLLFHHTEEDWALAYSHDQKLYSSLDFGRKWQLIHEQVTPNR
FYWSVAGLDKEPDLVHMEAHTPDGNVQYITCRAQMCTEANRNYPFPGFIDISSLIVQDDY
IFIQVPTSGRATYYVSYRRDSFIEIKLPKYSLPKDLHIVSTDEKQVFAAVQEWNQNDTYN
LYLSDTRGIFFTLAMENVKTTRGIGGNQMLDLYEVAGIKGMLIANKRQDSQVKTYITYNK
GRDWRLLQAPPTDLDGNEIHCILPFCSLHLQLQMSENPYISGTISTKSSSPGIIVATGNI
GAELSYNNVGMFVSSDAGNTWRQIFEEEHNIWFLDRGGALVAVKQPSVPTRHLWVSFDEG
RQWSQHRFSSVPLFVDGVLVEAGADNQIMTFFGHFSHRSEWQLIKIDYRAIFSKKCTEED
YQTWHLHNQGEPCVMGQKQIYMKRRPGNHCMLGVDYSTVLSAESCICRAHDFECDYGYER
RSDGNCRPSFWFNPFTVSRSCSQGQNFFNSTGYRKVVLNNCTKGVKEIYTARKQQCPNRP
PRGLILTTKDGKLTANRGSNVTFLVHFDEGNSMQTNIQLDFGDGTAVSYSNLSWTEEGIK
HAYKSAGIFRVTALAENTLGYDTTTLFLHVTCPVEHVQLLAPFVVIRNKEVNITAVVLPI
QPRTVTYFWWLGNNTEPLITLDGSISYTFRSEGMHTITVQVSAANTILQDTKTIAVKEFF
KSLLLSFSPNLDEFNPDIPEWRQDVGRVIKKALLQVCDFPGEQLLVAVFPGVPTAAELFL
LPNKNQSEGRKKSEDALEQTSSTIVNALNQNLVEFELKPGVRVIVYNTQLTLAPLVDSSP
RHNSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNQEKEQEMIGSVGQSESTPKI
TLSEFTTSKELMEKELDARVKRGVGNACESTREIPNCTSV
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggaggctcgggctggcgcgcgcccagactggcacttatctctgggcatctgggtgata
atcgccgcgctgcagcacgcagaggcggggatcacttgtgcccgttgtccgtggccggtt
cggcttcaccaggaggaattacagctgacagaggagagcctgaggagtgtccaagtggag
ttcagagccgaggatggcactttggatgaagttgctccacaggatgctgccctcgggtcc
ggcagggatcggggatcgggggcggccagtgctctcctgagagccaagaggagcggtccg
gagttggcagagtttggtggcgcggatgtgggcgcgccgggggagcgggggcccgcgctg
gacggtcacagagcgggcagacccgagctctgctgtagcagggaggacggcggagcgagt
accccgctgagcagcagcactttcgcgctgacgggggactctgcgcacaaccacgccgtg
gtgtactggtcaggaaggaacagcagcgtgatcctgatcctcacaaaactctacgacttt
cacatgggcagcgccacggagagcacactttggagatccactgactacggcaccacatat
gagaagatgaatgacaaatttgggctcaagaccgtcctcagctacctgtacgtctgtcca
tccaacaagaggaagattatggtgttgaccgatccggagtttgagagcagcgtcctcatc
agcaccgatgagggagccagcttccagaagtaccgcctctctttcttcattctaagcctt
ttattccaccacacagaggaagactgggctttggcttacagccatgaccagaagttgtac
agctcactagactttggaaggaagtggcagctcatccacgaacaagtcaccccaaacagg
ttttactggtctgttgcaggcctggacaaggagccagatctggtgcacatggaggctcac
actccagatggaaatgtgcagtacatcacgtgcagagctcagatgtgcacggaggctaac
aggaactatcctttccctgggttcattgacatcagctccctaatagttcaagatgactac
atcttcatacaggttcctacgtcaggacgagccacctactatgtgtcctacaggagagac
tccttcatagaaatcaaacttccaaaatattccctgcctaaggatttacacatcgtcagc
acagatgagaagcaggtgtttgccgcggtgcaggagtggaaccagaacgacacctacaac
ctctacctgtccgacacacgagggattttcttcactttggccatggaaaatgtcaaaacc
accaggggcattggtgggaaccaaatgctggacctgtatgaggtggctggaataaaaggc
atgctgatcgcaaacaagaggcaggacagccaggtgaagacctacataacctacaataaa
gggcgggactggaggctgctgcaggctcctcccacagacttggatgggaatgaaattcat
tgcatactgcctttttgttcccttcatctgcaactccaaatgtcagagaacccatatata
tcaggaaccatctctaccaagagttcttcaccgggaatcattgtggccacaggaaatatc
ggtgcggagctgtcttacaacaacgttggcatgtttgtttcatcagatgcagggaacacc
tggagacagatatttgaagaggagcacaatatttggttcctggacagaggcggagctctg
gttgctgtcaaacagccgtccgttccaaccagacacttgtgggtcagctttgacgagggg
cgacagtggagccagcacagattctcctctgtgccattgttcgtggatggggtcttggtg
gaggccggtgctgataaccaaattatgaccttctttgggcacttcagccatcgctccgag
tggcagctcatcaagatagattacagggccatcttcagcaagaagtgcactgaggaagac
tatcagacgtggcacctgcacaaccagggtgagccgtgcgtgatgggacaaaagcagatc
tacatgaaacggcggcctggaaaccactgcatgctgggagtcgactactccacagtcctg
tcagccgagtcgtgcatttgcagagctcatgatttcgaatgtgattatggatatgaacgg
cgcagcgacggaaactgtcggccctccttctggttcaatcccttcaccgtttccaggagc
tgtagccaaggtcagaacttcttcaacagcacagggtatcgtaaagtggtgcttaacaac
tgtaccaaaggagtcaaagagatttacacagccagaaagcagcagtgtcccaacagacct
cctagaggactcatattgaccacaaaagacggcaaactcaccgccaaccggggcagcaac
gtcaccttcctggtgcactttgatgagggcaactccatgcaaaccaacatccagctagat
tttggcgacggcacagccgtctcctactccaacctgagctggactgaggaggggatcaag
cacgcgtacaagtcggcgggaatcttccgagtcacagcgctagcagaaaatacgctgggt
tatgacacgacaacgctgttcctgcatgtgacgtgtccggtggagcacgtccagcttctc
gccccatttgtggtcatcagaaacaaggaggtaaacatcacagcagtggttcttcccatc
cagccgcgcactgtcacctacttctggtggctcggcaacaacacagagcccttgataacg
ctggatgggagcatctcatacaccttcaggagtgaaggaatgcacaccatcacagtgcaa
gtatctgcagccaacaccattctgcaggacaccaagaccatagcagtcaaagaattcttc
aaatctctacttttatctttctccccgaatctggacgagtttaaccccgacatccctgag
tggaggcaggatgtggggagagtaattaagaaggctctgctccaagtttgcgactttccg
ggggagcagctcttggttgccgtgtttccaggtgttcctacagctgcagagctcttcctg
ttgcccaacaagaaccaatcagagggcagaaaaaagagtgaggatgccctagaacagact
tccagcaccatcgtgaacgcgctgaaccaaaatctggtagagtttgagctgaagcctgga
gtacgcgtgattgtgtacaacacacagttaacactggcacccttggtggactccagcccc
cgacacaacagctctgccatgctcatgctcctctctgtggtcttcctcggcctggctgtc
tttctcatctacaagttcaagagaaaaataccttggatcaacatatacgctgaggtgaac
caggagaaggagcaggagatgatcggttcagtcggtcagagtgagagcacgccaaaaatc
accctgagcgagttcaccacatcgaaagaacttatggagaaggagttggacgctcgggtc
aagagaggagtcgggaacgcctgcgagagcacaagggagattccaaactgcaccagtgtg
tga
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