Oryzias latipes (Japanese medaka): 101164354
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Entry
101164354 CDS
T02443
Name
(RefSeq) general transcription factor IIF subunit 2
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101164354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101164354
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
101164354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Motif
Other DBs
NCBI-GeneID:
101164354
NCBI-ProteinID:
XP_004081735
UniProt:
A0A3P9K4I1
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All DBs
Position
21:17048653..17098330
Genome browser
AA seq
253 aa
AA seq
DB search
MSNKVEVNLTGVRQSKGVWLVKVPKYLSQQWDKATEKGEVGKITIGKKQGKTEVCFSLSE
ELAALGSAEEKDASVQVPRDHPFTMQTVGGQTMAVFSQSDTDGISLEGTVVHRAECRPNV
SEDYMKIKRLQSESVKPQRLSQQLDRAITTVFKPVANHDFNVEFEKKKKSEGKMVRAERQ
VVMDMLFSAFEKHQYYSFKDLVDITKQPVTYLKEIVREIGVCNRKGAHKSSWELKPEYQH
YRADDEEEEKQDS
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaaagtggaggttaacttgaccggagtcagacagagcaaaggcgtgtggctc
gttaaggtacccaaatacttatcacagcaatgggacaaagccacagaaaagggagaagtt
ggaaaaatcacaattggcaaaaaacaaggtaaaactgaggtgtgtttcagtctgagtgag
gaactggcggccctgggctctgcggaggagaaggatgcatcagtgcaggtccccagggat
catcccttcactatgcaaacagtgggcggacaaaccatggctgtcttcagccaaagcgac
acagatggaatcagcttggagggaacggtggtgcacagagcggaatgcagacccaacgtc
tctgaagactacatgaagatcaaacggctgcagagcgagtctgtcaagccccagcgtctg
tcgcagcagctggaccgggccatcaccactgtcttcaagcctgtggccaaccatgatttc
aatgtggagtttgagaagaagaagaagtctgaagggaagatggtgagggcggagcggcag
gttgtgatggacatgctcttctctgcttttgagaagcaccagtactatagcttcaaggac
ctggtggacatcaccaaacaacccgtgacctacctcaaagaaatcgtgagggaaatcgga
gtatgcaaccgcaaaggagcacacaaaagcagctgggagctgaagccggagtaccagcat
taccgcgctgacgatgaggaagaggagaagcaagactcatag
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