Oryzias latipes (Japanese medaka): 101164310
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Entry
101164310 CDS
T02443
Symbol
lrrc4b
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101164310 (lrrc4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
101164310 (lrrc4b)
Cell adhesion molecules [BR:
ola04515
]
Immunoglobulin superfamily
NGL family
101164310 (lrrc4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
LRR_R13L1-DRL21
LRRNT
LRR_NXF1-5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
101164310
NCBI-ProteinID:
XP_004071274
UniProt:
A0A3P9HC45
H2L934
LinkDB
All DBs
Position
8:complement(3542178..3586637)
Genome browser
AA seq
729 aa
AA seq
DB search
MRIATLTCLPSPSPFLFLLAQLLLWLLLLPGQELVGAASCPSLCTCSNQASRVICTRQNL
EQVPESISVNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTQVPSYAFEYLSKLRELWLRNNPIEDLPGYAFNRVPSLRRLDLGELKKLDF
ISDAAFVGLVNLRYLNLGMCGLKDIPKLTALERLEELELSGNRLEIIRPGSFQGLGALRK
LWLMHSQVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPILKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADTNVNYTYFTTVTVETEGEGGNSYDLVPINGTFLPGHPGPT
SSELWFSGVPTTDSSLPPGRSSSSPRATRPTFTVPITEPGFSGLDDVMKTTKIIIGCFVA
ITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGPGAGGRGSGISGGSTVMQG
GSSGIGGGQSLRLHHPEIVNIPNLARSEHLNHYYKTHHFNNNMMGLGIGTGSGAGLNNNN
NPCSQSQTLSCSQISASGGGAPTSCTLPSPVPLSQLGLHSSLKGLKGKGQNEPLLFKSGS
KENVQETQI
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctaacctgccttcccagcccctcccccttcctctttctattggcc
cagctgctattgtggctcctcctcctccctgggcaggagctcgtaggagccgcctcctgc
ccctccctctgcacctgttccaaccaggccagccgagtcatctgcaccagacaaaacctg
gagcaggtccccgagagcatatctgttaacacacgatacctcaacctgcaggagaactcc
atacaggttataaagtcggacaccttcaagcacttgaggcatcttgaaatcctccaacta
tccaagaatcagatacgtcagattgaagttggagcgttcaatggcctccccaacctcaac
acactggaactctttgacaaccggctcacacaggtgccgtcatacgcttttgagtatctc
agcaaactgcgagagctatggttgcgcaacaaccccattgaggatctcccaggttacgcc
ttcaaccgtgtaccctcgctgcgccggttggatttgggcgaacttaaaaagttggatttc
atctcagatgcagcctttgtgggcctcgtcaatctaaggtacttgaacctcggaatgtgt
ggattgaaggacattcccaaactgacagcgcttgagcgactggaagagctggagttgtca
ggaaatcggctggagatcatccgtcctggttccttccagggtctgggggctcttcggaag
ttgtggctcatgcattcacaggtgtccgtcatcgaacgtaacgcctttgatgacctgaag
aacctggaagagctgaacctgtctcataattccttgcactcattgccacatgatctcttc
acaccgctccaccagctggagagagtccatctcaaccacaacccctgggtctgcaactgt
gatgtgctttggcttagttggtggttgaaagagaccgtgccaagtaacaccacctgctgt
gctcgctgtcatgctcccccaatcttaaagggcaagtacattggtgagcttgaccagagc
cactttacctgttatgcacctgtcattgtggagccgcccactgacctaaatgtcacagag
ggaatggctgctgagctgaagtgtcgcacaagcacttccacaacgtctgtcaactggatc
acccccaatggcacgttgatgacgcacgggtcctacagggtacggatatccgtcctgcat
gatggcactcttaacttcacaaatgttaccctgcgagacacgggtcagtacacctgcatg
gttaccaacgctgccggcaacaccacggccaccgctgtcctcaacgttactgctgctgat
accaatgtcaactacacctactttacaacggttacggtggagacggagggcgaaggaggt
aacagttatgacctggttccaatcaatgggaccttccttccgggtcaccctggtcccacg
tcctctgaactgtggtttagtggtgttcccaccacagattcctcccttcctcctggcaga
tcctcttcctcccctcgtgccactcgaccaaccttcactgtgccaatcactgaaccgggc
ttctccggtctggatgatgtgatgaagaccaccaagatcattattggctgctttgtagct
attacttttatggcagcagtgatgctggtggtgttctacaagttgaggaagcagcatcag
ctacacaaacatcatgggccagctcgggccatcgagatcatcaacgtggaggatgagctg
ggacctggagccggcggtcggggcagtggcatctccggaggatccacagtgatgcagggt
ggaagcagtggaataggagggggccagagcctcaggttgcaccatccagagatagtcaac
atacccaacctggctcgatcggagcacctcaaccactattacaaaacccaccactttaac
aacaatatgatgggcctgggcattggcacgggttcgggtgcgggccttaacaacaacaac
aacccgtgctcgcaatcacagaccttatcctgctcccagatttcagctagtggtggggga
gcgcccacaagttgcaccctgccctcacctgtacccctttcccagttgggccttcacagt
tctctgaaaggcctgaagggtaaaggccagaacgagccactactttttaagagtggctca
aaggaaaatgtgcaagagactcagatctaa
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